Caretta caretta (Loggerhead turtle): 125635917
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Entry
125635917 CDS
T09292
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125635917 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125635917 (FIP1L1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125635917 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
125635917
NCBI-ProteinID:
XP_048704255
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Position
4:complement(82381795..82451784)
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AA seq
630 aa
AA seq
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MSTGEVERLAADLSGTGGDEEEEWLYGDENEPERPEEQKASAPPPSANEEEAAENGVVKT
KVTEAEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGYGTAPVNLNIKTGGRVYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKIMAEDNSMEVTPGAEIQDGRYNLFKVQQGRTGNMEKEVAVQLTKAEF
TSPPPLFKSGIPTNSYQMVLKSNSAGNSKNLKAFYHSIVDVTDDGSGNVLSHPVPLFPNS
RNSTSSQSQTSTASRKASSGIGKWQERYGRDESPELRRLSGTIDVIGQTITISRVEGRRR
ANENSNIQVLSERSSADVDSFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPG
IPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSARAFPFTFPHLAGSAPSWPSLVD
TSKQWDYYARREKDRERERERDRERDRDRDRDRERERTRERERERDHSPTPSVFNSDEER
YRYREYAERGYERHRTSREKEERHRERRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHK
HKKSKRSKEGKEASGEPAPEQETTEAAPVE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggcgaggtggagcggctggcggcggacctgagcgggaccggcggggatgag
gaggaggagtggctctatggcgatgaaaatgaaccagagagaccagaggaacaaaaagct
agtgctccacctccttctgcaaatgaagaggaagctgctgaaaatggtgtagtgaaaacg
aaggtgacagaggctgaggatgacagtgacagtgacagcgatgatgatgaggatgatgtt
catgtcaccataggagatattaaaacgggagctccacagtatggctatggaacagctcct
gtgaatctcaacatcaagacaggaggtcgagtttatggatcttctggtgcaaaagtcaaa
ggagttgatcttgatgcaccaggaagtattaatggtgttccactgctggaagtagattta
gattcttttgaggataaaccttggcgaaaaccaggtgctgatctttcagattatttcaat
tatgggtttaatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatg
ggactcgaaattttaccagttacctcaactacaaataaaattatggccgaagacaattct
atggaagtaacaccaggtgcagagattcaagatggcagatacaatctttttaaggtacag
cagggcagaactggaaatatggagaaggaggtggcagtgcaattgaccaaagctgagttt
acgtctcctcccccactgttcaaatcaggaatcccgacaaacagttatcaaatggtcctg
aagagcaattctgctggcaactcaaaaaacctgaaggcattttatcatagtatcgtagac
gttacagatgatggcagtggaaatgtattgagtcatccagtcccactcttccccaattca
agaaacagcacctcttctcagtcacagacaagcactgcttccagaaaagccagttcaggc
atcgggaagtggcaggagcgatatgggagggacgaatcacctgaactaaggagattgtct
ggtacaatagatgtgattggacagaccatcactatcagcagagtggaaggaaggcggcga
gccaatgaaaatagcaacatacaggttctttcagaaagatccagtgctgatgtagacagt
tttaccaagccacctccatttttccctccaggagctccacctacccaccttccaccccct
cctttcctcccaccccctccaactgtcagtactgctcctcctctgattcccccaccaggt
ataccaataactgtgccaccaccaggttttcctcccccacctggaggtccgccaccttct
cttataccaacaatagaaagtggacattcctctggctatgacagccgctctgctcgtgca
tttccgttcacctttccgcaccttgcaggttctgctccttcgtggcctagtcttgtggac
acaagcaaacagtgggattattatgcacgaagagagaaagatagggaacgagagagagag
agagaccgagagagggatcgtgatcgggatcgtgatagggaacgagaacgtaccagagag
agagagagggaacgtgatcacagcccaactccaagtgttttcaacagtgatgaagaacga
tacaggtacagagaatatgccgaaagaggctatgagcgtcacagaacaagcagagagaaa
gaggaacgacacagagaaaggagacatagagaaaaagaagagactcgacacaaatcatct
cgaagtaacagcaggcgtcgtcatgacagtgaagaaggggacagccacaggaggcacaaa
cacaaaaaatccaaaagaagcaaagaaggaaaagaagctagtggtgaacctgcccctgaa
caggaaaccactgaagctgctccagtggaatag
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