KEGG   Caretta caretta (Loggerhead turtle): 125634389
Entry
125634389         CDS       T09292                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03410  Base excision repair
ccay04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125634389 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125634389 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccay03400]
    125634389 (PARP4)
DNA repair and recombination proteins [BR:ccay03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125634389 (PARP4)
SSDB
Motif
Pfam: PARP4_MVP-ID WGR-like_PARP4 VIT PARP VWA_3 VIT_2 VWA VWA_2 BRCT BRCT_2 VWA_CoxE PARP_reg PTCB-BRCT
Other DBs
NCBI-GeneID: 125634389
NCBI-ProteinID: XP_048701005
LinkDB
Position
1
AA seq 1961 aa
MKQGRAGFSFLIPKRCPRIHLHCQYRCLRAFPVRLLLPSWRTCFLFNSVYRLLRSQCCLL
CRLDRPFPLVPLEQENIPPPPVITRSLCHTSLQIPEDPSGRKLAPSKMTVGIFANCVFFL
KMKHLPIQEKNRLRTCIKENGGIIYFVLNHECTHVIVDNVAVLSSYHLKTIEKYRLPIVS
ADFVLKSAEERKLLQIDDYESSKSLEGTSDQKPSCYGEKNRSSSEHDIKEKEDTTEKNEN
CGPDPTPLEVSDCSVGPSMESIRFYTENDQGIPYFPQDFEVAKYDALEKISTEKGKQVVV
IELQCSQESCEFPFRIAAHFSMSDGFKSKKQFIATKTSEEVRKNYEIYVEDLKNQDFLLR
ETFPPGADNLASMKLQEILLEEAINSSTLSQEISAFVELIWAEALGHLDHLLLEPVNNIS
LNDVSKGEGILLQIKNAMNEGTAAMALKAMMMEFYRIIRHKSGIDYNITKKLLSSKQDLC
QLIRDMLNVCETSMSSPNPPSLAKYRALRCKIQAINPKSEEFLNVKQQVLKNNHSDCPVK
VLQIFRVGRISETAEFLSSLGNVQSLFHASSVCNFVGILSRGLLLPKIVVEDHGMERTDV
GNLGSGIYFSDSISTSIKYSLQSEMDGTRLLAVCNVALGTCLDLYKKALSLTNAPSGYDS
VHGVRKTANIYSDFEDDEFVVYKTCQVKMRYIVKFCLPGDQIKQFQPGIVTELAQDLPAT
SHCHLQPEDYALPRVNLLNHVKTGLQDTSGNPVPLEDIHIKGRIIDFIAQIVVFQTYTNQ
NDNSIEAKYVFPLDDTAAVCGFEAFINGKHIVGKVKEKEQAHKEYRDAISRGDGAYLMDQ
DAPDIFTVSVGNLPPKTTVLIKVTYITELSFQNGCITFQMLAAVAPWQQDKALNENTQDT
VKKVCVKQIGPKKGGFCMAMSIEMPHRIERIHSWTHTLKIKKTDCKAVIRTVENSSLDTS
GFALEIWISQVYLPRMWVEKHPNKESEACMLVFQPKFETKFKGIQLSGEIIICLDCSNSM
EGSTLQQAKKIALHVLQMSCFRQRVNVIRFGTNFTEFSSYSKDIKSDLAAVKEFIISATP
TMGNTDLWKTLRYLSLLYPSQRERNILLLSDGHIQNESMTIQIVKENVRHTRLFTCGFGS
TANHHMLRSLSQYGAGAYEYFDPKSKYNWLKKIESQRSRIFSPGCSSVSIKWQQFDANAP
EPLQAPAQIQSLFNNERLLVYGFIPHCTQATLNALINDQELQEMVSTTELQKTTGTLLHK
LTARALIRDYEDGILHENETEHEMKKHTLKVLIINLSMENSIITQFTSFVAVEKRDVNEV
QHAGLPNILELIAEEDVDFLPYMDWEHETSGHGYLSSNRGVGFGRCESIMSTVWPPSDPQ
GEEPLYVPGWVESGRVHPSHWKLRGRTGSTKRGTFSSVGAESGQETGEYRSLLASYSAAE
PSGALTPEETKSMEELLMAMYPRERDNTYRAQVVFPQATTAAFLSGQLVGTGGIPDNAQR
SEGMVLPTAASGRPKRDTAVLALSDWQGAETGIRCLENEQDVNEVQHAGLPNIPMAPEHL
DFLPYKDWEHDTSGYLSSNRGVGFGRSELVPFHAVTSGFSDHFLTGGDKQLKSLQFQSDK
EVPLVEQCILPDSTELSFIKAAKVEYDPGAAGVGLFGSISVPQPKFSLHGQSLLNIRLPK
PPASKPFSFQVSIPPPCPLPCAASCPPRPPPCAPPFPPLCPPEFTQGLCSDLKSSFTPVG
RTLKKANFETQVTPEVLASSARFRLGSPMLQTAPKYGEKLHRELSKDLFLTAMRKKQLGK
TSPQMRIQQSPPSAVTWTQIFKLQNQDGFWNLSPELGVILDLDVDYLTNIFLAKKGIWSL
GPKGREVLQLIATLLVLQFIRYKQQLEGITFKSLMKLDDSPTSSAIHWAFASVKKAVEWV
RRVDRQFPAICHRLELGKDWDSATKKLLGIELISTNFPPSI
NT seq 5886 nt   +upstreamnt  +downstreamnt
atgaaacaggggcgggctggattcagtttcctaatccctaaaagatgccccagaattcac
ttgcattgtcaatatcgctgtctacgtgcatttccggtgcggctcctgctgcccagttgg
agaacctgcttcttgttcaattcggtttatcgtctgcttcgcagtcagtgctgtcttttg
