Caretta caretta (Loggerhead turtle): 125634011
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Entry
125634011 CDS
T09292
Symbol
TULP4
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125634011 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
Other domain-containing proteins
Tubby family proteins
125634011 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
SOCS_box
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
125634011
NCBI-ProteinID:
XP_048700081
LinkDB
All DBs
Position
3:complement(88201979..88486750)
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AA seq
1567 aa
AA seq
DB search
MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPAAYPVPVQNTKPLLTVSFTSGDISLMNNYDDLSPTVIRSGLRDVVVQWCTQGDLLA
VAGMEKQSQLADLGSSSILKSALVKFYNVRGEHIYTLETPVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQTIAGSLRDDKDISKLTLPPRLCSYLTTAFTPTIKPPI
PDPNNMRDFVSYPTTGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKADEIYGNSLISTVIDSCNCSDSSDIELSDDWAAKKSPKITRASKSP
KLPRINIDARKSPKLSRAAQEISRSPRLPIRKPSIGSPSLTRREFPLEDITQHNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFNP
NVFSEDEDDLPVTGASGVPENNPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLTNQTTAVGTTEHVGDNAVQYPVSSRYSNPGQVIFGGVEMGRIIQAPPQLSLQPQGA
IQMAIMDHRDGDRDHEHHQKAKTLRPVQQLAEGDAVVFSTAQEIQLNKMNPPPPYPGTIP
AAPTAPPPPPPIPPQPPMDLCLKKGDFSLYPAGHYQTPLGYERITTFDSSGNVEEVCRPR
TRMLNTYTLPGPGSSATLRITATEKKIQQPCSSATLNRLTVPRYSIPTGDPPPYPEIASQ
LSQGRSITQRLDSSIIHATLRRNSREAALKMAQLVDSQRATLQHPPKPKSNVVTAQYQQR
APTALYTCSQCSSNSNTSSSGGGNISHANASNSTSSISSMRPDVTTGSSSQHSSVIAHSV
STSPLASQSSYNLLSPPDNSRDRTDYINSAFTEDEALSQHCPVEKSIRHMPVALTEAAVG
VKRPPPYQWDPMVSEEIWVPQERTAQSSVPNPLKPAPLIGQAQHLDMSRVPFVSPKSPTS
PTATFQMSYGVGVPYPGSYSAPPLQGMQAPCSPKEALAPTQFAQQEPTVVLQPGYPSNLS
YCPLPPMYPGSSTCSSLQLPPIALHPWNSYSACPPVQNSQGTLPPKSLLVVEKPVMSPPP
AELQGHVGTEVMVETADTFQEVLSLTESPIPQRTDKFGKKNRKRLDSRAEEGNVQAITEG
KVKKEARTLTDFNSLISSPRLGREKKKVKSQKDQLKSKKLNKTNEFQDSSESEPELFISG
DELMNQSQGSKKGWKTKRNLRTASELDEFKCRKANEKEDGRLGSQGFVYVMANKQPLWNE
ATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALA
NVTQRLK
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcggtggaacatgggcctgttctttgcagcgattccaacatcctctgcctc
tcctggaaaggtagagttcccaaaagcgagaaggagaaaccagtgtgcaggaggcggtac
tatgaagagggctggctggcaacaggcaatggcagaggagttgtcggagtgactttcacc
tccagtcattgtcggagagaccgaaacacccctcagagaatcaacttcaatctgaggggc
cacaacagcgaggttgtattggtgagatggaatgaaccattccagaaactggcaacctgt
gatgcagatggaggaatttttgtttggattcaatatgaaggcagatggtctgtggagctt
gtgaatgatcgtggggcacaggtgagcgactttacatggagccatgatgggacacaagct
ctcatctcctatagggatggatttgtgctggttggttcagtcagtggacagagacattgg
tcttcagagattaacttggagagtcagatcacctgtggcatatggactcctgatgatcag
caggtactgtttggcactgctgatggtcaagttatcgtcatggactgccatggccgaatg
ctggcacatgttctccttcacgagtcagatggcatcctcagtatgtcttggaactacccc
agcttcctggtggaagacagcagtgaaagtgacacagattctgatgactactccccaccg
caagatggtccagctgcatatccagtcccggtgcagaacaccaaaccactactcactgtc
agcttcacgtcaggagacattagtttaatgaacaactatgatgacttgtctcctactgtc
atccgctcagggttgagagatgtagtggtgcagtggtgtacacagggagacctgctggct
gtagcaggcatggaaaagcaaagtcagctagctgaccttggtagcagttccattctgaaa
agtgcactcgtcaagttctacaatgtccgtggggaacatatctacactctggagactcct
gtgcagcgtcccataatctccatttgctggggccacagggactcacgcctgctcatggct
tccggccctgcactctatgttgtcagagtagagcacagggtctccagcctgcagctcctc
tgccagcagaccatcgctggctctctgcgggatgacaaggatatcagcaaactgacgctg
cctcctcggctctgctcatacctcaccactgcctttacaccaactatcaagcctcctatc
ccagaccccaacaatatgagagattttgtcagctacccaacaactggcaatgaaaggctt
cactgcacgatgaagcggacagaagatgatccagaggttggaggtccatgctacacgctg
