Caretta caretta (Loggerhead turtle): 125635554
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Entry
125635554 CDS
T09292
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125635554 (LRBA)
Membrane trafficking [BR:
ccay04131
]
Endosome - Lysosome transport
Others
Others
125635554 (LRBA)
Endosome - Golgi transport
125635554 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125635554 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
125635554
NCBI-ProteinID:
XP_048703307
LinkDB
All DBs
Position
4:complement(49466205..50024735)
Genome browser
AA seq
2879 aa
AA seq
DB search
MASEDKQVLQPTGDGGGGGGGGKGGGSAEVGSTLQPLNPGVPIRGIRMKFAVLTGLVEVG
EVSNRDIVETVFNLLVGGHFDLEMNFIIQEGESIICMVDLLDKCDITCQAEVWSMFTAIL
KKSIRNLQVCTEVGLVEQVLQRIDKTDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQG
EKGKWPPHAGKLLSVLKHMPHKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLR
MDPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQK
WYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFC
GQMTAVYLFSDALNAAQIFAIYQLGLGYKGTFKFKTESDLFLAEHHKLLLYDGKLSSAIA
FTYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFP
LFAQLDHRQYSLDQVDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVMGHTLEKSSKV
HVTRVVLELCLAFAKYLSNLHNGIPLLKQLCDHILLNPAIWIHTPAKVQLILYTYLSTEF
IGTVNIYNAVRRVGTVLLVMHSLKYYYWAVNPQDRSGITPKGVDGPRPNQKEILSLRAFL
LMFIKQLVMKDYGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQR
NGLRVVYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLHTGL
ITMTTYNVLFEILIEQICTLVIHKQHPDPDSTVKIQNPQVLKVIATLLRNSPQCSETLEV
RRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSEEQKITEMVYAIFRILL
YHAVKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYRDYQRKGDEGSGTVPSTPVRII
SGVSREAEIARRQQLVEVKEAAASAYVGADTVEHSAQKNETKASSECELQSHSPSNEGKK
SEGENGQRSPDLKRAPCLEFPPQTEAVKPGDSEITSGIAEATADSLSKAKELVEETAATD
GASLTVQTVLEGETPESPEMLEEFTPEVEDDDFVDLKEESNLPLPSEELVLKPSEENSSP
ENESQITVAMNEETVEKEPETIPLESKSAEILNKTREELASLSETVTSEVQEETSQLNSE
VNEKLEELKPDGSETKAIGGDANTHTSEASVTSEKKIAKLDVSSVASDTQRLELKPNTSL
EATQPLRPLPEISRQEDSSGQDLATASDGQRRDSRSTMFRIPEFKWSQMHQRLLTDLLFS
IETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSA
THELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIESEKNMSSGGILRQCLR
LVCAVAVRNCLECQQHAQMKPIGETVRSQKTMQSLIGTGKSAAKSPVDIVTGGISPIRDL
DRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNEWRQPHR
SQSFKGTENGSSEAISTDVENPSATTGASTPVSTEDSESSAPVRRRDSGIGEESTSGQAN
NSDAVAEAGPQSASSGPDAISEVLCTLSLEVNKSQENRSEAGNELTEKTASSVPSSKNVN
VKDILRSLVSTPADGATVDPTLLPPTFLGTLGDTAAEQHVQFRSFDRSVVVAPKKSTISP
STATMSVPTNAVSVVSSLDSAQAPDLTGEYPGCGSSNSKLPPVPTVSSVPEDSASNMSIT
ERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLL
CSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEF
ESLCAQYSADKREDEKMCDHLIRAAKFRDHVTASQLIQKIINILTDKHGAWGNSASRHPS
LFVDARMGHSIPAAVTRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAVEHAPD
EDVLLKGKQSIKSQVLGNQNSESEILLEGDDDTLSSIEEKDLENLIGPVSLCTPAQLVAP
SIVVKGTLSITSSELCFEVDEEDPSFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQ
NTALEIFMANRVAVMFNFPDPATVKKVVNCLPRVGIGTSFGLPQTRRISLASPRQIFKAS
NMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDL
SKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFALTWLLRIEPFTTFFLHVQ
GGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNLNNYNLGVMDDGTVVS
DVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTY
EGAVNLSSITDPVLREAVEAQIRSFGQTPTQLLIEPHPPRSSAMQVYLLLQSPLMFTDQA
QQDVIMVLKFPSNSPVTHVAANTQSGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQP
YQLPVEIDPLIASNTSMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYS
TDTGKLIQVVFGHWDVVTCLARSESYIGGNCYVLSGSRDATLLLWYWNGKTNSIGDNSSG
DFATPRAILTGHDYEIVCATVCAELGLVISGAKEGPCLIHSMNGDLLRTLEGPENCLRPK
LIQASREGHCIIYYENGLFCVFSVNGKLQATMETDDKIRAIQLSRDGQYLLTGGDNGVII
VWQVCDLKQLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8640 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaaacaggttcttcagccaacaggtgatggaggaggaggaggagga
ggagggaaaggaggaggttctgctgaagtggggagtacgctgcagcccttgaacccagga
gtccctatccgaggcatcaggatgaaatttgcagtgctgacgggactggttgaagttggc
gaagtatccaacagggacattgtagaaactgtatttaacttgcttgtagggggccatttt
gatctggaaatgaactttattatccaagaaggagagagtattatctgcatggtagacttg
ttggataaatgtgacatcacttgccaggctgaggtgtggagcatgtttacagcaatcctg
aagaagagtatacggaatctacaagtctgcacagaagtagggcttgttgaacaagtgcta
cagagaattgataaaactgacaatatgattgcagatctcttagttgatatgttgggagtg
ctggctagctataatttgacggtccgggagctaaaattgttcttcagcaaactccaagga
gaaaaaggaaaatggccaccacatgctggaaaattattgtctgtattaaaacacatgcct
cataaatatggtcctgatgccttcttcaactttccaggaaaaagtgctgcagctattgcc
ttacctcctatagccaagtggccctaccagaatggatttacttttcacacttggttaaga
atggatcctgtaaataatatcaatgtggataaggataagccttacttatattgttttcga
acaaacaaaggacttggttattctgctcactttgttggaggctgtttgattgtgacatca
ataaagtcaaaaggaaaaggattccagcactgtgtgaaatttgatttcaagccacagaag
tggtatatggttactatagtgcatatctataaccgctggaagaacagtgaacttcggtgc
tatgtgaatggggaactcgcatcatatggagagataacgtggtttgtcaataccagtgat
acgtttgataaatgtttcctgggttcttcagaaacagcagatgctaatcgagtgttttgt
gggcagatgacagctgtttaccttttcagtgacgctctcaatgctgctcagatttttgcc
atttatcagcttggcctgggatacaagggaacgtttaaattcaagacagaaagtgatctc
ttccttgctgagcatcacaaactgttactgtatgacggcaaattgtccagtgctattgct
ttcacatacaatccaagggctactgatgcacagctttgtctagaatcatcccccaaggat
aacccttctatctttgttcattcaccacatgctctcatgcttcaggatgtgaaagcagtc
ctaacacattctatccaaagtgctatgcattcaattggaggagtgcaggtacttttccct
ctgtttgcacagttagaccataggcaatattcattggaccaagttgacacaactgtttgt
tctactttgctggctttcatcatggagttgctgaagaactccattgctatgcaagagcag
atgctttcctgtaagggcttccttgtgatgggacatactcttgaaaagtcttccaaagtc
catgttaccagagttgtgctagaactatgtcttgcctttgctaaatatctgagtaatttg
cacaatgggattccgttgcttaaacagctgtgtgatcacattctccttaaccctgcaata
tggattcatacaccagcgaaggttcagttgattctgtacacttacctgtctactgagttc
attggcactgttaacatatacaatgcagttcggcgagttgggacagttcttctggtaatg
cattccttaaaatattactactgggccgtgaaccctcaagatcgcagtggtattactcca
aaaggtgtagatggaccacgccctaatcagaaggagattttatctctgcgagcattctta
ctgatgttcattaaacagctagtgatgaaggattatggagtgaaagaagatgaactgcag
gctatcctcaattatctgctcacaattcatgaggatgacaatctaatggatgtcttgcag
ttgcttgttgctctgatgtcagagcatccaagttctatgattcctgcttttgatcagagg
aatggattacgggttgtctacaaacttctagcatcaaaaagtgaagggatcagggtacaa
gctctaaaagtgatgggctacttcttaaaacatctagcacctaagagaaaagctgaagtc
atgcttggacatggattattctctttgctggctgaaaggctgatgcttcatacaggctta
atcaccatgaccacgtacaatgtcctgttcgagattcttattgaacaaatttgcactcta
gtaatacataaacagcatcctgacccagattcaacagtgaagatacaaaatcctcaggta