tgccgtttggacaggcctttccctttagtaccattggaacaggagaacattccaccccct
ccagtcattacgcgcagcctctgtcacacatctttgcagataccggaagatccctctggc
aggaagctcgctcccagcaagatgactgtgggaatctttgcaaactgtgtgttctttctt
aaaatgaaacatttacccattcaggagaagaatagactgagaacatgcattaaagaaaat
ggtggaataatttattttgtgctaaatcatgagtgtacacatgtcattgtggataatgtt
gctgtactcagctcttatcatctgaaaactattgagaagtatcgactccccattgtaagt
gctgattttgtattgaaatcagcagaagaaagaaaacttttacagattgatgactatgag
tctagtaaatcattggaaggtacttctgatcaaaagccaagctgttacggtgaaaaaaac
cgctcatcttctgagcatgatattaaggaaaaagaggataccactgagaagaatgaaaac
tgtggccctgatcccactcccttggaagtcagtgattgctctgttgggcccagtatggag
agcatcaggttttatacagaaaatgatcaaggtattccttattttccacaagattttgaa
gttgcaaaatatgatgcccttgaaaaaattagtacagagaaaggcaaacaagttgtagtt
attgaattgcagtgttcccaggaatcatgtgagtttccctttcgaatagctgcacacttc
agcatgtcagatggatttaagagtaaaaaacagttcatagcaactaagacttctgaagaa
gtaagaaaaaattatgagatttatgttgaagatttgaagaaccaggactttctattaaga
gaaacctttccaccaggtgcagacaatttagcctctatgaaattacaagagatacttcta
gaggaagccataaattcaagcactttatcccaagaaattagtgcttttgtggaactgatc
tgggcagaagcacttggtcatttggaccatttactacttgaaccagtaaacaacatcagc
ctaaatgatgtgagcaaaggggaaggtattctacttcaaataaagaatgcaatgaatgag
ggaacagcagcaatggcactgaaagcgatgatgatggagttctatcgaattatacgtcac
aaaagtggaatagactataatattaccaaaaaactgttatctagcaaacaggacctctgt
cagctaatcagagacatgcttaatgtttgtgaaacaagtatgtcaagccctaacccacca
tctcttgctaaataccgggctttaaggtgcaagatacaagctatcaatccaaagagtgaa
gaatttctcaatgttaaacagcaggtgttgaaaaacaatcacagtgactgtccagtgaaa
gttctacaaatattcagagttggcagaataagtgaaacagcagagtttctgagcagtctt
gggaatgttcaatccttattccatgcatcatctgtgtgcaactttgttggaattctctcc
cggggactccttttaccaaagatagtggttgaagaccatggcatggaaagaactgatgtt
gggaacctggggagtggcatttatttcagtgattccatcagtacaagcattaagtattct
ctacaaagtgaaatggacggaactcgattgttggctgtttgtaatgtggcactaggaacc
tgcctggacttgtataaaaaagctttgtcattaactaatgcaccatcaggatatgacagc
gtgcatggagtccgtaaaacagcaaacatctattcagattttgaggatgatgaatttgtt
gtatacaaaacctgtcaggttaaaatgagatacattgttaagttttgtcttcctggagac
caaataaagcagtttcagcctggaattgtgacagaattagcgcaagatctgccagcgacc
tcacattgtcatttacaacccgaagactatgcattaccaagagtaaatcttttaaaccat
gtgaaaactggtcttcaggacacatctggaaacccagtccctcttgaagatattcatatc
aaggggaggataatagacttcatagcacagatagtagtgtttcagacatacaccaatcaa
aatgataattccattgaggcaaaatatgtctttcctttggatgacacagcagctgtatgt
ggatttgaggctttcatcaatgggaaacatattgttggaaaggttaaagaaaaggaacaa
gcacataaggaatatagagacgcaatcagtcgaggtgatggagcttacttgatggaccag
gatgctcctgatatttttactgtaagtgttggaaacttaccacctaaaactacagttctt
atcaaagtcacctacatcactgagcttagttttcagaatggctgtattacttttcaaatg
cttgctgctgtggctccttggcaacaagacaaagccttaaatgaaaacacacaggataca
gtaaagaaggtttgtgttaagcaaataggaccaaaaaagggtggattctgtatggccatg
tctattgaaatgccacaccgtattgaacgcattcatagttggacgcatacacttaaaata
aagaaaacagactgcaaagccgtgatcaggactgtggagaacagttccttggacaccagt
ggctttgctctagaaatctggatttctcaagtgtatctacccagaatgtgggtagagaag
catccaaacaaagagagtgaggcatgcatgcttgtatttcaaccaaagtttgaaacaaag
tttaaaggaatccagctgtctggagaaattattatttgtctagattgctccaattccatg
