Caretta caretta (Loggerhead turtle): 125634463
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Entry
125634463 CDS
T09292
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccay03037
]
125634463 (IFT88)
Cilium and associated proteins [BR:
ccay03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
125634463 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_6
TPR_19
TPR_14
TPR_7
TPR_16
ANAPC3
TPR_11
TPR_17
ARM_TT21_4th
TPR_10
TPR_CcmH_CycH
ARM_TT21_5th
TPR_9
TPR_15
TPR-S
HEAT_Nup120
HAT_PRP39_C
DUF6584
ARM_TT21
TPR_21
ARM_TT21_2nd
Consortin_N
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
125634463
NCBI-ProteinID:
XP_048701212
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Position
1:37845356..37942007
Genome browser
AA seq
819 aa
AA seq
DB search
MMQNVHLAPKADEEDLYSGYNDYNPTFDTEDLENDTAFQQAVRTSHGRRPPITAKIPGTS
ASRPLATGFGSKTALSSSMGRPMTGAIQDGVARPLTAVHAAGYTKAALRGSVFDPLGQAR
GPAPPLEMKNEDTPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQIASPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNGGRLKVNMA
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYTDGISSFEHIMS
TSPNLKAGFNLILCYFAIGDREQMKKAFQKLITVPLEIDYDDKYISPNDDPHTNLLIEAI
KNDQLRQMERERKGMAEKYIMTAAKLIAPVIETSFAIGYDWCVEVVKASHYVELANDLEI
NKAITYLRQKDFYQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQATNYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRIDEALD
CFLKLQAILRNSAQVLYQIASLYEIMEDPNQAIEWLMQLISVVPTDSYALSKLGELYDNE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIQPTQVKWQLM
VASCYRRSGNYQKSLDTYKEIHRKFPDNVECLRFLVRLCTDMGLKEVQEYVTKLKRVEKL
KEIREQRVKSGRDGSARSRREGSGSGDSGGSAKGERLSAKLRALPGTNEPYESSGNKEID
ASYVDPLGPQTERPKTAARKRTDEDDFADEELGEDLLPE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtccacctggcacctaaagcagatgaagaggatctttattctggctac
aatgattataaccccacctttgacacagaggatttagaaaatgacacagcttttcagcag
gctgtgagaactagtcatggtagaagacccccaataacagccaaaattccaggcacatca
gcttcacgacctttagctacaggatttgggtcaaagacagcattatcgtcatcaatggga
agaccgatgacaggagctatacaggatggagttgctcgacctctaacagcagttcatgca
gcaggttacactaaagcagctttgagaggttctgtatttgatccccttggtcaagcaaga
ggtcctgctcctcctttagaaatgaaaaatgaagatactccagaagaaaagattagacag
ttagaaaaaaaagtgaatgagttggttgaagaaagctgcattgccaacagctgtggagac
ttaaaattggctctggaaaaggcaaaagatgctggaagaaaggaaagagtgttggtgagg
caacgtgaacaaattgcatctccagaaaacatcaacttagacctcacttactcagttctt
ttcaatttggccagccaatattctgctaatgaaatgtatgctgaagcactaaatacatat
caagtcatagtgaaaaataagatgttcagcaacggaggcagactgaaggtgaatatggca
aacatttatttaaaacaacgaaactattcaaaagctatcaaattctaccgcatggctcta
gatcagattccaagtgtccataaagaaatgaggattaaaataatgcagaacattggagtt
gcatttattaaaactggccagtacactgatggcattagttcctttgaacacataatgagc
acatctccaaacctgaaagcaggcttcaacctgatcctttgttattttgccattggagac
cgtgaacaaatgaaaaaagctttccaaaaactgatcactgtaccattggaaattgattat
gatgacaaatatatttcaccaaatgatgatccacatactaacctattgattgaagccatt
aaaaatgaccaattaaggcaaatggaacgtgaaaggaaaggcatggcagaaaaatatatc
atgacagctgcaaaattgattgcacctgtgattgaaacctcctttgccataggctatgac
tggtgtgttgaagtagtaaaagcttcccactatgtagagttagccaatgacctggaaata
aataaagcaattacatatttgaggcaaaaggacttctatcaggctgtggagactttaaaa
atgtttgaaaaaaaggatagcagagtaaaaagtgcagctgcaacaaacctttcatttctt
tattatttggaaaatgaatttgcacaagcaaccaactatgcagatttagctgtgaattct
gatagatacaacccatcagctctcactaataaaggaaatactgtgtttgcaaatggagac
tatgaaaaagcagcagagttttataaggaagctctaaggaatgattcctcatgcactgaa
gcactttacaatataggtttaacatataaaaagttaaacagaatagatgaggctttggat
tgttttctgaaacttcaggcaatccttcgaaacagtgcccaagttctctaccaaatagca
agcttatatgaaataatggaggatcccaaccaagccatagagtggctcatgcagcttatc
agtgtagttccaactgattcatatgcactgtcgaaactaggggaattgtatgataatgaa
ggtgataaatcccaagcttttcagtattactatgagtcatatcggtatttcccttcgaac
attgaggtcattgagtggcttggagcctattacattgatacccagttttgtgaaaaagcc
attcagtactttgagagagcagcgcttattcaaccaacgcaagtgaaatggcaattgatg
gttgctagttgttatagaagaagtggtaactaccaaaaatctctagatacatataaggaa
atacacagaaaatttccagacaatgttgaatgtctacggttcttagttcgtctctgcaca
gatatgggactgaaagaagttcaagaatacgtgacaaagctcaagagagtggaaaaacta
aaagaaataagggaacagcgtgttaaatctggcagagatggcagtgcgcgtagccgcaga
gaagggagtggtagcggggatagtggcggtagtgctaaaggggaacgactaagtgccaag
ctgagggctctgcctggaacaaatgaaccttatgaaagcagcggtaataaagaaatagat
gcttcctatgtagatccacttggaccacaaacagagagaccaaaaactgcagcaagaaaa
agaacggatgaagatgactttgctgatgaagagttaggagaggatttgcttccagaataa
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