ttgaaagtaatcgcgactctactacgtaactctccccagtgctcagaaactctggaggtt
cgtcgagcttttctctcagacatgattaaactgtttaataacagcagagaaaataggagg
agcttgttgcagtgctcagtgtggcaggagtggatgctttctctttgctatttcaacccc
aagaactctgaagagcagaagataactgaaatggtgtatgccatttttagaatcttgctt
tatcatgcagtgaaatatgagtggggtggctggcgagtttgggtggatacactgtcaatc
acacattcaaaggtaacgtttgaaatgcataaagagagcctttcccaaatgtaccgggat
taccaaaggaaaggagatgaaggaagtggaacagttccttccacccctgttagaattatc
tcaggagttagcagagaagctgaaatcgcaaggaggcaacagcttgtggaggtgaaagaa
gctgctgcttctgcatatgttggggctgataccgtggagcacagtgctcaaaaaaatgag
acaaaagcctcatctgaatgtgagctacaaagtcattcaccatctaatgaagggaagaaa
tctgagggagaaaatggtcagagatcacctgacttaaagagagcaccttgcttagaattt
cctccacagacagaagcagtaaaaccgggggattcagaaatcacttctggaattgctgaa
gcaactgcagattctctgagtaaagctaaagaacttgtggaagaaacagcagctactgat
ggggcttctctaactgtacaaactgttttagaaggggagacacctgaaagcccagaaatg
ctggaggaatttacaccagaggtggaagatgatgactttgttgatttaaaagaggaaagc
aatctgcctttaccttcagaagagttggtactaaaacccagtgaagagaatagctcacct
gaaaatgaaagccaaataacagtagcaatgaacgaagaaactgttgagaaggaacctgag
acaatacctttagaatccaaaagtgctgaaatcttgaacaagacaagagaagaattggct
tccttgtcagaaacagtgacctctgaagtccaagaggagacaagtcaactaaattcagaa
gtgaatgagaagttagaggaattaaaacctgatggcagtgaaaccaaagcaattggagga
gatgcaaacacacatacttcagaagcttctgtgacctcagagaaaaaaattgccaagctt
gatgtttccagtgtagcatcagacacccagagactggaactaaaacccaacacaagcctg
gaagcaactcagcctcttagacccctacctgagatatcaaggcaggaagattcatcagga
caggacttggctactgcatctgatgggcagagaagagattccagatcaactatgtttcgt
attcctgaatttaagtggtcccagatgcatcaacgtttgctcacagatttacttttttct
atagaaacggatatacagatgtggagaagccattctacaaagactgtgatggactttgtg
aacagcagtgacaatgtcatctttgtacacaacacaattcacctcatctctcaagttatg
gacaacatgatcatggcttgtggtggtatattgccattgctttctgctgctacatctgct
acacatgaattagagaatatagagccaactcaaggactttcaatagaagcttcggtaaca
tttcttcagagattaatcagccttgtggatgtgttaatttttgcaagctctcttggcttc
actgaaattgagtctgagaaaaatatgtcatctggaggaattctgagacaatgccttcga
ctggtgtgtgcagtggcagtaagaaattgtttggagtgccagcagcatgcacaaatgaaa
cctattggagaaactgtaaggagtcagaaaacaatgcagagccttataggaacagggaag
tctgcagcaaagagtccagttgacattgtgactggtggaatttctccaatacgagacctt
gacagacttctgcaggatatggatattaaccggcttcgagcagtagtgttcagagatata
gaggatagtaaacaagctcagttcttggccttggctgtagtatattttatctcggtcctt
atggtgtcaaaatacagagacatactggaaccccagaatgaatggaggcaacctcatcgt
agccagtcattcaagggaacagagaatggaagtagtgaggcaatatctacagatgtagaa
aacccatctgctactactggtgcttcaactccagtatcaacagaagattctgaaagttca
gcacctgtacgaagaagagactcgggcattggagaggaatcaacttcaggtcaagcaaac
aattcagatgctgttgctgaagcaggaccacagagtgccagttcaggtccagacgctatc
agtgaagtattatgcacactttctttagaagtcaataaatctcaggaaaacaggagtgag
gcaggaaatgagttgactgagaagactgcatcttctgtaccatcttcaaaaaatgtcaac
gtaaaggacatcctcagaagcttggttagcaccccagcagatggtgccacagtggatcct
acccttctgccgccaaccttccttggaactcttggtgatactgctgctgagcagcatgtg
caattccgttcctttgacaggagtgttgttgtagctccaaagaagtcaacaatttcccct
tctacagctaccatgagtgtacccacaaatgctgtcagcgtggtttcttcattagattca
gcgcaggccccagacctgacaggagaatatcctggctgtggatcatctaattcaaaattg
ccacctgtgcctacggtttcttctgttccagaggattctgcttcaaatatgagtattaca
gagaggcttgaacatgctttggaaaaggctgcccctcttctgagagagatttttgtggat
tttgctccctttctttctcgcactcttttgggtagccatgggcaggagctgctgatagaa
ggtacaagtctggtctgcatgaaatctagtagttcagtggtggagttggtcatgttactt
