Caretta caretta (Loggerhead turtle): 125635987
Help
Entry
125635987 CDS
T09292
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125635987 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
125635987 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
125635987
NCBI-ProteinID:
XP_048704438
LinkDB
All DBs
Position
4:complement(88189020..88502088)
Genome browser
AA seq
1668 aa
AA seq
DB search
MASPRRELEEVAPLPQQQAARPEPAFGEARRWIEQVTGRSFGDKDFRSGLENGILLCELL
NAIKPGLVKKINRLSTPIAGLDNTILFLRGCKELGLKESQLFDPGDLQDTSNRTTIKNID
NSRKLKNVLVTIYWLGKAANRCTSYSGATLNLKEFEGLLAQMRKETEDIESPKRNIRDSG
YIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLP
HRKMPDVKKDDMSARRTSYGEPKSVVPFNQYLPNKSNQTAYIPAPLRKKKAEREEYRKSW
STATSPLGGEKPFRKNHPETIEEEQSEAPRRHEEEQVGCMASRTNPSKSQVDLNQNKGET
IGQFPSGSAKETSVHKCKEKDAEEIRKLRRLEQAGIKVMPAAQRYGSQKQICEDSEPTPD
VILHKEKPSMMHYQGKDSGSEDEAVCRVPDLEKDDFAARRARLNQPKLTVSFNQFLVGPC
TNKDKGKLEGVKKPSQKEKQEYARANQVHMASARQIVTHKENPFLQSQDPESEKEEQVKV
PDIQRDDLAKRKIQSNLTQQQESPVFVKASITQADLETWDRLKVSEELSEVAGSGTDEYC
QGIQLAACIVSQNQTPRRVSEWHESREEELDGSSPNSWRDDMMTRRMGTFQRQTSPVCMP
YSPMSVAHHPLQQQKEVIHKRDLKTPQKAESSLPLNCTMEQHHGTVSPASVGCNVTRDES
HEKLKDHDQSRGGTKHQVRIPDPRRDDMMARRTGAFLKQPGPSVKQFLPVPFSKQQSSQE
GTKELVKPEKKVKSTTTGSINHEKCPRICANSPQRLAMQPQHREEKEQERQHLPDTGQDV
ASTIHMSSHSLDQIHPDQTSQLQKVPERNKKVVSSRDEQLQTFGPRTAVSDDAESLSMFD
MRCEDEAVMQPHSKARHEKLQHIHNQLKEDEDRWQDDLARWKSRRRSASQDLIKKEAERK
KMERLLSGSDGTSERRKSIKTYREIVEEKERREKELHEAYKNARSREEAESILQQYIERF
TISEAVLERLEMPKILERSHSVEPNSSSPLKDPNPMRYLRQQSLPPPKYTATIEATIVPI
SESEASVSTGQTSPSKTVVSKAVPMLTPKPYAQPKNTQQVLKTFKVDGKVCMNGETFNGL
EEKDKECTTVIFAPSLRRSPKFEGVTEDGSLVELKQDTTSIELSLKRPATHTVHRELTAS
FTEEVKPANQKDETDAGRPEMMNLGFASPGAEQKQFKTTVTCARPAVPSVEFPLSTHSEE
AASKDKDLKKPETEQQKEAEILVTQKVVKSSAPEQEGVILFPFLKKVPETSQVILQNSDQ
QADSDNSDKSNCFSFWSWDPEEERKRQERWQQEQERLLQERYQKEQDKLKEEWEKAQKEV
EEEERRYYEEERKIIEDTVVPFTVSSSSAEPLSTSSSVTEGNGTMNMMELSDSQEEEKQK
EIKRQQKLPWEQKGASLAKNKKSEPCLEKKSSVNKVPTEHPETILQRGSEQDHQVSVTEH
SSHAILNLPLTQVFSLPHSVTSDVSWNQQLLMKQSPHISEEVRQKTSLDQSTGQQANSPG
ERRRTGCHENFRPGLSSPCSPTPQSHSPNRSVSGKKLCSTCRLPLGKGAAMIIETLGLYF
HINCFRCGICKGELGDAASGTDVRIRNGLLNCNDCYVRSRTAGQPTTL
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctcggcgagagctggaagaggtcgcgccgctgccgcagcagcaagctgcc
cgccctgagccagccttcggcgaggcgcggcgctggatcgagcaagtcacaggcagaagt
tttggtgacaaagattttcgttctggattagaaaatggtattctgctttgtgagttactg
aatgcaataaagcctggactggtaaaaaagatcaatagactgtcgacccctattgcaggg
ttggacaacaccatcttattcttaagaggctgcaaagagctggggcttaaagaatctcaa
