Caretta caretta (Loggerhead turtle): 125633777
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Entry
125633777 CDS
T09292
Symbol
CNTN5
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125633777 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccay00537
]
125633777 (CNTN5)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
Contactins
125633777 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccay00537
]
Others
125633777 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
Pur_ac_phosph_N
Ig_6
C2-set
Motif
Other DBs
NCBI-GeneID:
125633777
NCBI-ProteinID:
XP_048699487
LinkDB
All DBs
Position
1:28136400..29102391
Genome browser
AA seq
1100 aa
AA seq
DB search
MMWSSWRLILFLSLTGCLSEYSAAVPGLPTSYAAILRIKSASSSSALFNSKNRPRLSSPS
LGSISSPGWRGTAQHYHSPTNLNHFSEAFKHDESVDYGPVFIQEPDDVIFPTDSEEKKVS
LNCQARGNPAPIYRWLRNGTEIDIESDYRYSLIEGSFIINNPNEAKDSGQYQCLTTNVFG
SILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVA
EDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEP
KIEVHFPYTVTAAKGTTVKMECFALGNPVPTISWRKVNDHNPSKARLRKSQAVLEIPNVQ
LEDAGMYECKAENSRGRNVFRGQLQVYTYPHWVEKLNNTQLDSGEQLRWECKASGKPRPT
YHWLKNGVPLWVQSRVEMVNGVLMIHSVNLSDAGMYQCLAENKYGTIYASAELKILASAP
TFALNQMKKTLIITRGQEVVIECKPQASPKPTITWKKGDKAVRGNKRITVLPDGSLQILN
ASKSDEGRYLCQGENVFGSAETVASVFVKEPTKIDLTPKRTELTVGESIVLSCKAIHDNT
LDVTFYWTLNGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRIQTTADSVS
DEAELLVRGPPGPPGIVIVEEITETTATLSWSPGADNHSPISTYNLQARSPFSLGWQTVK
TVPENISGDMESAVAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTSEAVPKTAPANV
SGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDES
VPPLTPFEVKVGVYNNKGDGPFSPIAVICSAEGEPSAAPTDVKATGLSVSEILVAWKHIK
ENLGRPQGFEVGYWKDMEQEEAAEKVKTEGNESSIILTGLEGNTLYHLTVRAYNAAGYGP
PSSTVRAATKKSPPSQAPTNIMWMQDGSHVSLGWEPVRPLANESDVMGYKVLFRQEGHSN
SQVIETQKTSAVVLLPDVGVYIIEVCAVSEGGDGTASSQIRVPSFSGGKVTSSQSTLHAL
STSSSSVTLLLALMVPSTSW
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggtcatcatggagactgattctgtttctgtcactcactggatgtctttcagaa
tattcagcagctgttccaggcctcccaacttcatatgctgctatcctaagaattaaatct
gccagttcatcttcagcactctttaattcaaagaacaggccacgattaagcagcccttca
ttaggaagcatatcttcaccaggctggagaggaacagcacaacactatcactcaccaaca
aacctcaatcacttctcagaggccttcaaacatgatgaaagtgtggattacgggccggtg
tttatacaagagccggatgatgtgatttttcctactgattctgaagagaagaaagtgtct
ctgaattgccaagcacgaggaaaccctgctcctatttacagatggctacgaaatggaact
gaaattgatattgaaagtgattaccgctacagtttgatagaaggaagttttatcatcaac
aatcccaatgaagcaaaggattctgggcaatatcaatgtttaaccaccaatgtgtttgga
agtattttgagcagagaggccacccttcagtttgcatatctgggaaattttagtggccgg
acaagaagcgcagtctcagtacgtgaaggtcaaggggttgttctgatgtgctctcctcca
cttcattcaccagagataatctacagttgggtatttaacgaattcccatctttcgtggca
gaagatagcagacgcttcatctcccaggagaccggaaatctctacatctccaaggtgcaa