gagggttcaacactgcaacaagcaaagaagattgctctccatgttctacaaatgtcttgt
tttagacagagagtgaatgttatcagatttggcacgaatttcacagaattttcttcatat
tcaaaggatatcaaaagtgatcttgcagcagtgaaggagtttattatctctgctacacct
acaatgggaaatactgacttatggaaaaccttacgttatttaagtttgttgtatccttct
caaagagagcgtaacattcttcttctatccgatgggcacattcagaatgagagcatgacc
atccaaattgtgaaagagaatgtcagacacaccaggttatttacatgtggttttggttcc
acagcaaatcatcacatgctgagatctttgtctcaatatggcgctggagcatatgaatat
tttgacccaaaatcgaagtataactggctaaaaaagatagaaagccagagatccagaata
ttttctccaggatgcagttctgtctctattaaatggcaacagtttgatgcaaatgcacca
gagccattgcaggctcctgctcaaatacagtctttatttaacaacgaaagacttcttgtc
tatggatttatcccacattgtactcaggccaccttaaatgcactaataaatgaccaagaa
ttgcaagaaatggtatcaaccactgaattacagaagacaacaggaacacttctccacaaa
ctcacagcaagagccctcattagggattatgaagatgggatacttcatgaaaatgaaaca
gaacatgagatgaagaaacatactttgaaagtcctgattattaacctcagcatggagaac
tccatcataacccagtttacaagctttgtggcagtagaaaaaagggatgttaatgaagtt
cagcatgctggtcttccaaacattcttgaacttatagctgaggaagatgtagacttttta
ccctacatggactgggaacatgagacatctggacatggatacctgtcttctaatagagga
gtgggatttggcagatgtgaatcgatcatgtccacggtgtggcctccctccgatccacag
ggggaggaaccactttatgtgcctgggtgggtggagtcaggccgggttcacccttctcac
tggaaattgagaggcaggacgggaagtacaaaaagaggaaccttcagctcagttggagct
gagtcagggcaggagacaggtgaatatcgctcgctgctggcctcttactccgctgctgaa
ccaagcggtgccctgaccccagaggagaccaagtccatggaggagctgctgatggctatg
tacccccgggagagggacaacacctacagagcccaggttgtatttccccaggcaaccact
gctgctttcctgtctggccagttggtggggacagggggtatccctgacaatgcacagaga
tcagaaggcatggtcctaccaacagcagcctctggcaggcccaagagagacactgcagtg
ctggctctgtctgactggcaaggagctgagaccgggatccgctgtttggaaaatgagcag
gatgttaatgaagttcagcatgctggtcttccaaacattccaatggctccagaacattta
gactttttaccctacaaggactgggagcatgatacatctggatacctgtcttctaataga
ggagtgggatttggcagaagtgaattggttccttttcatgcagtaactagtggtttttcg
gaccatttcctaaccggaggagataaacagctgaaaagtctccaatttcaaagtgacaaa
gaagttcccttggttgaacagtgcattttaccagattctactgaattgagttttataaag
gctgctaaagttgaatatgatcctggtgccgctggagttggactatttgggtctatctct
gtgcctcaaccaaaattcagcctgcatggtcaatcacttttaaacatcagactacccaag
cctccagctagtaagcctttttcttttcaagtttctatacctcctccttgccctcttcct
tgtgctgcttcttgccctcctcgccctcctccttgcgctcctcctttccctcctctttgc
cctcctgaattcactcaggggctttgttcagatttaaagagttcatttactcctgtgggc
agaaccctgaagaaggcaaattttgaaacacaagttactcctgaagttcttgcttcatca
gctaggttcagactaggatcaccaatgctacaaactgcaccaaagtatggagaaaaactt
catcgtgagctcagcaaggatcttttcttaacagcaatgaggaaaaaacagcttggtaaa
acatcaccacagatgaggattcaacaaagcccaccaagtgctgtaacctggactcagatt
tttaagctccaaaatcaggatggtttttggaatctcagcccagaacttggggttatcttg
gatcttgatgtggattatttaaccaatattttccttgcaaaaaaaggcatttggtcccta
ggtcctaaaggaagagaagtattgcagttgattgctacacttttggtgctgcagttcata
cggtataaacagcaactggaagggataaccttcaaatctctaatgaaactggatgattcg
cccacttcaagtgctattcactgggcttttgcttcagtaaagaaagcagtggaatgggta
agaagagttgacagacaatttccagccatctgccatcgacttgaacttgggaaggattgg
gactctgccactaagaagttgttgggtatcgagttaatcagcaccaactttcctccaagt
atttaa

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