Caretta caretta (Loggerhead turtle): 125634832
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Entry
125634832 CDS
T09292
Symbol
RNF6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125634832 (RNF6)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125634832 (RNF6)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125634832 (RNF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING_16
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125634832
NCBI-ProteinID:
XP_048702088
LinkDB
All DBs
Position
1:complement(41667899..41681193)
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AA seq
688 aa
AA seq
DB search
MDRSRSRLRGGDEQASPLEHSHGEEERQWQQERLSREEAYYQFINELSDEDYRLMRDHNL
FGTPGEITAEELQQRLEGAKEHLASQTDVENREGEGETAGDSEVLGENSNGDSLLEWLNT
FRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEHNSFEASSDEYMDISHLD
TSTMHMDNRHQRAVSPIATRTRSRTSRDSHGETSNTARTRTVRNSVVQSAEETSSPVLGR
LRRRTRESTGLYRTRSTAHNISSDTGEHSVVRRREIQETVTSTDLQRGRARANVQMSTRQ
RLGILRLRSTLSSRSRSPLQRQDGSTNSEEQSLRQSRNLQQISRRSTRRYTAQPPSEPDE
QTVGSTQTPQFFSSAPTLGITLEEDESSRSTAAVRRHPTITLDLQVRRIRPGENRDRESI
ASRTRSRVGIAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGVGEPSS
VALRSILRQIMTGFGELSSLMETESNSEIQRGSQHLLDIQSELNNSHTVNDDSELSETSV
RHRYVEEGSSETNGENDGTQHYSLNNENRESRQSQEANNLVENGTLPILRLAHFFLLNED
DDDEHLRGLTKEQIDNLSTRNYGDSHTESEISKTCSVCINEYVTGNKLRQLPCMHEFHVH
CIDRWLSENSTCPICRQPVLGTNTADNG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatctaggtctcgtttgcggggaggtgatgaacaagcctctcccctagaacac
agtcatggtgaagaggagagacagtggcagcaggagcgccttagcagagaagaggcctat
taccaattcattaatgaactcagtgatgaagactacaggttaatgagagaccacaatctt
tttggcactcctggagaaataacagcagaagagctacagcaacgtctagagggggcaaag
gagcatctagcatcccaaactgatgtagaaaatagggaaggtgaaggagaaactgctgga
gattcagaggttcttggggaaaattcaaatggtgactctctgctagagtggctgaacaca
tttcgtcgcacaggaaatgctacccgcagtggacagagtgggaaccaaacttggagagct
gtgagtcggacaaatccaaatagcggggaattccggtttagtcttgaaatcaacataaat
catgaacataatagttttgaagcttctagtgatgaatatatggacatttcacacttggat
actagcacaatgcatatggacaatcgacatcaaagagcagtcagtcctatagctacacga
actaggagcaggacatcaagagattctcatggtgaaacttctaacactgcaagaaccaga
actgtgagaaattctgtggtacaaagtgctgaagaaacctcttctcctgtcttgggaagg
ctcagaagaagaactagggagtcaacaggcctttacagaacaagaagcacagcacataat
atttcttcagatactggtgaacacagtgttgttaggcgaagagaaatacaagaaacagtc
acatccactgatctccagagaggtagagctagagctaatgttcagatgagtacaagacaa
agactaggaattctaaggttaagatctaccttgagtagtcgaagccgttctccattgcaa
agacaagatggctctactaattctgaggagcaaagtctgaggcaaagtaggaatttacag
caaatctctagaaggtctactaggagatatacagctcagcctccctctgagccagatgaa
caaacagtaggtagcacacagacgccacaattttttagttcagccccaacattaggaata
acattggaagaggatgaatctagtagatcaacagctgcagttagaagacatccaactatt
acactagatcttcaggtaagaagaattcgtcctggggaaaatagagatagggagagtatt
gctagtagaacacgctctagagtgggaatagcagaaaacacagttactttcgaaagtgat
agtggtggatttcgccgtacaatttcccgatcagaacgtgcaggtatacgaacctacgtt
agcactatacggatccctcttcgtagaatttcagaaactggtgttggtgaaccttcatca
gtggctcttcgatcaattctaaggcaaattatgactggttttggagaactaagctcctta
atggagactgaatcaaattcagaaattcagaggggcagtcagcacttattagatatacaa
tcagagttgaataactctcacacagtaaatgatgatagtgaattaagtgagacttcagtt
aggcatagatatgttgaagaaggtagtagtgaaacaaatggagagaatgatgggactcaa
cattatagtctcaataatgaaaatcgggaaagcagacagtctcaagaggcaaacaacttg
gttgaaaatggaacactgcccattcttcgtcttgcacatttcttcttgctaaatgaagat
gatgacgacgagcacttgagaggtttaaccaaagagcagattgacaatctgtctacccgg
aactatggggacagccacacagagagtgaaataagtaaaacatgtagtgtttgtatcaac
gaatatgtaaccgggaacaagctaaggcagttaccatgcatgcatgagtttcatgttcat
tgtattgatcgctggctttctgaaaattctacttgcccaatttgtcggcagcctgtatta
gggactaacacagcagacaatggataa
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