Caretta caretta (Loggerhead turtle): 125634559
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Entry
125634559 CDS
T09292
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125634559 (TAF1B)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125634559 (TAF1B)
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Ortholog
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GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
ATP_bind_3
DUF5816
Motif
Other DBs
NCBI-GeneID:
125634559
NCBI-ProteinID:
XP_048701437
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All DBs
Position
3:169164611..169243608
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AA seq
592 aa
AA seq
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MEEEDTRDYSEPCVQCSVVNWGLTDEGRFYCKSCHNVIERTKEVLTSDVVPNAKIQSISR
GFRKRKKIDKGWEWYVCEGFQYILKKQAEALQTLGVYPQMKDAILCNFWRRYLQKSKQAY
CTTPVSYTSKTLSISDVSTDVDSEPERISIRGLSSFSESDGDLQTESSFGYVSSIGKASA
RETTSVCSGSVDGGSYVLKRKKGNLRMSMPMTLSFCYIALLWLREPVTLSDLLRFVIDGH
IPYLNAFQYFPEEMKLYGVDLKIFHVESWPVYEDVHNKMSELAAFLDLPRFPAITDSCFL
HPNILCIKYLMEANLPDELHNWTCRVVKKINAGETDFLTLDPVNKSARKVKYDVLAAAII
IVVLKLLFLLDDQYEWLLANLAGKRNQKNKEGCLWFDFKKWYKIIKKSVDVEQKKLDEER
ARCLWKCEKPLFYSAKEKSVVLKKRQMVVNLQRQFGALSGSRQVVEKQSPSSFQLNWAEE
NTDGNCFHGHILEGVLQEKGNSLTTMNTKYWLCTVKLCNEKICGQLTHYKESNFPQSYQF
VLNLFSFLLRVPASLIHEEVVGMEMYCPNLLEPSGKSNTQTVKITGKEPRGG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggacacgagagattacagtgaaccttgtgtacagtgttctgttgtaaac
tggggtcttactgatgaaggcagattttattgcaagtcttgccacaacgtcatagagagg
actaaagaggttttaacttctgatgttgttcctaacgcaaagatccagtccatctccaga
ggatttagaaagagaaaaaaaattgataaaggctgggaatggtatgtttgtgaaggtttt
cagtacatactcaagaagcaagctgaagctctgcaaactttaggagtgtatccacagatg
aaggatgcaattctatgcaatttctggagacgttaccttcagaagagcaagcaggcatat
tgcaccacaccagttagttatactagcaaaacattatctatatctgatgtcagtacagat
gtggatagtgaaccagagagaataagtattcgtggcttgtcatctttctctgaaagtgat
ggagatttacaaacagaaagcagctttggatatgtttcttccattggcaaagcctcagca
agagaaaccacatctgtctgctccggatcggtagatggtggctcgtatgtacttaagagg
aaaaaagggaacttgaggatgtctatgccaatgacgctttcattctgctatattgcatta
ctctggctgagagaaccagtgacattatcagatctcttaaggtttgttatagatggtcac
attccttacttgaatgcttttcagtattttccagaggagatgaaattgtatggagttgat
ctcaagatctttcatgtagagtcttggcctgtgtatgaagatgtgcataacaagatgtct
gaacttgcagcgtttttagatttgcctcgttttccagctataactgatagctgctttctt
catccaaacatcttgtgcattaaatatctgatggaagccaacttacctgatgaattgcac
aactggacttgcagagtggtaaaaaagatcaatgctggagaaacagactttctgacactt
gatcctgtgaataaatcagcaaggaaagtaaaatatgatgttcttgctgcagccatcatt
atagtggtgctcaaattactatttttattagatgatcagtatgaatggttacttgcaaac
ttggctggaaaaagaaatcaaaagaacaaagaaggctgcctgtggtttgatttcaaaaag
tggtacaagattataaagaagtctgtggacgtggaacagaagaaattagatgaagaaaga
gcccggtgtctgtggaaatgtgaaaaaccactattctactcagccaaggaaaaatctgtg
gttcttaagaaaagacaaatggtagtgaacttacaaagacagtttggcgcactgtctggt
tcaaggcaagttgttgaaaagcaaagcccttcaagtttccagttaaattgggctgaagaa
aacacagatgggaattgctttcatgggcatatcctagagggagttttacaagaaaaaggc
aattcacttacaaccatgaacaccaagtattggttgtgtacagttaaactatgtaatgag
aagatatgtgggcaactgacacactataaagaatcaaactttccacagagctaccagttt
gtgttaaacctgttctccttcctcctaagggtaccagcctctctcatccatgaagaggtt
gtaggaatggagatgtactgccctaaccttctggaaccaagtggaaaaagcaacactcaa
actgtgaagatcaccgggaaggagcccagaggtggttaa
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