Caretta caretta (Loggerhead turtle): 125633947
Help
Entry
125633947 CDS
T09292
Symbol
THBS2
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04145
Phagosome
ccay04510
Focal adhesion
ccay04512
ECM-receptor interaction
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125633947 (THBS2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125633947 (THBS2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125633947 (THBS2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125633947 (THBS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125633947 (THBS2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125633947 (THBS2)
00536 Glycosaminoglycan binding proteins [BR:
ccay00536
]
125633947 (THBS2)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Phagocytosis
Opsonins
125633947 (THBS2)
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125633947 (THBS2)
Exosomal proteins of colorectal cancer cells
125633947 (THBS2)
Exosomal proteins of bladder cancer cells
125633947 (THBS2)
Glycosaminoglycan binding proteins [BR:
ccay00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125633947 (THBS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_ADAMTS
EGF_3
TSP1_CFP_C
Laminin_G_3
cEGF
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125633947
NCBI-ProteinID:
XP_048699932
LinkDB
All DBs
Position
3:79690542..79740126
Genome browser
AA seq
1182 aa
AA seq
DB search
MPGVMLQRSRLLWLIVLLTLWASSNAQDGNKEDETTFDLFQISNINRKTIGAKLFRGPNP
TVPAYRFIRFDFIPPFNPEKFKQILKLIRKNEGFILSATLRQDRQSRGTIIALEGPGISQ
RQFEIISNGRANTLDLIYWADGSQNVISLEDVDLADSQWKNITVQVTGENYSLYVGCDLI
DSFILEEPFYEQLKAENSRMYVTKGSIRENHFRGLIQNIYLIFDTSVEDVLRNKGCQRSQ
TTEVNTINESTEILHLNPAVTTEYVGEKTEKKMEFCDRSCEELGTMFTELTGLRIVVNNL
VDNLQKVSEENQIMWELIGPNKTLKNQSVCWQDGRAFSDNENWVVDSCTKCTCENSKTVC
HQITCPAVFCANPSFIEGECCPVCFHSKDSEDGWSPWSEWTECSVTCGSGTQQRGRSCDV
TSNTCVGPSIQTRTCSLGKCDNRIRQDGGWSHWSPWSSCSVTCGIGNITRIRLCNSPIPQ
MGGKICKGSGRETKECEGVPCPVNGRWGPWSPWSACSVTCGGGIHERSRLCNSPEPQYGG
KKCVGDVKQHDICNKNDCPIDGCLSNPCFPGAECNSYPDGSWSCGPCPAGYLGNGTVCED
LDECIAVPDVCFKVNQVHRCVNANPGFHCLPCPPRYKGNQPFGVGLEAAKTEKQVCEPEN
PCLDMTHSCHKSAECIYLGHFSDPMYKCECRTGYAGDGRICGEDSDLDGWPNSNLVCAAN
ATYHCMKDNCPHLPNSGQEDFDKDGKGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYDKD
EVGDRCDNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQRDTDGDG
VGDHCDNCPLVHNPDQTDIDNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNSNQADHDKD
GKGDACDSDDDNDGVPDDRDNCRLMFNPDQKDSDGDGRGDICKDDFDNDSVPDIYDVCPE
NIDISETDFRKFQMVPLDPKGTAQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFTSVDF
SGTFYVNTDRDDDYAGFVFGYQSSSRFYVLMWKQVTQTYWEDKPTRAYGYSGVSLKVVNS
TTGTGEHLRNALWHTGNTPGQVRTLWHDPKNVGWKDYTAYRWQLIHRPKTGLIKVLVYEG
KQVMVDSGPIYDKTYAGGRLGLFVFSQEMVYFSDLKYECRDF
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagttatgctacagaggagcaggctgttgtggctaattgtcttgctaactttg
tgggcttcttcaaatgctcaggatggtaacaaggaagatgagactacgtttgacttattt
caaatcagtaacataaaccgaaagacaattggagcaaaattatttcggggtccaaatccc
accgtcccggcatatcgtttcatccgatttgacttcatacctccatttaacccagagaaa
ttcaaacagattcttaaactcatccggaaaaatgagggctttattctttcagccacccta
aggcaggacaggcaatccagaggtactatcattgctttagagggccctggcatctctcag
agacagtttgagattatttccaatggccgagccaataccctggaccttatctattgggca
gatggctcccagaatgtgatttccttggaagatgtggacctagcagactcacagtggaag
