Caretta caretta (Loggerhead turtle): 125633821
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Entry
125633821 CDS
T09292
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125633821 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccay04812
]
125633821 (SPAST)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
125633821 (SPAST)
Membrane trafficking [BR:
ccay04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125633821 (SPAST)
Cytoskeleton proteins [BR:
ccay04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125633821 (SPAST)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_14
MIT
IstB_IS21
AAA_24
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
125633821
NCBI-ProteinID:
XP_048699599
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All DBs
Position
3:complement(65503695..65566723)
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AA seq
616 aa
AA seq
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MNSPGGRGKKKGSAGSSSPPQAPRACPSAPAGPAPPLQQQQAAAAGAAAASPHKRNLYYF
SYPLFAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGRAGAGDAPEPGGAPETVRACH
KRAFECISVALRIDEEERAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSK
MMTNLAMAKDRLQLLEKLQAVLQIPKPQMEVYNDSTNVACRNGHLQSECGAVPKKKDPLT
HTSNSLPRSKTVAKTGSTGLSGHHRTPSYSGISTFSVSRQGANPATSTHKATSKNSRTNK
PSTPTTAARKKKDLKIFRNVDSNLANLILNEVVDNGPAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPPRGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRI
LVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSLSPQT
LDAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggcagagggaagaagaagggctcagccggctccagctccccgccc
caagcccccagggcctgcccctccgccccggccgggccggctccccccctgcagcaacag
caggcggcggcggcgggggcggccgcggcgtctccccataagcggaacctctattacttc
tcctacccgctcttcgccgccttcgcgctgctccgcttcgtcgccttccagctcgggctg
ctcttcgcctggctctgcgagcgcctctcccggggcgccctcatggccgccaagggcagg
gccggggccggcgacgcgcccgagcccggcggggcgcccgagacggtgcgagcctgccac
aagcgagccttcgagtgcatctccgtggcgctgcgcatcgatgaagaggagagagcagga
caaaaggaacaagctgttgaatggtataagaaaggaattgaagaactggagaaaggaata
gctgtcttagttattggtcaaggtgatcagtgtgaacgagctcgacgtctgcagtctaaa
atgatgacaaatttggctatggcaaaggatcgtttgcagcttctagagaagctgcaggca
gttttgcaaattcccaagccgcaaatggaggtctataatgacagtactaacgtggcatgc
cgcaatggacatctccagtcagaatgtggagctgttccaaaaaagaaggatccattaacg
cacacgagtaactcccttcctcgttcaaagactgttgcaaaaacgggatccacaggcctt
tctggtcatcatagaacccctagctatagtgggatatccactttctctgtatctagacag
ggagccaatcctgcaacttcaacacacaaggctacttcaaaaaatagccgaacaaacaag
ccttctactcctacaactgctgctcgaaaaaagaaagacttgaagatatttagaaatgtt
gatagtaatcttgctaatctaattctgaatgaagttgttgacaatgggccagctgtcaaa
tttgacgatatcgctgggcaagagctggctaaacaagcactgcaagaaattgttatcctt
ccctcccttagacctgagttatttacaggacttagagctcctccacgtggattattgctg
tttggcccaccaggaaatgggaagactatgctggccaaagcagttgctgcagaatcaaat
gcaaccttctttaacataagtgctgcaagcctaacttcaaaatatgtaggtgagggagag
aaactggtgcgtgctctttttgcagtagccagagaacttcagccgtctataatttttata
gatgaagttgatagccttttatgcgaaagaagagaaggtgaacatgatgctagtaggcgt
ctaaaaacagaatttttaatagaatttgatggcgtacagtcttctggagaggacagaata
cttgtaatgggggcaactaataggccacaggagctggatgatgctgttctcagacgattc
accaaacgcgtgtatgtatctttaccaaatgaagagacaagattgattttactaaaaaat
cttttaagcaagcaaggaagtccattgacccaaaaagagcttgcacagctagctagaatg
acagatggatactcaggaagtgacttaactgcattagcaaaggatgcggcactgggccct
attcgagaactaaaaccagaacaggtaaagaatatgtctgccagtgagatgaggaatatc
agattgtcagatttcaccgagtctttgaagaagataaagcgcagtctgagccctcaaacc
ctggatgcatatattcgctggaacaaggactttggtgatactacagtttga
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