tgctctcaggagtggcagaactcaatacagaagaatgcaggcctagcatttattgaactt
gtcaacgaaggaagattgctgagccaaacaatgaaggatcatttagtaagagtggcaaat
gaagcagaatttatcttaagtagacagagagcagaggatattcacagacatgctgaattt
gagtcgctgtgtgcccagtattctgcagataaacgagaggatgaaaagatgtgtgatcat
ttgataagagcagccaagttccgagatcatgtgactgcatcccaactcatacagaaaatt
atcaacattctgacagacaagcatggagcctggggaaattctgcatcgagacatccttct
ttatttgtggatgccagaatgggacacagtattccagcagcagtcactcgtcctcgtgag
ttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaac
ccccttggatcgacacatcctgaagcgacactaaaagcagctgtagaacatgctccagac
gaagacgtgcttcttaaaggaaagcagtccatcaagagtcaggttttaggaaatcagaac
tcggagagtgagattctcttggaaggcgacgatgataccttgtcatccattgaggagaaa
gatttggagaacttaattggtccagttagcctgtgtacaccagcacagcttgtggctccc
tctatagtagtgaagggcactctttccatcacctcttctgaactctgctttgaggtagat
gaagaagatcccagttttaagaaaatcgaccccaagattctggcttatacagagggactc
catggaaaatggctgttcacagagattcggtcaattttttcccgacgctatctcctgcaa
aatacagcattggagatcttcatggcaaacagagttgctgttatgttcaacttcccagac
ccagcaacagtaaaaaaagtggttaattgtctaccacgtgttggcattggcactagcttt
gggctaccacagaccagacgcatctctttggctagtccacgccagattttcaaagcttcc
aatatgacccagcggtggcagcacagagaaatttcaaactttgaatatctgatgtttcta
aacaccatagctggacgtacttacaatgacttaaatcagtatcccgtattcccctgggtt
atcactaactatgaatcagaagagttggatcttacgcttcctagcaacttcagggatttg
tcaaagccaattggtgctctaaatccaaagagagcagcattcttcgcagagcgatatgaa
tcatgggaagatgatcaggttccaaagtttcactatggcactcattactcaactgcaagt
tttgcgctcacttggttgttgagaattgagccctttacaacatttttcttacatgtacaa
ggcgggaagtttgaccatgcagatagaactttttcatcaatttcaagagcatggcgcaac
agccagcgtgacacttctgatatcaaggagctgattcctgaattttattatctcccagag
atgtttgtcaacctcaacaattacaatctaggtgtgatggatgacggaacggtggtatct
gatgttgaacttccaccatgggccaaaaccccagaagaatttgttcgcataaacaggctg
gccttggagagtgagtttgtttcatgccagcttcatcaatggatcgatctaatttttggc
tacaaacagcaagggccagaggctgtccgatccctgaatgtattctactacttaacctat
gaaggagcagtcaatctgagttcaataactgatcctgtattgagagaggctgttgaagct
caaatacgaagttttggacagacccctacccaactactcatagagccacatcctccaaga
agttctgccatgcaggtgtatctcctcctgcagagtccattgatgttcacagaccaagct
caacaggatgttatcatggttctaaagttcccatccaactcccctgtcactcatgtagca
gccaacacccagtctggtctggcaactcctgctgtgatcacagtcactgccaacaggcta
tttgctgtgaataagtggcataaccttcctgctcatcaaggtgctgtacaggaccagcca
taccagctgccagtggaaatcgatcctctcatagccagcaatacaagtatgcacaggaga
caaatcactgacctgttagaccagagcattcaggtccattcccagtgttttgtcatcacc
tctgacaatcgttatatcctggtatgtggcttttgggacaagagtttccgggtctattct
actgatacaggtaaactaatacaagtagtgtttgggcactgggatgttgtcacctgtctt
gcccgctccgaatcctacattggaggaaattgttacgttctctcaggatcacgtgatgca
acactgctgctctggtactggaatggcaaaaccaatagcattggtgataattcaagtggt
gattttgccactccccgagccatcttgacaggacatgactatgagatcgtttgtgctaca
gtttgtgctgaacttggtctggtaataagtggtgctaaagaaggaccatgtctcatacat
tctatgaatggagacctattgaggacattagaaggtcctgaaaactgcttgagaccaaaa
cttatccaggcttcaagagagggccactgtatcatatactatgaaaatggccttttctgt
gtattcagtgtgaatgggaaacttcaagccactatggaaacagatgacaaaataagggca
atccagctgagccgtgatggacagtatctccttacaggcggagacaatggggtcatcata
gtatggcaagtgtgtgacctcaagcaactttttgcttaccccggctgtgacgctggaatc
cgttccatggccctgtcatatgaccaaaggtgtataatgactggcatggcttctgggagc
atagtgcttttctacaatgatttcaaccgatggcatcatgaatatcaaaccagatactga
DBGET
integrated database retrieval system