aacatcacagtgcaagtaacaggagagaactacagcctctatgttggttgtgaccttatt
gacagcttcatcctggaggagcctttctatgagcagctgaaagcagagaacagtagaatg
tatgtgacaaaggggtccattcgagagaaccatttcaggggtctaattcaaaatatttat
ttaatatttgatacttcagtagaggatgttctgcgtaacaaaggatgtcagaggagccag
acaactgaagtgaacactatcaatgagagtactgaaatccttcaccttaaccctgctgtc
accacggagtatgttggtgaaaagacagagaagaagatggagttctgtgaccgctcctgt
gaagagctgggaactatgttcactgagctcactgggttgcgtattgttgttaacaattta
gttgataatcttcaaaaagtgtctgaggagaaccaaattatgtgggaattgattgggcct
aacaaaactctaaagaaccagtcggtctgctggcaggatggccgtgccttttcagataat
gaaaactgggttgtggatagctgtaccaaatgtacctgcgagaattctaaaaccgtatgc
catcaaatcacctgcccagcagtgttttgtgccaatccatcatttattgaaggtgaatgc
tgtcctgtctgctttcattccaaagacagtgaagatggttggtctccatggtctgagtgg
acagagtgctcagtgacatgtggctctggaacacagcagagaggacggtcatgtgatgtc
actagcaacacttgtgtaggcccgtccatccagacaagaacgtgtagccttggcaaatgt
gacaatcgcatacgtcaagatggtggctggagtcactggtctccttggtcttcctgttct
gtgacctgtggaataggcaacatcactcgcatccgtctctgcaattcccccatcccacag
atgggtgggaaaatttgtaaaggaagtggccgtgaaacaaaagaatgtgaaggagtccca
tgtccagttaatggcagatggggtccctggtctccatggtccgcatgctctgtcacctgt
ggaggagggatccatgagaggtctcgtctctgtaacagcccagagccacaatatggagga
aagaaatgtgtgggagatgtcaagcaacatgatatatgcaacaagaatgattgcccaatt
gatgggtgtttgtcaaatccttgctttcctggagcagaatgcaacagttaccctgatgga
tcttggtcatgtggcccatgtccagctgggtaccttggaaatggaacagtgtgtgaggat
cttgatgagtgtatagctgtgccagatgtttgttttaaggtgaatcaggtacatcgctgt
gtgaacgcaaatccagggttccactgcctgccctgcccaccacgctacaaaggaaatcag
ccttttggggtgggcctggaggctgccaagacagaaaagcaagtgtgtgaacctgaaaat
ccatgcctagatatgacacacagctgccacaaatctgcagagtgcatctacctcggccat
ttcagtgaccctatgtacaagtgtgaatgtagaacaggatatgctggtgatggacgcatc
tgtggtgaagattctgacctggatggttggcccaatagcaacctggtctgtgctgccaat
gctacttaccattgcatgaaggataactgcccccatctgcctaattctggacaggaagac
tttgataaggatggcaaaggtgatgcctgtgatgaagatgatgacaatgatggggtagag
gatgacaaagacaattgtcctcttctgttcaacccccgtcagtttgattatgacaaggat
gaagttggtgaccgctgtgataattgcccgtatgtgcacaaccctgctcagattgacacg
gataataatggagagggtgactcatgtgctgtggatattgatggtgatgacatttttaat
gaacgagataactgtccatacgtttacaacactgaccagagagatacagatggggatgga
gtaggcgatcattgtgataactgtccattggtgcacaatcctgatcagactgacatagat
aatgacctggttggtgaccagtgtgacaacaatgaggacatagatgaagatggtcaccag
aacaaccaagataactgcccctacatccccaattctaaccaggctgaccatgataaggat
ggcaaaggggatgcatgtgattccgatgatgacaatgatggtgttcctgatgacagggac
aattgtcggctcatgttcaaccctgaccaaaaggactctgatggtgatggcagaggtgat
atctgcaaagacgattttgacaatgacagtgtcccagatatttatgacgtgtgccccgaa
aatattgacatcagtgaaactgacttcagaaaattccagatggtccccctggatccaaag
ggaacagctcaaattgaccccaactgggttattcgccaccagggtaaagaactggtgcag
actgccaactctgatcctggcatagcagtaggttttgatgagttcacctctgttgacttc
agtggcacattctacgttaacacagaccgtgatgacgattatgccgggtttgtgtttggt
tatcagtccagcagtcgattttatgtcctgatgtggaagcaagtcacacagacctactgg
gaggacaagcccaccagggcttatggttattcaggggtatcactcaaagtagtgaactct
acgactggcactggtgagcacttgagaaatgctctctggcacactggaaacacacctgga
caggtacgtaccttgtggcatgaccccaagaatgttggctggaaagattatactgcctac
aggtggcagttgattcacaggcctaaaacaggattaataaaagttttagtatatgaagga
aaacaggtcatggtagactctggaccaatctatgataagacctatgctggtggacgatta
ggtctttttgtcttctctcaagaaatggtctacttctctgacctcaaatatgaatgcaga
gatttctga
DBGET
integrated database retrieval system