ctttttgacccgggtgaccttcaggacacatcaaacagaacaacaatcaagaacattgac
aacagtaggaagctgaaaaatgtactagttaccatttattggctggggaaagcagcaaac
agatgcacttcatacagtggagcaacgctgaacctgaaggagtttgaaggattgctggca
cagatgagaaaggaaaccgaagacattgagagccccaaacgcaacattcgtgacagtggt
tatattgattgttgggactctgaacgcagcgattccctttccccccctcgccacggcaga
gatgattcctttgacagtctggattcatttggttcccgctcacagcagacaccgtctcca
gatgtagtgctcagaggaagcagcgatgggagaggcagtgactctgagtctgacttgcca
caccgaaagatgccagacgtgaaaaaagatgatatgtctgcaaggcggacgtcgtatggc
gaacctaaatcagttgtgccttttaaccagtatctcccgaataagagtaaccagactgcc
tatataccagctcctcttcggaaaaagaaagctgaacgagaggagtaccggaagagctgg
agtactgctacttcaccacttggaggagagaagcctttccgcaaaaaccaccctgaaacc
atagaagaagaacaaagtgaggcaccaagacgacatgaagaggagcaggtgggatgcatg
gcttccaggacaaaccccagtaaaagtcaagtagatttgaatcaaaataaaggagagacc
ataggtcagtttccttcaggtagtgccaaagaaacttcagtgcacaagtgtaaagagaaa
gatgcagaggagatcagaaagttaagaaggcttgaacaagctggtattaaggtcatgcca
gcagcacaacgctatggcagtcaaaagcaaatatgtgaagatagtgaacctaccccagac
gtcatccttcacaaggagaaaccctctatgatgcattatcaagggaaggattctggatca
gaagatgaagccgtgtgcagagttcctgatctagaaaaggatgactttgcagcccggaga
gcaagactgaatcagcccaaacttacagtgtcatttaaccagtttttagttgggccctgt
acaaataaagataaaggtaaactggaaggtgttaaaaagccatcacagaaggaaaaacag
gaatatgccagagcaaaccaggtacatatggcatcagcgaggcaaattgttacacataaa
gaaaacccattcctgcagtctcaggatcccgagtcggagaaggaagagcaggtgaaagtg
cctgatattcaaagagatgacctagctaaacgaaagattcaaagtaaccttacccagcaa
caagagtctccagtgtttgtgaaagcttctataacacaagcagatttggagacgtgggac
agactgaaagtgtctgaggagctcagtgaagtagcagggtcaggtacagatgaatattgc
caaggaatccagttggctgcctgtattgtctctcagaaccaaactccacgcagagtgagt
gaatggcatgaaagcagggaggaagagcttgatgggagttcaccaaacagttggagagat
gatatgatgactagaaggatgggaacctttcagaggcagactagcccggtttgtatgcca
tattctcccatgtcagttgcccatcatccactgcagcaacagaaagaagtaattcataag
agagacttgaagactccacagaaagcagaaagcagtttgcccttgaactgcacaatggaa
caacatcatggaacagtttcacctgcctccgtgggctgcaatgtgacaagggatgagagc
catgagaaactgaaagatcatgaccaaagtaggggtgggacaaaacaccaagtgagaatt
ccagatccaagaagagatgacatgatggcaagaagaactggagcttttctaaagcagcct
ggaccaagtgttaaacagttccttccagttcctttttcaaagcagcagagtagccaggag
ggaactaaggaacttgtaaagcctgaaaagaaagtgaagagcaccaccactggctcaatc
aaccatgaaaaatgtccacgaatctgtgctaacagtcctcagagactggcaatgcagcct
caacacagagaagaaaaagagcaagaaagacaacatctccctgatacaggacaagatgtg
gcttccactattcacatgagtagtcatagtcttgatcaaattcacccagatcaaacttca
cagcttcagaaagttcctgagagaaacaaaaaagtggtgtcatccagagacgaacaactg
