Caretta caretta (Loggerhead turtle): 125634844
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Entry
125634844 CDS
T09292
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125634844 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125634844 (TRIM54)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125634844 (TRIM54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
DUF8512
CoiA_N
TRIM_CC
CRLF3_N
Sina_RING
ZorA-like_t1
CagA
DUF1664
Spectrin
Zn_ribbon_FGT1_2
MRP-S23
FlgN
PAH_ZNF598
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125634844
NCBI-ProteinID:
XP_048702105
LinkDB
All DBs
Position
3
Genome browser
AA seq
394 aa
AA seq
DB search
MNFAVGFKPMLGDSHSTDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSSSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPLHAKA
EQQLMCDEHEDEKINIYCLTCEVPTCSLCKVFGAHKDCEVAPLPSVYKRQKSELSDGVAM
LVAGNDRIQAIVTQMEEICKAIEENSRRQKQHLCQRFDSLCSSLEERKKELVQRISREQE
ERVSHVRSLIRQYGEHLEIASKLVESAIQAMEEPQMAAYLQQSKELLKKITDMSKVSMSS
RPEPGYEKMDHFFVNVDYLAEMLRTIEFQTDSLGEDDSDGFAGGDGGDAGADEDRPEGPE
ALEEAEDPPNQSLQSGPGSVGPRQKPSSSPHGQH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcggtgggcttcaagcccatgctgggggactcgcacagcacggacagcctg
gagaaacagctgatctgccccatctgcctggagatgttcagcaagcctgtggtcatcctg
ccctgccagcacaacctctgccgtaagtgtgccaacgacatcttccaggcgtccaacccg
ctgtggcagtcgcggggctcgagctcggtgtcgtcgggggggcgattccggtgcccctcc
tgccgccacgaggtcgtcctggaccggcacggcgtctacgggctgcagcgtaacctgctc
gtggagaacatcatcgacatctacaagcaggagtccaccaggcccctgcacgccaaggca
gagcagcagctgatgtgtgatgagcacgaggacgagaagatcaacatctactgcctgacc
tgcgaggtgcccacctgctccctgtgcaaggtgttcggggcccacaaggactgcgaggtg
gccccactgcccagcgtctacaagcgccagaagagcgagctgagcgacggggtcgccatg
ctagtggctgggaacgaccgcatccaggccatcgtgacccagatggaggagatctgcaag
gccatcgaggagaacagtcggcggcagaagcagcatctctgccagcgcttcgactccctg
tgcagctccctggaggagcgtaagaaggagctggtgcaacgcatcagccgggagcaggag
gagcgggtgagccacgtgcgctccctcatccgccagtacggggagcacctggagatcgcc
tccaagctggtggagtcggccatccaggccatggaggagccccagatggccgcgtacctg
cagcaatccaaggagctgcttaaaaagatcacagacatgtcgaaggtgtcgatgagcagc
cgcccggagcctggctacgagaagatggaccacttctttgtcaatgtggactacctggcc
gagatgctgagaaccatcgaatttcagacagactcgctgggtgaggacgactcggacggg
tttgcaggcggggatggaggagatgctggagccgacgaggacaggccagaggggccagag
gcgctagaggaggccgaagatcctcctaaccagtctttacagtccggccctgggtcagtg
gggcccaggcagaagccatcgagctccccgcatggtcagcactga
DBGET
integrated database retrieval system
