Caretta caretta (Loggerhead turtle): 125634254
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Entry
125634254 CDS
T09292
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125634254 (DDX10)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125634254 (DDX10)
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
90S particles
Helicases
125634254 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
125634254
NCBI-ProteinID:
XP_048700692
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All DBs
Position
1:35001709..35378483
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AA seq
862 aa
AA seq
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MGGSGRRAGPDPVRSFERWKKKYTKRKNKLRLQQKQRKRPEWEVEREGIARLEQRYPEIK
PNEIERFSDFPLSKKTLKGLQEAEYRMVTEIQRQTIGLSLQGKDVLGAAKTGSGKTLAFI
IPALERLYRQQWTSMDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSAGLIIGGKDLKQE
ANKIHHINILICTPGRLLQHMDETSYFHASDLQMLILDEADRILDMGFADTMNAIIENLP
KKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCGLQQKINML
YSFLRSHLNKKSIVFYASCKEVQYLFRVFCRLRPGIPIMALHGKQQQMKRMEVYNDFVRK
KSAVLFSTDVAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEE
KGMVHQLSQRKVPVNEIKINPEKLVDVQKKMQAFLAQDQELKERAQRCFVSYLRSVYLMK
NKEVFDVFKLPLAEYAHSLGLAVAPRVRFLQKAQKQLSVNESLEGKSHPKGTGQCEDACS
LVSDEEVEESRTHFKEKISTVQRMKREGKKEPPEEKELPSKVIDKEGDESGELSEKEEVS
SINKVPKAESINFFEDNDDDFRDLDLLTVKRQNVFGLEAKDLAVLNTSNSKLKKATKTKE
AKKILKRKFKVNTKIVFTEDGELVQEWPPAQKSSVDSEEKEDDSGGINLDKAKERLQEED
KFDKEAYRKKIKEKHREKRLREKEARREARRKSEKVEEEAEAFLDYSGSEEEFDPSTLPD
PDKHRGSDQEADLDIEDSNGELEEKNGTRKRGKSSNKAAAEETPLRRKKAKLSDEDSFVP
LDTGLSLAEDEELVLHLLNSQR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgggcggctcggggcgccgcgcgggcccggacccggtgcgcagcttcgagcgctggaag
aagaaatacaccaagcgcaagaacaagctgcggctgcagcagaagcagcggaagcggccg
gagtgggaggtggagcgcgaggggatcgcccggctggagcagcgctacccggagataaaa
cccaatgaaattgaaagattttcagatttcccattgtcaaagaaaacattgaaaggtttg
caagaagcagagtatcgcatggtaactgagatacagaggcagactataggcttgtctttg
caaggtaaagatgtacttggagctgcaaagactggatcaggcaaaaccttggcttttatt
atcccagctttggaaaggttatatcgccaacagtggacatcgatggatggattgggagtt
ctgataatatcgcctacgagggaactggcataccagacctttgaggttctgcgtaaagtg
gggaagaatcatgaattttcagctggccttatcattggtggaaaggatctgaaacaagag
gccaacaaaatccaccatataaatatacttatttgcacgccgggtcggcttctacagcac
atggatgaaacgtcatatttccatgcatctgatctccaaatgttgattcttgatgaagct
gatagaatcttggacatgggcttcgctgatactatgaatgcgattatagaaaatcttcct
aagaaacgccagacattgcttttttcagcgacacaaaccaaatcagtgaaggatcttgca
cgactgagtctaaaagatccggaatatgtttgggttcacgaaaaagcaaaattcagtacc
ccagcaactttggaccagaattatattgtttgtgggctgcagcaaaaaataaacatgttg
tattccttcctgagaagtcacctgaataagaagagcattgtgttttatgcaagttgtaaa
gaggttcagtatttgttcagagtgttctgtaggctccgccctggcatacctataatggct
ctccatggcaaacagcaacagatgaaaagaatggaggtctacaatgactttgttcgcaag
aaatcagcagtgcttttttctacagatgttgcggctcgagggctggatttccctgcggtg
aactgggtcattcagttcgattgtccagaggatgcaaatacatacattcatagagtggga
agaacagccaggtacaaagaaggtggtgaagctttgttagtactgcttccctctgaagaa
aaaggcatggttcaccaactgtcgcagagaaaagtacctgtcaatgaaatcaaaatcaac
cctgaaaagcttgtagatgtccaaaagaagatgcaggcttttttagctcaagatcaagag
ttaaaggagagggctcaaaggtgttttgtatcctacttgcgttcagtctacctaatgaag
aacaaagaagtttttgatgtgtttaagttacctctagcagaatatgcccactcccttggc
cttgcagtggcacctcgggttagatttcttcagaaagcccagaaacaattatctgtgaat
gagtcactggaaggaaaaagccacccaaaagggacagggcagtgtgaagatgcatgctcc
ttagtaagcgatgaagaggtggaggaaagccgaactcattttaaagaaaagatatctact
gttcaaagaatgaaaagagagggaaaaaaagaaccaccagaggaaaaagaactccccagc
aaagtcattgacaaagagggcgatgagtcaggggaattatctgaaaaagaagaagtttct
tcaataaacaaggttccaaaagcagaatccattaatttctttgaggataatgatgacgac
tttagagatcttgatttgctgacagtgaaacggcagaacgtttttggcttggaagctaaa
gatcttgcagtattgaatacctcgaattcaaaattgaagaaagctactaaaaccaaagaa
gccaaaaaaatattgaagaggaaatttaaagtcaacacaaaaattgtctttactgaagat
ggggagttagttcaggagtggccaccagcacaaaaatccagtgtggacagtgaagagaag
gaagatgattctggtggcatcaacctagataaagcaaaggaaagattacaggaagaggac
aaatttgacaaagaagcatacaggaagaaaattaaagaaaaacatagggagaaaaggctg
agagaaaaggaagcaagaagagaagccaggaggaaaagcgagaaggttgaagaggaagct
gaggcctttctggattatagtggaagtgaagaggaatttgacccaagcacccttccagat
cctgataaacacagaggctctgaccaagaggctgatctggatattgaagacagcaatggt
gagcttgaggagaagaacggaacaaggaaaagaggcaagagcagcaataaagcagcagca
gaagaaacgccactgagaaggaaaaaggctaaacttagcgatgaggactcttttgtgcca
ttagatacagggctttctctggcagaggatgaagaactcgtactacatctgctcaacagt
cagagataa
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