Caretta caretta (Loggerhead turtle): 125635384
Help
Entry
125635384 CDS
T09292
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II
KO
K06558
macrophage scavenger receptor 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125635384 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125635384 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccay04090
]
125635384 (MSR1)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Phagocytosis
Scavenger receptors
125635384 (MSR1)
CD molecules [BR:
ccay04090
]
Proteins
125635384 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
SRCR_2
VPS51_Exo84_N
DUF1317
DUF6377
Intu_longin_1
Motif
Other DBs
NCBI-GeneID:
125635384
NCBI-ProteinID:
XP_048702980
LinkDB
All DBs
Position
4:77882871..77917544
Genome browser
AA seq
371 aa
AA seq
DB search
MASCEEDHSDGIFCTDQHSDCVKFDTLSEKALFSLCTKKVTDHQRKKQKCFMLTLSVLYL
LVFSIVVVIIRLAVHVSEMEKNLKNDTNLVSENNIQRCFSGDCPGKARKGKEEQRELIIA
HTEALHQIAKEISELKTNLHQKSEHFQNLSTATEQKLWEVGLQINTSTLAMQVLRKLIED
IQTSFRFLNLTLAEVQSAAEDRNNKYTGVFLKQLEDITNLWDNWYNTSATIVTIKQEQSN
LEQEIKGPKGEKGDKSGSSSTIAISPASSIQLVGGHVPNEGRVEIFHAGEWGTICDDHWD
IRDGAVVCKSLGYSTASRIHSGAYFGQGTGQIWMDEVLCFGYETSVENCIFKGWGVTDCK
HDEDAGVTCKV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttgtgaggaagatcattcagatggaattttctgcacagaccagcattctgat
tgcgtcaagtttgataccctgtctgagaaagcactgttttcactatgtacaaaaaaggtc
acggatcatcaaagaaaaaaacagaaatgttttatgcttaccctcagtgttctctatctg
cttgtattttccattgtcgttgtaatcatcagactagcagttcacgtatccgagatggaa
aagaacctgaagaatgacactaatctagttagtgagaataacatacaacggtgcttcagt
ggagattgtcctggcaaagcaagaaaaggaaaagaggagcagagagaactcatcatagct
catactgaagctttacatcaaattgccaaagagatttcagagctgaaaactaaccttcac
caaaagtcagagcatttccaaaatctaagcacagcaactgaacaaaagctctgggaggtt
ggccttcagattaacacctcaaccttagcaatgcaagtccttcggaagttgatagaagat
attcagacctcatttaggtttctgaatttgacattagctgaagttcagtctgctgcagaa
gacaggaacaataaatacacaggagtgttccttaaacagctagaggatatcacaaacctg
tgggataattggtacaacacatcagcaaccattgttaccataaaacaagaacaaagcaat
ctggagcaagaaattaaagggccaaaaggggagaaaggagacaaaagcggaagtagcagc
accattgcaatatctccagcttccagtattcaacttgtaggaggacatgttcctaatgaa
ggtagagtggagatttttcatgctggagaatggggtactatctgtgatgaccactgggat
attcgtgatggagcagtggtctgtaagagtctggggtattcaacagcatctagaattcac
agtggtgcctattttggacaaggtactggtcagatatggatggatgaagttctttgtttt
ggctatgaaacctctgttgaaaattgtatatttaaaggctggggtgtgacagattgcaaa
catgatgaagatgctggtgtcacttgtaaagtttaa
DBGET
integrated database retrieval system
