Caretta caretta (Loggerhead turtle): 125634702
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Entry
125634702 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00100
Steroid biosynthesis
ccay01100
Metabolic pathways
Module
ccay_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125634702
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccay01006
]
125634702
Enzymes [BR:
ccay01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125634702
Prenyltransferases [BR:
ccay01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125634702
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
CNV-Replicase_N
Motif
Other DBs
NCBI-GeneID:
125634702
NCBI-ProteinID:
XP_048701732
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All DBs
Position
3:complement(189955796..189972642)
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AA seq
418 aa
AA seq
DB search
MERVGKWLGRPRELYNLLWFKMGGGTAVMPPLDQDALSDRLKICYRYLNQTSRSFAAVIQ
ALDGELRHAVCILYLVLRALDTVEDDMTISLETKVPMLHDFHSYLYQPDWRYMESKEKYK
QVLEDFPTISLEFRNLAKVYRDMIADICHKMGAGMAEFLQKKVDSLQEWDKYCHYVVGLV
GIGLSRLFSVLELEDPIIGQDTELANSMGVFIEKTIIIRDYLEDQLAGREFWPREVWSRY
AKKLSDLAKPENIDVAVQCMNELITNALHHIPHVLTYLSRLKTQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNIQAVKSIMYQYVEEIYRKIPSADPSSNKT
QRIIVSIQTLCLPSGTVVSHNHYSPIYLSCTVLLAALSWQYLSAMSEALEEDVQANEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtggggaagtggctgggccgcccccgggagctctacaacctcctgtggttt
aagatgggcggcggcacggcggtgatgcccccgctggaccaggatgcgctcagcgacaga
ctcaagatctgctaccggtacctgaaccagaccagccggagcttcgctgctgtcatccag
gccctggatggggagctgcgtcatgctgtgtgcatattgtacctggttctccgagctctg
gacactgtagaagatgatatgaccatcagtttagaaaccaaggtcccaatgttgcatgat
ttccactcctatctgtatcagccggactggagatacatggagagcaaggagaagtataag
caagtgcttgaggactttccaacgatctccttggagttcaggaacctggcaaaggtgtat
cgagatatgattgcagatatttgtcacaagatgggagctggtatggcagagttcttgcaa
aagaaggttgattccctgcaagagtgggataagtattgtcactacgttgttgggttggtg
ggcattggcctttctcgtctgttctctgtgctggagctagaagaccctatcataggacag
gacacagagcttgcaaattccatgggcgtcttcattgagaaaaccatcatcatccgtgat
tatctggaggaccagttggcaggaagagaattctggcccagagaggtttggagcaggtat
gccaagaagctgtcggatctcgccaagccagagaacattgatgtggctgtccagtgtatg
aatgaactgatcacaaatgctttacaccatatccctcatgtcctcacctacttatctaga
ctgaaaacccaaagtgtcttcaacttctgtgctattccgcaggtgatggccatcgccact
ctggcggcctgttacaataacaaacaggtgtttaggggggtggtgaagattcggaaagga
caagctgtcactttaatgatggatgccacgaacatacaggctgtcaagtctataatgtac
cagtatgtggaagagatctatcggaagatcccaagtgctgacccatcttctaacaagacc
cagcggatcatcgtctctatacagacactgtgtttgcccagtggcacggtggtatcccat
aaccattactcccccatctacctctcgtgcactgtgcttctggcagcgctgagttggcag
tatctgagtgcgatgtcagaggcgttggaggaggatgtacaggccaatgagaactga
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