Caretta caretta (Loggerhead turtle): 125635433
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Entry
125635433 CDS
T09292
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125635433 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125635433 (SEC24D)
Membrane trafficking [BR:
ccay04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125635433 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
125635433
NCBI-ProteinID:
XP_048703087
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All DBs
Position
4:complement(42448251..42538218)
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AA seq
1040 aa
AA seq
DB search
MSQQGYVATPPYSQSQPGIGGFSTGFGPPTSSPLYGHYGNPNPSYSASQSGMLKSTVPFG
SSAPVGSPPPGTHQYSQTNLQNGPHSTGHQPHRFQGPSPRNNAAPSYPPYCPQSQPSYPN
TASSSSTTQLANQLSTLQINNYGPGASQSSLMPSGIPTSFQGPCPPPPPTQQQMALPPGS
QIPPAPANNLNGVCTPPSLPPVAMQDGIPGSVPPNANLQQLPGQPPVPGYHPQHANYGPQ
MAGSQLSYPGAFPGGPGQLAGPQQRKLDPDSIPSPIQVIENDKASRGGQIYATNIRGQVP
PLVTTDCVIQDQGNASPRYIRCTAYCFPSSSDMAKQAQIPLAAIIKPFAAVPPNETPLYV
VNHGETGPIRCNRCKAYMCPFMQFIEGGRKYQCGFCNCINDVPPFFFQHLDHIGRRTDHY
ERPELSLGSYEYVATLDYCRNNKPPNSPAYIFMIDVSYSNIKSGLVKLICNELKTVLDKL
PREEQEETSAIRVGFVTYNKVLHFFNVKSNLAQPQMMVVSDVGEVFVPLLDGFLVNFQES
RSVVNNLLDQIPEMFADTNESETVFAPVIQAGMEALKAAECAGKLFIFHSSLPTAEAPGK
LKNRDDKKLINTDKEKILFQPQVNFYESLARDCVANGCCVNLFLFPNQYVDVASMGLVTM
YTGGTLYKYNNFQVHSDGPQFLSDLRKDIEKRTGFDAIMRVRTSTGFRATDFFGAIYMNN
TTDVEMATVDCDKAITVEFKHDDKLNEDSGALIQCAVLYTSISGQRRLRVHNIGLNCSSQ
LTDLYKSCETDALINFFAKSAFKAILSQPLKTIREILVSQTARMLACYRKNCASPSAVSQ
LILPDAMKVLPVYINCLLKSCVLVGRPEIPTDERAYHRQLVMSMDVADTQLFFYPQLLPI
HTIDIKSDAFPTAVRCSEERLSEGGVFFLANGLNMFLWLGVSAPPELIQGIFNVPSFAHI
GTEATLLPEVDNLYSKKLRSIMDYIQSNRPYSMKLLIVKQREQAEMLFRQYLVEDKSLYG
GASYVDFLCCVHKEICQLLN
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaggttatgttgcaacacctccatattcccaatcccaaccgggtattgga
ggtttttctacaggctttggaccacctacatcttcacctctttatgggcattatggcaac
ccaaacccatcatactcggcatctcagtcaggtatgttgaaatctactgtgccttttggg
tcctctgctcctgttggatctccacctcctggcacccatcagtatagccagaccaacctc
cagaatggcccccattcaactggacatcagccacacaggtttcaaggcccttcacctcgc
aacaatgcagcaccttcctatcccccatactgccctcaatcacagccatcctatccaaat
actgcatcctcttcatccacaacacaactggctaatcagctcagcaccctgcaaataaat
aactatggtcctggtgcttctcagagttctctcatgccttctgggattccaacatctttt
caaggtccatgtccaccaccaccaccaacacagcagcaaatggccttgccacctggatct
cagattcctccggcaccagcaaataacctgaatggcgtttgtactccaccctcactgcct
ccagtggccatgcaggatgggatcccaggatctgtacccccaaatgccaacttgcagcaa
cttccaggacaacctccagtgcctgggtatcatccacagcatgccaactatggccctcag
