Caretta caretta (Loggerhead turtle): 125635950
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Entry
125635950 CDS
T09292
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125635950 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125635950 (CNGA1)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125635950 (CNGA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Zip
DUF789
NPR3
TM-like_Thioredoxin-like_C
PhoU
Sec62
DUF4746
Connexin
Motif
Other DBs
NCBI-GeneID:
125635950
NCBI-ProteinID:
XP_048704345
LinkDB
All DBs
Position
4:84296081..84314229
Genome browser
AA seq
730 aa
AA seq
DB search
MKVGVINTHRSYINVPRLAVQNADAGVGRIENRNRRSLAEVYDSSSILQTQEHGDSCPGY
SSTNNSQAVKGVLQRISNFLVTLKYWKKRVSDEGCQTSDSFLEKIQGPQLRWSNNFNNQN
LCGEISEEIMEHYLPSAIAQYNINNNSNKDEEKQKKEKKGKSDGKKEKKKDTEMQKNKEK
KEKHRNKDKHKKKDKKEEEKKDLFVIDPSGNLYYYWLFCITLPVMYNWTMIIARACFDEL
QNDHLGMWFIFDYISDLIYIADMFVRTRTGYLEQGLLVKEELKLKQKYTGTLQFKLDLLS
VIPTDLLYFKLGLTYPELRINRILKVSRMFEFFQRTETRTNYPNIFRISTLVMYIVIIIH
WNACVYYSISKAIGFGADTWVYPNTSDPEFARLARKYVYSLYWSTLTLTTIGETPPPVKD
SEYFFVVVDFLVGVLIFATIVGNIGSMISNMNAARAEFQGRIDAIKQYMHFRNVNKEIEK
RVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAISVHLDTLKKVRIFADCEAGLLVELV
LKLQPQVFSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNI
KGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALIEYPDAKALLEEKGKEILLKDGLLDID
VANTGSDPKNIEEKVIQMEGAVDNLQTKLARLLAEYDATQQKLKKRLTEVEKILKSTMQF
EFSDLEELDK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttggtgtgattaacacccatcgctcctatataaatgttcccagactggcagta
cagaatgctgatgcgggcgttggaaggatagagaatagaaacaggaggtctctggctgaa
gtgtatgatagttcatccatattacaaacacaggagcatggggacagctgccctggttat
tcttccacaaacaactcacaggcagtgaaaggagtgctacagagaatatccaactttttg
gttactttaaaatactggaagaagagggtttctgatgaaggctgccaaacctcagactct
ttcttggaaaaaatccaaggtccacagctaagatggagcaataattttaataatcagaat
ctctgtggtgagatatcagaagaaatcatggaacattacctacctagtgccattgcacag
tacaatatcaacaacaacagtaataaagatgaggagaaacagaaaaaagaaaagaagggc
aagtctgatggtaaaaaggaaaagaaaaaggacacagaaatgcaaaagaacaaggaaaaa
aaggaaaaacacagaaataaagataagcataagaagaaagacaagaaagaggaggagaag
aaagatctttttgttattgatccatcaggaaacttgtattactactggctgttttgcatc
acattacccgtcatgtacaactggaccatgatcattgcaagagcctgttttgacgaactt
cagaacgaccatttaggaatgtggttcatttttgattatatatcagatctaatctatatt
gctgatatgtttgtgcggacaagaacaggttatttggagcaaggtttgttggtgaaagaa
gaacttaaacttaaacagaaatatacaggaactttacaatttaaactagatctactgtca
gtcataccaactgatctactgtactttaaattaggtctgacctatccagaattaagaata
aacagaatacttaaagtatctcgtatgtttgagttcttccagcgaacagaaacaaggaca
aactatccaaatatcttcaggatctctactcttgtcatgtacatagtgattattattcac
tggaatgcatgtgtgtactattctatctccaaagccattggatttggggcagacacatgg
gtctatccaaacacctctgatcctgaatttgcccgtctggcgagaaaatatgtatatagc
ctctactggtcgacgctgaccttgaccactattggggaaacacctcctcctgtaaaggat
tctgagtacttctttgtggttgttgacttcttggttggggtgttgatttttgctactatt
gttggtaacattggttctatgatctccaatatgaatgcagccagagcagagtttcaagga
aggattgatgctatcaagcagtatatgcactttcgaaatgtgaataaagaaatagaaaaa
agagttattaagtggtttgactacttgtggacaaataaaaaggcagtggatgaaagggaa
gttttaaaatatctaccagataaattaagagcagagattgcaatcagtgttcatctggac
acattaaagaaagttcgaatttttgcagattgtgaagctggcttgttagttgaattagtc
ttgaaactgcagcctcaagtcttcagtccaggagattacatctgccgaaagggggacatt
ggacgagagatgtacattatcaaagaaggtaaacttgctgtagtagctgatgatggaatt
acacaatttgtggtcttaagtgatggcagctactttggggagattagcatacttaatatt
aaaggcagcaaagctggcaatcgaagaacagccaacattagaagcattggatactcagac
ttattttgtctatctaaagatgacctcatggaggctttaatagaatacccagatgcaaag
gccctgctggaagagaaaggtaaggaaatcttgctgaaggatgggttactggatatagat
gttgcaaatacaggaagcgaccctaaaaacattgaagaaaaggtcattcaaatggaagga
gcagtggacaacttacaaaccaagcttgccaggcttttggctgagtatgatgccacacag
cagaaactgaaaaaacgactgacagaggttgagaaaatactgaaatcaactatgcagttt
gaattctcagatttagaagaattagataaataa
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integrated database retrieval system
