Caretta caretta (Loggerhead turtle): 125635846
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Entry
125635846 CDS
T09292
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125635846 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125635846 (NUP54)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125635846 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
125635846
NCBI-ProteinID:
XP_048704056
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All DBs
Position
4:complement(10045739..10070140)
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AA seq
554 aa
AA seq
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MAFNFGAAAGAAAANPTGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSAP
PFNFGNSLASAGAFGGFGTTTTAPGSVFSFSAPTNTGTAGLFGATQNKGFGFGTGFGGAG
TGTGLGTGLGTGLGFGGFSTQQQQPTLGGLFSQPTQAPSQSNQLINTASALSAPTLLGDE
RDAILAKWNQLQAFWGAGKGYFNSNIAPVEFTQENPFCRFKAVGYSCMPNNKDEDGLVVL
VFNRKEADIRNQQQQLVESLHKILGGNQTLTVNVEGVKTLPDDQTEVVIYVVERSPNGTS
RRVPATTLYAHFEQVNIKTSLQQLGVTLSMARTELSPAQIKQLLQNPPAGVDPIIWEQAK
VDNPDPEKLIPVPMVGFKELLRRLKVQEQMTKQHQTRLDIISEDISELQKNQTTTMAKIA
QYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFKGRLNE
LMSQIRMQNHFGAVRAEERYYIDADLLQEIKQHLKQQQEGLSHLISIIKDDLEDLKLTEH
GLNESIPIRGGIFS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggcagccgccggcgccgccgccgcgaacccgacaggatttggt
gggcttgagactgcaaactccactgccagtgggtttaattttgggggtttcggattaact
gccaatcctgcagtgaattttaatattgggaatttcggtgtgtccactacctcagcgcca
ccattcaattttggtaacagtctggcaagtgcaggtgcttttggaggatttgggacaact
accaccgctcctggatcagtatttagcttttctgctcctaccaacacaggcaccgctgga
ctgtttggtgctacccaaaacaaaggttttggatttggtactggttttggcggagcagga
actggtaccggcctaggtactggtttaggaactgggttaggctttggaggattcagtacc
caacagcagcagcccacattaggtggcttgttcagtcagcccactcaggcaccttcccag
tccaaccagctgataaacacagccagtgcactttctgctcccactctcttgggagatgag
cgagatgctattttggcaaagtggaaccagttgcaagccttctggggggcaggcaaagga
tattttaacagcaacattgctccggtggagttcacgcaggaaaacccattttgcagattt
aaggctgtgggctacagttgcatgcccaacaacaaggatgaagatggcctggtggtctta
gtcttcaatagaaaagaagcagacattcgaaaccagcagcagcagctagtagaatcactg
cacaaaattttgggaggaaaccagacccttacggtcaacgtagaaggtgttaaaacactg
ccagatgatcagactgaagttgtcatttatgttgttgagcggtcaccaaatgggacttca
aggagagttccagccacaaccctgtatgctcattttgaacaagttaacataaaaacatca
ctgcagcagcttggagttaccctttccatggccagaacagaactttctccagcacaaatc
aaacagcttctacagaatcctcctgctggtgttgatcctattatctgggaacaggccaaa
gtggataatcctgatcctgaaaagcttatccctgtaccaatggtaggtttcaaagagctg
ttgagaagattaaaggtccaagagcagatgactaagcagcatcagaccagattagatata
atatcagaagatattagtgagctgcagaaaaatcagaccacaactatggcaaaaatagca
cagtacaagagaaaactaatggacctttctcatagaaccttacaggtgttaattaaacaa
gagattcaaaggaaaagtggctatgccattcaggctgatgaggaacaacttcgtgtacag
ttagacaccattcaatgtgaactcaatgcacctactcagttcaagggtcgactaaatgaa
ctgatgtctcagatcaggatgcaaaatcattttggagcagttagggcagaagaaaggtac
tacattgatgcagatctcctacaagaaatcaagcaacatttgaagcagcaacaagaaggc
ctgagtcatttgattagcataataaaagatgacctggaagatctaaaactaacagaacat
ggattgaatgagagcatccctatcagaggaggaatcttcagttga
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