acatctgatgttggcagctatatctgcctagtaaaaaacacagtgacaaatgccagagtt
ctgagtcctccaacaccacttaccctgcggaatgatggtgtgatgggggaatatgagccg
aaaattgaggtccattttccttacacagttacagctgctaagggaactaccgttaagatg
gagtgctttgcgctgggcaaccctgttccaacaatctcgtggaggaaagttaatgatcat
aatccaagtaaagcccgtctgagaaagtcccaagctgttcttgaaatacctaatgtgcag
ctagaggatgcagggatgtacgaatgtaaagctgaaaactcgcgtggaaggaatgtcttc
agaggacagctacaagtatacacctacccacattgggtggagaagcttaacaatactcaa
ttagacagtggagagcagctccgatgggaatgcaaagcctctggaaagccacgacccacc
tatcattggctgaagaatggagtccctctttgggtacagagcagggttgagatggttaat
ggtgtactgatgatccacagtgtgaatctctcagatgctggaatgtaccaatgcttagca
gaaaataaatatggaaccatttatgccagtgctgagctgaagattttagcctcagctccc
acttttgcactaaatcagatgaagaaaactttaattattaccaggggccaagaagttgtc
attgagtgcaaaccacaagcctctccaaaaccaaccatcacttggaagaaaggagacaaa
gcagtaagagggaataagaggataactgttcttccagatgggagcctacaaatcctgaat
gcttccaaatctgacgaaggaaggtatttatgccaaggagaaaatgtgtttggttcagca
gaaactgtagcctcagtatttgttaaagaaccaacaaagatagacctgactcccaagagg
actgagttaaccgttggagaaagcattgtcctcagttgcaaagcgattcatgacaacaca
ctagatgtgactttctactggactttgaatgggcagccaattgattttgagaaggaaggc
ggacattttgaaagcatcagggcacaagcatcctctgcagatttaatgatcaggaacatc
cttctgatgcatgctgggagatatggctgcaggatacagaccacagcagacagtgtgtca
gatgaggcagaacttcttgttaggggtcctcctggtcccccaggaatagtgatagttgag
gaaattacagaaaccacggcgacgctttcctggagtcctggggcagacaaccacagccct
atctccacatacaacttacaagcacgtagcccattttcacttggctggcagactgtaaaa
acagttccagagaacataagtggtgacatggaatctgctgtggcagtagaactgaaccca
tgggtggaatatgaattcagagttgtagcaaccaacaaaatcgggactggggatccaagt
gcaccatctcgagtgatcagaaccagtgaagcagttccaaagacagcaccagctaatgta
agtggcagaagtggaagacggcatgaattagtaatagcatgggagccagtatcagaagag
tttcagaatggggaaggatttggatacattgtggctttcagaccgaatggaacacgaggg
tggaaagaaaaaatggtgacatcctcagatgcttcaaagttcatctatagggatgaaagt
gtgcctcctctgactccctttgaggtgaaagttggtgtatataataacaaaggagatgga
cccttcagccccattgcggtcatctgttcagctgagggagaacccagtgcagctcctact
gatgtcaaggctacaggtttgtctgtatcagagattctggttgcgtggaaacatattaaa
gaaaatctaggaagaccacagggatttgaggttggttactggaaagatatggagcaggaa
gaagcggcagaaaaagtcaaaactgaaggaaatgagtcatccatcattttgacaggatta
gaaggaaacacattatatcacctaacagtgagggcgtacaatgctgcgggatatggacca
ccgagtagcacagtccgtgcagccactaagaaatcccctcccagccaggcaccaaccaat
attatgtggatgcaagatggctctcatgtgtctctgggatgggagccagttagacctcta
gcaaatgaatctgatgtaatgggatacaaggtcttgtttaggcaagaaggccacagcaat
agtcaagtaattgaaacacagaaaacctctgcagtggtacttcttcctgatgttggtgtc
tatatcatagaggtttgtgcagtcagtgaaggaggggatgggacagccagctcccaaatc
agggtaccgtctttttcaggtggaaaagttacaagctctcaatccactttacatgctctc
tctacgtcctcgtcatctgtaacattgctcttggcactgatggtcccttccacctcatgg
tga
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