atggcaggctctcagctctcttatcctggtgcctttcctgggggtccaggacagcttgct
ggtccacagcagaggaagcttgatcctgactccatccccagccccattcaagtaattgaa
aatgataaggcttccagaggaggtcaaatctatgctacaaacatcagaggccaagttcct
cctcttgtcaccacagattgtgtaatccaagatcaaggcaatgccagccctcgttatatt
cgatgtactgcctactgcttcccatcctcttcagatatggccaaacaagctcagattcca
ctggctgctatcatcaagccttttgctgctgttccaccaaacgagacacctctttatgtt
gttaaccatggggagactgggccaattcgatgcaacagatgcaaagcctatatgtgtccc
ttcatgcagttcattgaagggggaagaaagtatcaatgtggattttgcaactgcataaat
gacgtccctccattcttctttcaacatctggatcacattggcagaagaacagaccactat
gagaggccagagttatctctaggatcatatgaatatgttgctacattggattattgcaga
aacaacaagcctccaaactcaccagcctatatcttcatgatcgacgtgtcctatagtaac
attaagagtggccttgttaaactcatatgtaatgagctgaagactgtgctggataaactt
ccaagagaagagcaagaagagacctcagctattcgagttggctttgtcacctataacaaa
gttctccatttctttaacgtaaagagcaacctagctcagcctcagatgatggtagtatcg
gatgttggagaagtctttgttcctttgctggatggtttccttgtcaactttcaggaatca
cgatctgttgtgaacaacttgttggaccagattccagagatgtttgcagacactaatgag
agtgagactgtctttgctcctgttatccaggctggcatggaagcactaaaggcagcagaa
tgcgctggaaagttgtttatcttccattcttcattgccgactgctgaagcaccagggaag
ctaaaaaacagagatgacaaaaaactgatcaatacggataaagagaagatacttttccag
ccacaggtgaatttttatgagtccctggccagagattgtgtggctaatggctgctgtgtg
aatctgttcctcttcccaaaccagtatgtggatgtagcctccatgggtcttgtcacaatg
tacactggaggaactctttacaaatacaacaattttcaggtacattctgatggtccccaa
ttcctgagtgacctcaggaaggacatagaaaaaagaacaggatttgatgcaatcatgagg
gttcgcacaagtacaggtttcagggccactgacttctttggtgccatttacatgaacaac
accacagatgtagagatggcaacagtagactgcgacaaagcgataacagtggagttcaag
catgatgacaaactgaatgaagacagtggagccttaattcagtgtgctgtactttacact
tcgataagtgggcaaagacgactccgcgtacacaatattggcttaaattgtagttcccag
ttaacagatctctacaagagttgtgaaactgatgcacttataaacttctttgctaaatca
gctttcaaagccattctaagccagcccttgaagacaatcagagagatcctggtgagtcag
actgctcgtatgttggcatgttacagaaagaattgtgccagcccatctgcagtaagccag
cttatccttcctgatgcgatgaaggtgctaccggtttatattaattgtttattaaaaagt
tgtgtgctagttggcagaccggaaattccaaccgatgaaagagcttatcataggcagttg
gtcatgtctatggatgttgctgacacccagttgtttttctatccacagcttctgccaatt
cacactatagatataaagagtgatgctttccccactgctgtccgttgctcagaggaacgt
ctgtctgaaggaggggtattcttcttggcaaatgggctaaatatgttcttgtggctggga
gtcagcgccccaccagagcttattcaagggatctttaatgtgccctcctttgcacatatc
ggcacagaggctacactactccctgaagtggacaacctctattctaagaagctcagatca
ataatggattacatccagagcaacagaccttactccatgaagctgctaatagtaaagcaa
cgggaacaagcagaaatgcttttccgacaatacctggtggaagataaaagtctttacgga
ggagcttcttatgtcgatttcctatgctgtgtccataaagagatctgtcagttgctcaac
taa
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