Caretta caretta (Loggerhead turtle): 125635912
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Entry
125635912 CDS
T09292
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04020
Calcium signaling pathway
ccay04144
Endocytosis
ccay04510
Focal adhesion
ccay04540
Gap junction
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125635912 (PDGFRA)
04020 Calcium signaling pathway
125635912 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125635912 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125635912 (PDGFRA)
04540 Gap junction
125635912 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125635912 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccay01001
]
125635912 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccay04090
]
125635912 (PDGFRA)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125635912 (PDGFRA)
Protein kinases [BR:
ccay01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125635912 (PDGFRA)
CD molecules [BR:
ccay04090
]
Proteins
125635912 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C1-set
Motif
Other DBs
NCBI-GeneID:
125635912
NCBI-ProteinID:
XP_048704237
LinkDB
All DBs
Position
4:complement(81828198..81876096)
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPRTFLLLGCLLTGPWLTFCQLPLPTVLPNRDEMVVQLNASFTLKCSGDSEVTWQYP
LAEGSHRIDIRNEENNSGLFVTLLEVGNASAAHTGLYTCYYNHTQEEDGELEGKDIYIYV
PDPEMPFVPLLPEDQFILVEDGDSTIIPCRTSDPNAQVALIDSEAKVVYAYYDSKQGFLG
NFPAGSYTCQTTVKGMEFKSDQFFIYILKATSELPVEIEALKTVYKTGEKIVVTCVVFDN
EVVNLQWNYPGKVKEKGVIKVDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKRVVITVHDKGFIHLDPQFSPLEAVNLHEVKNFVVDVQAYPAPKMFWLKDNVTLTENL
TEIVTSSNKINETRVQSILKLIRAKEEDSGDYTLVAENGEETKSYTFSLLIQVSASILDL
VDDHHGSGGGQTVQCLAKGTPFPDVEWLICKDIKKCSNDTSWMLLTNNISDIHMEAHQVD
KDQVESQVTFQKVEETLVVRCMARNTLGAVTRELKLVAPTLRSELTVAAAVLVLIVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENNGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSMYDRPASYKKKSVSEPEVKN
LLSDDNSDSLSLLDLLSFMYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSSFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGEYKK
SYERIHLDFLKSDHPAVTRMRVDCDNTYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccaaggacattcctgctcctgggatgtctcctgacaggaccatggcta
actttttgccagcttccattgccgactgttcttccgaatagagatgaaatggtcgtgcag
ctgaatgcctcatttactctgaaatgctctggagacagcgaagtgacctggcaataccca
ctggccgaaggaagccacaggatagacattagaaatgaagagaacaacagtggtctcttt
gtgactttgctggaagtggggaatgcctcagctgctcataccggattatacacttgttac
tacaatcatactcaagaggaggacggggagttggaggggaaggatatctacatctatgtg
cctgatccagaaatgcccttcgttcctctgctaccagaggatcaattcatcctagtagaa
gatggtgattccaccattatcccttgtcgtacaagtgaccctaatgctcaagtagcttta
attgacagtgaagccaaggttgtatatgcctattatgacagcaaacaaggtttcctagga
aattttcctgcaggctcatacacgtgccaaacaactgttaaaggaatggagttcaagtca
gatcagtttttcatctacattttgaaagctacttcagagctgccagttgagattgaggcc
cttaaaactgtatataaaacaggcgaaaagattgttgtaacttgtgtggtctttgacaac
gaggtggttaatttacagtggaattatccagggaaagtgaaagaaaaaggtgtgataaaa
gttgatgacattaaagttccatcccagaagctggtttacactttgactattcctgaggct
tcagtgaaagataccggggattatgaatgtacggcccgacatgcaaccaaggaggttaaa
gaaaataagagagtagtcattacagttcatgataaaggattcattcatctggatccccaa
tttagccctttggaagctgtcaatttacatgaggtcaaaaattttgtagtggatgtgcag
gcgtacccagctccaaaaatgttctggctgaaggacaatgtgactctgactgagaatctt
acagagattgttaccagctcaaacaagatcaatgagacaagggtccaaagtatattaaaa
ctgattcgggccaaggaagaagacagtggagattatactttggttgctgaaaatggagaa
gagactaaaagctatactttctcattgctaatacaagtgtcagcttcaattctagacctg
gtggatgatcaccacggctctggagggggacagacggtccaatgcttggcaaaagggacg
cctttccctgacgtggaatggctgatatgcaaggacattaaaaaatgcagtaatgatacc
tcatggatgcttctgactaacaacatctcagatatacacatggaggctcatcaggttgat
aaggaccaggtggaaagccaggtgaccttccaaaaggtagaagaaaccctggtagtacgg
tgcatggcgaggaacactcttggtgccgttactcgggaactgaagcttgtggcgcccaca
ttgcgatcagaattaactgtggctgcagcagtcctagtgttaatagtgattgtgattatt
tcactgattgtcctggtcatcatatggaaacagaaaccaaggtatgagataagatggaga
gtcattgagtccatcagccctgatggccatgagtacatttatgtggacccaatgcaactg
ccctatgactcaagatgggagtttcctagagatggattagtacttggtcgaatccttggt
tcaggcgcgtttgggaaagttgttgaaggaactgcatatggattaagtcgctctcagcca
gtgatgaaggtagctgtgaaaatgctgaaacccacagctagatccagtgaaaaacaggca
ctaatgtctgaactgaagataatgacacatcttgggccccatttgaacattgtgaatctc
ttaggagcttgtactaaatcaggtccaatttacatcattactgaatactgcttttatggg
gatttggtaaactacctgcataaaaacagggataatttcctgagccgacatccagaaaag
ccaaagaaggacttggacatttttgggatgaacccagctgatgaaagcactagaagttat
gtcattttatcctttgaaaacaatggagaatacatggacatgaaacaagctgatacgact
cagtatgtgccaatgttggaacggaaggagggttctaagtattcggatatccagagatca
atgtatgatcggcctgcttcatataagaaaaaatctgtgtcagaaccagaagtcaaaaac
ctgctttctgacgacaattctgacagcctcagtttgctcgatttactaagcttcatgtac
caagttgcacgggggatggagttcttggcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtccttctggctcaaggaaaaattgtgaagatctgtgactttggtctggct
agggacatcatgcatgattccaactatgtctccaaaggcagcacttttctcccagtgaaa
tggatggcacctgaaagcatttttgacaatttgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggagatattttctcttggtggcacaccataccctggcatgatg
gttgattcttctttctacaacaagataaaaagtggctaccgaatggcaaaacctgaccat
gctaccagtgaagtgtatgagattatggtgaaatgttggaacagcgaaccggagaaaaga
ccttctttttaccatttgagtgaaattgtggagaatctgttgcctggcgagtacaagaag
agctatgaaaggattcatctggacttcctgaaaagcgaccacccagcggtcacacgcatg
agagtggactgtgacaacacctacatcggtgtcacttacaagaatgaagacaagctaaag
gacagggagagtggatttgatgagcagaggttgagtgctgacagtggctacatcatcccc
ctgcccgacattgatcccgtctccgaggatgaactcggcaaaaggaacaggcacagttcc
cagacatctgaagaaagtgccattgagactggttctagcagctctacctttatcaagcga
gaggatgagaccattgaggacattgacatgatggatgacattggaatagattcctcagac
ctggttgaagacagcttcctgtaa
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