tatttggaatacctagggggactggtgcctatcctaaaagggcgccgaatcagcaaactg
cggccagaatttgtcatcatggaccctaaaaccgatggaaaagcagatgaaatctatgga
aacagcttgatttctactgtgattgacagctgcaactgctcagactccagtgatatcgaa
ctgagtgatgactgggctgcaaagaaatctcccaaaatcactcgagctagcaaatcaccc
aaactccccagaattaatatagatgcccgcaaatctccaaagttgtcgcgagctgctcag
gagatatcaagatctccaaggttaccaataaggaaaccttctattggttcaccaagccta
actcgacgagagttcccattggaagatatcactcagcacaactaccttgctcaggtcaca
tctaatatctggggaaccaaatttaaaattgtgggtttggctgctttcctaccaactaac
cttggtgcagtgatttataaaaccagtttgctgcatctccagcccaggcagatgactatt
tatctccctgaagtgcgtaagatttccatggactatattaacctgcctgttttcaacccc
aatgttttcagtgaagatgaagatgatttaccagtaactggagcatctggagtccctgag
aacaaccccccctgcaccgtcaatatccctattgctcctattcacagctcagcgcaagct
atgtcaccgactcagagcataggactagtccagtccttgttggccaatcagaacgtgcag
ttggatgtcttgaccaatcagacgacagctgtggggacgacagagcatgtgggtgataac
gcagtgcagtacccagtctcaagcaggtactccaatccaggacaggtgatttttggagga
gtggaaatggggcgcatcatccaggcaccgcctcagttatccctgcagccgcagggtgca
atacagatggcgataatggatcacagagatggagacagagaccacgaacaccaccaaaag
gcaaaaactttacggccagtgcaacagctggcagaaggggatgctgttgtcttcagcact
gcacaagaaatacaactgaacaaaatgaacccgccccctccttatcctggaaccatacca
gctgctcccactgcaccaccacctcccccgcctatcccgccccagccacctatggatctc
tgtctgaaaaagggagacttttccctttatccagcaggacattatcagacccctcttggc
tatgagcgaataacaacctttgatagcagtgggaatgttgaagaggtgtgccggcctcga
acgaggatgctgaacacttacaccctgccaggtcccggcagctctgccactttaaggatt
acagcaacagagaagaaaatccagcagccctgttccagtgctaccctgaacaggctgacg
gttcctcgttattctataccgactggggatccaccaccttacccagaaattgccagccag
ctgtcacagggccgtagcatcacacagaggctggacagtagtattatccatgctactctg
cggaggaacagcagagaggcagctctgaaaatggctcagttggtcgacagccaaagagcc
actttacaacatccaccaaaacctaagagcaatgttgtgacagcacagtaccagcagagg
gcaccgacagctttatacacctgtagccaatgcagcagtaacagcaacacgagtagcagc
ggtggtgggaacatcagtcatgccaatgctagcaacagcacttccagtattagcagtatg
aggcctgacgtaaccactgggagcagttcccagcacagctctgtcattgctcactcagtc
agtacttcgcccttggcctcccagtcctcatacaatttgctgagcccacctgataactct
cgtgatcggaccgattatatcaattctgccttcacagaggatgaggcactttctcagcac
tgtccagtggagaaatcgataaggcacatgcctgtagccttgacagaggctgccgttggt
gtgaagcggccacccccgtaccaatgggatcctatggtgagtgaggagatatgggttcct
caggaaaggacagctcaaagttcagtgcccaatcctctcaaacctgctcccctaataggg
caagctcagcatcttgatatgtctcgagtgccatttgtttcccccaaatctccaaccagt
cccactgccactttccagatgagttatggggttggagtaccttatccaggaagctacagt
gcccctcctctccagggaatgcaggccccctgctcccccaaagaagctctggccccaaca
cagtttgcacaacaagagccaactgtagtgcttcagccaggttatccatctaacctctcc
tattgccccttgccacccatgtatccaggaagtagcacttgctctagtttacagctgcca
ccaatagccttgcacccatggaattcctacagtgcatgcccacctgtacagaattcccaa
ggcactttgccccccaagtcacttcttgtggtggagaagccagttatgtctccgccgcca
gcagagcttcagggtcatgtgggcacagaagtaatggtggagacagcagacaccttccag
gaggttctctccctcacagaaagtcccattcctcaacggacagataagtttgggaaaaag
aaccggaagcgcctggatagtcgagctgaggaaggaaatgtgcaggctatcacagagggc
aaggtcaaaaaggaggcaaggacactgactgacttcaactccctaatatccagccctagg
ctaggaagggagaagaagaaagtcaagagccagaaggaccagctgaagtcaaagaagctg
aacaagacgaatgagtttcaggacagttcagagagtgagccagagctttttatcagtggg
gatgaactgatgaaccagagccaaggcagcaaaaagggatggaaaaccaaaaggaatttg
aggacagccagtgagctggatgagttcaagtgccggaaggccaatgaaaaggaggatggg
agattgggaagccagggctttgtgtatgtgatggccaacaagcagcctttgtggaacgag
gcgacacaggtgtatcagctggacttcggaggacgggtgacccaggagtctgcaaaaaac
ttccagattgagctggaaggacgacaggtaatgcagttcggaaggattgatggcaatgct
tacattttggactttcaatatccgttttctgcagtgcaggcctttgcagttgctctggct
aacgtgactcaacgcctcaaatga
DBGET
integrated database retrieval system