caaacattcggccccagaactgctgtgtctgatgacgcagagagtctgagtatgtttgac
atgaggtgtgaagatgaagctgtgatgcagcctcacagcaaggctcgccatgaaaaacta
cagcatattcacaaccaactgaaagaggatgaggacagatggcaagacgatctggcacga
tggaaaagtcgcagaagaagcgcttcacaggacctaattaaaaaagaagcagagagaaaa
aagatggaaagattattgagtggcagtgatggaacaagtgagcgaaggaaaagcatcaag
acttacagagaaattgtggaagagaaagagagaagagaaaaggagctgcatgaggcctac
aagaatgccaggtcacgtgaggaggcagagagcatactccaacaatacattgaaaggttc
accattagcgaagctgtccttgaacgcttggagatgccaaaaattctggaaagaagccat
tcggtggagccaaattcatcatcaccactgaaggacccaaatcctatgagatacttacgg
caacaatcactgcctcctccaaaatacactgccacgatcgaagcaaccattgttcccatc
agcgaatcggaagccagtgtttcaacaggccaaacatctccaagcaaaactgttgtctcc
aaggctgtgcctatgctgacacccaagccttacgcacaacccaaaaacacacaacaggtc
ttgaaaacatttaaggtagatggaaaagtctgtatgaatggcgaaaccttcaatggactt
gaagagaaggataaagaatgtacaacagtgatatttgctccttcactaagaagatctcca
aagtttgaaggggtcacagaggatggatctctggtggaactgaaacaggacaccactagc
attgagctcagtttaaagaggcctgccactcacactgtgcacagagagctgacagcctcc
ttcactgaagaagttaaaccagccaaccaaaaagatgaaactgatgctggaaggccagaa
atgatgaatttggggtttgcttcaccaggtgcagaacagaaacaattcaagacaactgtt
acttgtgcccgccctgctgtgcccagcgtggagttccctcttagcacccattctgaagaa
gcagcttcaaaagataaagatctgaagaaacctgagacagaacaacagaaggaagcagag
atcctagttacacagaaggtagtgaagtcaagtgctccagaacaagaaggggttatatta
tttccatttttgaagaaagtacctgagaccagccaagttattctgcagaactctgatcaa
caagcagactctgataatagtgacaagtcaaattgtttcagtttctggtcctgggatcca
gaagaggaacgaaagcgacaggaaagatggcagcaagaacaggaacgcttgcttcaagag
aggtaccagaaggagcaggacaagctgaaagaagaatgggaaaaagcacagaaagaagtt
gaagaggaggagcgtagatactatgaggaggagcgcaagataattgaggatactgtagtt
ccgttcactgtttcttcaagctctgctgaacccctctccacttcttcctctgtcactgaa
ggaaatgggacaatgaacatgatggaactgagtgactctcaagaggaagagaaacaaaag
gaaattaaaagacagcagaaattaccctgggagcagaagggtgcatcattagccaaaaac
aagaaaagtgagccatgcctggaaaagaaaagcagtgtaaataaagtgcccacagaacat
ccagagactattcttcagaggggaagtgagcaggatcaccaggtgtcagtgacagagcac
agctcacatgccatactgaatctaccattgactcaggtattcagtttaccccactctgta
acttcagatgtgtcgtggaatcagcagttgttaatgaaacagtcaccacacatttcagaa
gaagttagacagaaaacatctctggatcagagcacaggccagcaggctaattccccaggc
gaaaggagaaggacaggctgtcatgagaatttcaggcctggactgtcatctccatgttct
cctacacctcaaagccactcacccaacaggtctgtcagtggaaagaaactatgttctacc
tgtcgtcttcctcttggaaaaggagctgccatgattattgaaacacttggtctatatttt
cacattaattgcttcaggtgtggaatttgcaagggagagcttggagatgcagcaagtgga
acagatgtcaggattagaaatggtcttctcaactgcaatgattgttacgtcagatccaga
actgctgggcagccaacaacgttgtga
DBGET
integrated database retrieval system
