Caretta caretta (Loggerhead turtle): 125633587
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Entry
125633587 CDS
T09292
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125633587 (TRERF1)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
125633587 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
125633587
NCBI-ProteinID:
XP_048699008
LinkDB
All DBs
Position
3:40583397..40725547
Genome browser
AA seq
1182 aa
AA seq
DB search
MGDQQLYKPNHTANSNENLYYQPHPMNSLPPINHSYGTSGMDTSQASPLSPQFPQDSRDS
IALNVGSKNIGSVDSSRQTSWTHTGSGNHVPVRNNQNAMWSPLGQSESADGYQYSYSQGN
ELRSQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHAPSSVMDNASDSALRQLLSQK
PTVEQQSVTSTVQRYQQGQQQVHQNFASTQQKQQMQVMQHQQQLYYDYQQHLSQLQMHSA
MQQGQPHVQQMQSQQLLPQQIQQLQQTQYYMPQQPQQGQQRLSIQEIQQQQQQSRQQQQR
QCPMQIAQYYQTQPVMQQLQLQQQQQQQMQLHLPTYHRDSDPKTVHETHQYSQDQAHSVQ
LIQLGTMPQYFYQDTQQQYRHLYPQSALQQQQQQDDTDQQKQYQNDSRSQALMNSHVGLS
MAEAMEDTARQEINSVGNAGPHRTLLAPSGVHLNNKGSQQESPSAVWPQQIQLSDGRLQP
LSPEPSGTNKGTFPERSHIKSKLTCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGE
KLPQQQPPKEVDSIAPIVMPVSVPVKLLSPEPSAQSATNSTTIKDKPANSVSDDEMPVLM
KMTYSPPCSPKVATPCSSSELSRKQHQSAAKLEDDFKSLQDKKKYRHRPEPLFIPPPSFN
FSASYSGATLYQSQLRSPRILGDHLLDRTHEFPPYTPPPMLSPVRQGSGLFSSVITSSHN
ASHPQLPLTPLTPTPRVLLCRSNSIDGSSIPVTPGPGEQTVDIEPQINIGSRFQADIPEL
QDRSSMGRDMHKATLVWKPWPELENKVFQQRVEDLLNMCCSSVLPGGGTNSEYALHSLFE
SKGDIMVALEMLLLRKPVRLKCHPLANYHYAGSDMWTPLERRLFNKALSTYSKDFIFVQK
MVKSKTVAQCVEYYYTWKKIMHLGRKHRTRLAEIRDDCLTSGEEEDLEDEEEMEEERKYV
KEEESEMQKSPEPPPIALGAPVDLPPLQSLTFSAASFICEMPNCGAVFSSRQALNGHARI
HGGTNQVTKPRCTVPGTKQKSGTQSGYCSVKSSPAHSTTSGETDPTTIFPCKECGKVFFK
IKSRNAHMKTHRQQEEQQRQKAQKAAVAAEMAATIARTTGPVGHGVIPLDHLSLIKQVEH
VDDLEDDVVQELGDVMEETEVMDADLLLDEEDADLLQDDAEL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcagcagttgtacaaacctaaccacactgccaacagcaatgagaatttgtat
taccaaccacacccaatgaactctctcccccctataaatcacagctatggaacatcaggc
atggacacttctcaggcttctcccctctctccccaattcccccaggattccagagacagt
atagctttgaatgtaggttcaaaaaacattgggtcagtggactcctctagacaaacaagt
tggacacatactggctcaggaaaccatgtcccagtaaggaacaatcagaatgcaatgtgg
agcccgttagggcagagtgaatctgctgatggataccaatattcctattctcaaggcaat
gaacttcggtcacaaaaacttactagtggagttttacataaattggactcctttacacaa
gtatttgctaaccaaaatttaagaattcaagtcaacaatatggctcaggtcttgcatgcg
ccgtcttcagtgatggataatgccagtgacagtgcacttagacagctgctgtctcagaag
cctactgttgagcaacaatctgtaacttccaccgtgcaaagatatcagcaagggcaacag
caagtacaccagaattttgcaagcactcaacaaaagcagcaaatgcaagtcatgcagcac
caacaacagttgtattatgattaccagcaacacttatctcagctgcagatgcattctgcc
atgcaacaaggacaaccacatgtgcaacaaatgcagtctcagcagctgttaccgcaacag
atacaacagttgcagcaaactcaatattatatgccgcaacagccacagcagggacagcag
cggctctcaatccaagagatccagcagcagcagcaacaaagtcggcagcaacagcagcgg
cagtgtccaatgcaaatagctcagtattatcaaacacaaccagttatgcagcagttacag
