Caretta caretta (Loggerhead turtle): 125635959
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Entry
125635959 CDS
T09292
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04080
Neuroactive ligand-receptor interaction
ccay04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125635959
04082 Neuroactive ligand signaling
125635959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125635959
Ion channels [BR:
ccay04040
]
Ligand-gated channels
GABA-A
125635959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125635959
NCBI-ProteinID:
XP_048704368
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All DBs
Position
4:85210022..85471579
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AA seq
554 aa
AA seq
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MVSAKELVIAMSSGLCITLLHFLCLATCVTEPPGQIKKEEKLWPENFTSILNSLLDGYDN
RLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRLNN
MMVSKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMKLVDFPM
DGHACPLKFGSYAYPKSEMIYTWTKGPEQSVEVPEESSSLVQYDLLGHTVSTETVKSITG
EYVVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT
LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQLEKAKRKTVKSLLE
FPILPVQREQCTEEALMTTDANSNVRKRTNAMAQSEADGGNRTDTANSSTQPSGVTQGSS
DITPQSLSASSPNPFSRLSVSETLSSARATPPAPPSTPILTGCITQHITAGSPSIHHLLG
SRLEQIQTTANTVGASVKPSAISPSPAPPASSSGTSKIDKYARILFPVTFGAFNMVYWVV
YLSKDTMEKSESLM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgccaaggagctagtgatcgcgatgtcctcgggtctctgcatcaccctcctg
cacttcctgtgcctggcgacctgcgtcaccgagcccccggggcagatcaaaaaggaggag
aaattatggccggagaattttacaagcatcctgaacagtctcctggatggttatgacaac
aggctgcgtcctggatttgggggtcctgttactgaagtcaaaacagatatatatgtcacc
agttttggaccggtttctgatgtagaaatggaatacacaatggatgtcttctttcgtcag
acatgggtggacaaaagattaaaatatgatggtcccattgaaattttaagacttaataat
atgatggtttcgaaggtgtggacaccggacacttttttcaggaacgggaaaaaatccgtc
tcgcataatatgacagccccaaacaaactctttagaataatgagaaatggcaccatctta
tacacaatgaggcttaccataagtgcagaatgtcccatgaaattagtggattttccaatg
gatggtcatgcttgtcctctcaaatttgggagttatgcatatccaaagagtgaaatgatt
tacacctggacaaaaggacctgagcagtctgtggaagttcctgaagagtcttccagttta
gttcagtatgacctgcttgggcatactgtatccactgaaactgttaaatctattacaggt
gaatatgttgttatgacagtttacttccacctcagaaggaaaatgggttattttatgatt
cagacatatatcccgtgcattatgaccgtgatcctctcgcaagtgtcattttggataaat
aaggaatctgttccagctagaactgtatttggaataacgacagttttgacaatgacaacg
ttgagcatcagtgcaaggcattcgttgccaaaagtatcctatgccactgccatggactgg
ttcatagctgtctgctttgcctttgtgttctctgctcttattgaatttgctgctgtcaac
tattttactaatgttcaactggaaaaggccaaaaggaagacagtgaaatcactccttgaa
tttccaatcttgccggtgcagcgagaacagtgcacagaagaggcactcatgactacagat
gccaattcaaatgtgaggaaaagaacaaatgccatggcacagtcagaagccgatggtggg
aaccgaactgacacagcaaacagttccacccaaccttctggggtaactcaggggtcttct
gacattacaccccagtctctttcagcatcaagtccaaacccgttcagtcgcctcagtgta
tcagaaacattgtcttctgcaagagctactcctccagctcctccctccaccccaatttta
actggatgcataacccagcatatcacagctggatccccatctattcatcatttacttgga
tctagactggagcagattcagaccacagctaatacggtgggagcatctgtaaagccgtct
gctatctctccgtctcctgctccccctgcttccagctctggcactagtaagatagacaaa
tatgcacgcattctatttcctgtcacatttggagcatttaacatggtctactgggtagtg
tatctatccaaggacaccatggaaaaatcagaaagtctaatgtag
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