Caretta caretta (Loggerhead turtle): 125633679
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Entry
125633679 CDS
T09292
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125633679 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125633679 (NVL)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125633679 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
AAA_2
AAA_28
TIP49
NPHP3_N
Mg_chelatase
RNA_helicase
nSTAND3
AAA_17
AAA_33
Rad17
NACHT
TsaE
Viral_helicase1
nSTAND_NTPase5
AAA_3
IstB_IS21
ABC_tran
AAA_18
Zeta_toxin
Parvo_NS1
Cytidylate_kin2
Sigma54_activat
Sigma54_activ_2
DUF815
ATPase
Motif
Other DBs
NCBI-GeneID:
125633679
NCBI-ProteinID:
XP_048699258
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All DBs
Position
3:complement(50164537..50236672)
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AA seq
859 aa
AA seq
DB search
MRGRAGSFADPRLKQRIKQYLSSNKCGRYVDIGILAADLQKTYSAEYGRRKRNAFRIQVE
KVFGIISNEREFEDLTALENEHVAKRARHRREENEDVESYTDDSDDDDYSEHLSTNHLNS
SLLTLYRKGDPDSLLATPKNEPTETSTPAQVTVPRTSALPSGTPLDTRISEGGWFIDKTP
GRKEDNFSIDLCEEEEERKQISEKSKDLSFLESEGKKTKSKRRKRRKEESQDVDEEIESV
LRKQKVKTKGLELQFPLVKFDDVGGSDETLKEVCKMLIHVRHPEVYNHLGVVPPRGFLLH
GPPGCGKTLLAQAIAGELGLPMLKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFID
EIDAITPKREVASKDMERRIVAQLLTCMDDLNNLAATAQVLVIGATNRPDSLDPALRRAG
RFDREICLGIPDEAARERILQTLCRKLRLPESFDFHYLAHMTPGYVGADLMALCREAAMC
TVNRVLIKLEEQKWKGVRAGEAMTEQSLETGTEALVEKDIKHPELPVKDELQRLLELLKE
QNPLLEEQLQKLCIEMNDFIVALSSVQPSAKREGFVTVPDVTWADVGALEDIREELTMAI
LAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG
ESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDREAGASVRVVNQLLTEMDGLENRQQ
VFIMAATNRPDIIDPAILRPGRLDKTLYVGLPLPVDRLAILKTITKDGTRPPLDVDVNLE
EIAYDRRCDCYTGADLSALVREASVCALRQEMALQNGKSKKGEIKISRKYFEEAFKKVKS
SISRKDQAMYEELRQSLSK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccgcgcggggagttttgcggaccctcgcctgaagcagcgaatcaagcagtac
ctaagcagtaataaatgtggccgatatgtggacattggaattttagcagctgatttacag
aaaacttacagtgcagaatatggacgaagaaaaagaaatgcctttcgaattcaggttgag
aaagtgtttggtataatcagtaatgagagagaatttgaagatttaacagctttagagaat
gaacatgtggcaaaaagagcaagacacagacgagaagagaatgaggatgtggaaagctac
acagacgactcggatgatgatgattactcagaacatctatccacaaatcacttgaacagc
tctctgctgaccttataccggaaaggagatcctgattctcttctggcaactccgaagaat
gagccaacagaaaccagtacccctgcacaagtgacagtacccagaacaagtgctcttcca
tctggcaccccacttgatactaggatctctgaaggtggatggtttattgataaaacccca
ggtagaaaagaagacaacttctcaattgacctgtgtgaggaagaagaggaaaggaaacag
atttctgagaaatcaaaagacctttcttttttggagagtgaaggaaagaagacaaagagc
aagagacgaaaaagaaggaaagaggaatctcaagatgtagatgaagaaatagaatctgtt
ttgcgtaagcagaaagttaaaactaaaggactagagctgcagttccctttagtgaaattt
gacgatgtgggaggcagtgatgaaactctgaaggaagtgtgcaagatgctgatacacgtg
cgtcaccctgaagtatacaatcacttaggtgtggtcccacctcgaggatttcttttacat
ggaccaccagggtgtggaaaaacattactagcacaggcaattgctggggaacttggactg
ccgatgctcaaagtagccgctactgaaattgtatcaggagtctctggggagtctgaacag
aagctgagagagttgtttgaacaagctgtgtccagtgctccatgcatccttttcatagac
gagattgatgcaatcaccccaaaaagagaagtcgcctcaaaagacatggagcggagaatt
gtcgcccagcttctaacctgtatggatgacctgaataatctggctgccactgctcaggtc
ctagtcattggagctactaacagaccagactcgttagacccagcattgaggcgcgctgga
agatttgatcgagaaatttgtctagggattcctgatgaagcagctagagagagaattcta
cagactttgtgtcgaaaacttaggctccctgaatcttttgattttcattatttagcccat
atgactccaggctatgtaggtgctgatttgatggcactttgtcgtgaagcagctatgtgt
acagtaaacagggtcctgataaagttggaggagcagaaatggaaaggtgtacgggctgga
gaagcaatgactgagcaaagcttggagactggaacagaagcactggtggaaaaggatatt
aaacatccagagcttcctgttaaggatgaattgcagaggctgctagagttgctaaaggag
caaaatcccctgcttgaggagcagctgcagaagctctgcatcgaaatgaatgatttcatt
gttgcactgtcttcggtgcagccctctgctaagagagaaggctttgtcaccgtccctgat
gtgacatgggcggatgttggagccctggaggacattcgggaggagctcactatggcaata
ctggcacctgtgcggaatccagagcaattcaaagctcttggcctgacaactccagctggt
gttctacttgcagggcctcctgggtgtggcaaaacacttctggcaaaggctgtagcaaat
gagtctggactgaacttcatctctgtgaaaggtcctgaactgttaaatatgtatgttggc
gaaagtgagcgtgctgtacgtcaggtattccagcgggccagaaattcagccccttgcgtt
atattctttgatgaagttgacgctttgtgccctcggagatcagaccgtgaggcaggtgcc
agtgtccgtgtggtaaaccagttgctaacagagatggatggtctggaaaatcgtcagcag
gttttcattatggctgctaccaacaggccagacataattgacccagctatcctacgccct
ggcagactggataaaacactctatgtgggtttgccactaccagtggatcgacttgctatt
ttaaagaccattaccaaagatggtacccgaccccctttggatgttgatgtaaaccttgaa
gaaattgcttatgatcggcgttgtgattgctatacgggggcagatctttctgctctagtg
cgtgaagcttcagtttgtgccttgagacaggaaatggccctacagaatgggaagagcaag
aaaggagaaatcaagattagccgaaaatactttgaagaagcatttaagaaagtgaaatca
tctatatcaagaaaggatcaagcaatgtatgaagagctgcgtcagtcgctgagcaaatga
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