ttgcagcagcagcagcagcaacagatgcagctgcatcttcctacctatcatagggattcc
gaccccaaaacggtgcatgaaacacaccagtactcccaggatcaagctcattctgtacag
cttatacagttgggaacaatgcctcagtatttctatcaggatacacagcagcagtatagg
catttgtacccacaaagtgcattgcaacaacagcagcagcaagacgacaccgatcagcaa
aagcaataccagaacgacagcaggtctcaagctctgatgaactcccatgttggcctgagt
atggcagaggcaatggaggatactgcacggcaggaaattaattctgtaggtaacgctggc
cctcatcgaactcttttagcaccatcgggtgtccatctaaataacaaagggtcccaacaa
gagtctcctagtgctgtttggcctcagcagattcagctgtccgatggcagactgcagcca
ctgtcccctgagccaagtggcacaaacaaaggaacatttcctgagagatcccatataaag
agcaagctaacatgttcaatatgcttgaaggaatttaagagtttaccagccctaaatggt
cacatgagatcacatggaggagtaagagcatctcctaattttaaacaggatgaaggagag
aaactgccacaacagcagccgcctaaagaggtggatagcatcgcacctatcgtcatgcct
gtttctgtccctgtaaagcttctgtcgcctgagcccagtgcgcagtctgctaccaacagt
accacaatcaaagacaagcctgccaattctgtgtcagatgacgagatgccagttctcatg
aagatgacttactctccaccgtgcagtccaaaagtggccaccccctgctcatcttctgaa
cttagcagaaaacagcatcaaagtgctgcaaaattggaagacgacttcaaatccctgcag
gacaagaaaaaatatcgacatagaccggaaccactcttcatacctcctccttccttcaac
ttcagtgcatcctactcaggagctacgctgtatcaaagccagcttcgctctccccgcatc
ctaggagaccatcttctagacaggacacatgagtttcctccctataccccaccacctatg
cttagcccagtacgccaaggatctgggctcttcagcagcgttatcacatcatctcataat
gcatctcacccccagctgccgcttactcctttgacacccactccacgggtgctcctatgt
cgatctaatagtattgatggaagcagcattccagtgactccagggcctggagaacagact
gttgatatagaaccacagatcaatattggatcaagattccaggctgatattcctgaacta
caagaccgatcatcaatggggagagatatgcacaaggcaactttggtttggaaaccatgg
ccagaactggaaaacaaagtcttccaacaaagagtggaagacctcttaaatatgtgctgt
tcaagcgtgttacctggtggaggaactaattcagaatatgcattgcactccctctttgag
tccaaaggggatattatggttgccctggaaatgctgctgttgaggaagccagtaagattg
aagtgtcatcctttggcaaattaccattatgctggatctgacatgtggacacctctagaa
agaaggctgtttaacaaagcattatccacttacagcaaagattttatttttgtacagaaa
atggttaagtctaagacagttgcacagtgtgtggaatactactatacctggaagaaaatc
atgcatctgggacggaaacacagaacacgtctagcagaaataagagatgactgcctgaca
agtggggaagaggaagatttagaggatgaggaggagatggaagaagaaagaaaatatgta
aaagaagaggaaagtgaaatgcagaagtctcctgaaccaccacctatagctcttggtgca
cctgtagacttgccgccccttcaaagtctcacgttttctgcagcctcttttatctgtgaa
atgccaaactgtggtgctgtgttcagctccagacaagcactaaatggccatgctcgaatt
catggtggtacaaaccaggtgacaaaaccacgatgcactgttccaggtacaaagcaaaaa
tctggcacgcagagtggatactgctccgtcaagagctcccctgcccacagcacaacaagt
ggcgagacggacccaacgacaatttttccttgtaaagagtgtggcaaggtgtttttcaaa
atcaaaagtcgcaatgctcatatgaagactcacaggcaacaggaagaacagcaaaggcag
aaggctcagaaagctgctgttgcagcagaaatggcagccactattgcaagaactactggg
ccagttggacatggtgtgatccctctggatcatttgagtttgattaaacaggttgagcat
gtagatgaccttgaagatgatgttgttcaggagttaggagatgtcatggaagagactgaa
gtcatggatgctgacctcttgttggatgaagaagatgcagatttacttcaggatgatgca
gagttgtaa
DBGET
integrated database retrieval system
