Caretta caretta (Loggerhead turtle): 125636001
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Entry
125636001 CDS
T09292
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125636001 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125636001 (PDS5A)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125636001 (PDS5A)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
125636001 (PDS5A)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
125636001 (PDS5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
125636001
NCBI-ProteinID:
XP_048704488
LinkDB
All DBs
Position
4:89508938..89685650
Genome browser
AA seq
1418 aa
AA seq
DB search
MLHLPELHERPVEDCGEGKFITSGTRMDFPATQPKPPADGKIIYYPPGVKEITDKITNDE
VVKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRI
YAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDC
NEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNL
NKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEHVFDLIQELFAIDPHLL
LSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVR
LESVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAGKRDLSLVNDQLL
GFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKVSWIKDKLLHIYYQNSID
DKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELL
DLHKQPTSEANSSAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPT
CSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIE
GTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQ
IFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEP
LSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGK
LWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRI
SKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKAL
VKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMANEKLLSLLPEY
VVPYMIHLLAHDPDFTKPQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAESIKLT
RDAQSPDEPKANEKLYTVCDVALCVINSKSALCNADSPKDPVLPTKFFTQPEKDFCNDRN
YITEETRVLLLTGKPKPTGVLGAVNKPLSATGRRPYIRSTGSETGSNISVNSELSSPAGN
RSREQSSDISETGVSENDENPVRIISVTPAKTEPVKNKEIHSDQATQGNISTERGKKRTA
AAAGSENIHQKTEEKKADESGPPAPPKPRRGRPPKSESQGTTVKNDETNKPSGRGRKRAA
VSQESSGGLEAGNAKAPKQQDIAKKAAPAQRQIDLQRSQVLGSDGDSLLEIDSSPGYSSN
DTDHFKACESSQEDNEDTELAEGGFLKVKRKLTRKGRK
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccttccggagctgcatgagaggccggtagaggactgtggagaaggaaagttt
ataaccagtggcaccaggatggactttcctgctacccaaccaaaacctcctgccgatggc
aagatcatctactatcctcccggagtaaaggagatcacagacaaaattactaacgatgag
gtggtcaaacggttgaagatggtagtaaaaaccttcatggacatggaccaggactcagaa
gatgagaaacagcagtatctccctttagccttgcatcttgcatcggaattcttcctcagg
aatcccaacaaagatgtgcgtctccttgtagcatgttgcttggctgatatattccgaatc
tatgctccagaagcgccatatacatcccatgataaacttaaggacatattcttgtttatt
acaagacagttaaaaggcttggaggacactaagagcccacaatttaaccgatacttttac
ttattagagaatttagcatgggttaaatcttacaacatctgctttgagttggaagattgc
aatgaaatttttattcagctttttaggactctcttttcagtcatcaacaatagccacaac
cagaaggtacaaatgcacatgctggatttgatgagttctatcatcatggagggtgatgga
gtaactcaagagcttctggactccattctcattaacctcattcctgcacacaagaacctt
aataaacaagcatttgatcttgcaaaagtgttgttgaaaaggactgtccagactattgaa
ccatgtatcgccaatttttttaaccaggttctggtactgggaaagtcttcagtaagtgac
ttgtcagaacatgtgtttgatctgatacaagagctttttgccatagatcctcacttattg
ctgtccgtcatgccacagcttgagttcaaactgaagagtaatgatggagaagagcgtttg
gctgttgttcgacttctagctaaactatttggctctaaagattctgatctggcaacacaa
aatcgtcctctttggcaatgctttcttggacgatttaatgatatccatgtccctgtgaga
ttagaaagtgtgaaatttgccagtcattgtttaatgaaccatccggatttagcaaaagac
ctcaccgagtacttgaaggttagatcacatgacccagaagaagcgattcgacatgatgtc
attgttacaattataactgctgggaagagagacctttctttagtcaatgaccagctactt
ggctttgtaagggaaagaacactagataaacggtggcgagtaagaaaagaagctatgatg
ggacttgcccagctatacaagaagtattgtcttcatgctgaggctggcaaagatgctgca
gagaaagtgagctggataaaggataaacttttgcacatatattatcagaatagcattgat
gacaagttactggtagagaaaatctttgctcagtatcttgtcccacacaatttggaaaca
gaagagagaatgaaatgcttgtactatttatatgctagcttggatccaaatgctgtcaaa
gcactgaatgagatgtggaagtgccagaatatgcttaggagtcatgtacgggaattactg
gacttgcataagcagcccacttcggaagcaaatagtagtgccatgtttggaaagctgatg
accatagcaaaaaaccttccagatcccggaaaagcacaagattttgtgaagaaattcaat
caggttcttggggatgatgagaaacttcgatctcagctcgagttgttaatcagccccaca
tgttcatgtaaacaggcagatgtctgtgtgcgggagatagcccggaagcttgcaaatcca
aagcagccaacaaatcctttcctggagatggtcaaatttcttttggaaagaattgcccca
gtgcacattgactcagaagccattagcgcactagtaaagctgatgaataaatcaatagag
gggacagctgatgatgaagaggaaggtgtaagtcctgatactgctattcgtgcaggactt
gaacttctcaaggttttgtctttcacacatcctacctcgttccactctgcagagacatat
gagtctctcctgcagtgcctcaggatggaagatgataaggtagctgaggcagctattcag
attttcagaaacacaggccacaaaatagaaacagacctgccgcagataagatcgacatta
attcctattttgcatcagaaagcaaagagaggtactcctcaccaagcaaaacaggctgtc
cattgtatacatgccatattctcaaataaagaagtgcaacttgcacagatctttgagcct
cttagtagaagtttgaatgctgatgttccagagcaacttataactccattagtttctttg
ggccatatttctatgttagctccagaccagtttgcttctccaatgaaatctgtggttgca
aatttcatcgtgaaagatctcctcatgaatgataggtcaacaggtgagaaaaatgggaaa
ttgtggtccccagatgaagaggtttccccagaagttctagcaaaggtgcaagcaattaaa
cttttggtacgctggctcttgggtatgaaaaacaaccagtctaaatctgcaaattcaaca
ctccggttattatcagctatgttggtcagtgaaggagatttaacagaacagaagagaatc
agtaaatcagatatgtctcgtctccgactggctgctggtagtgccataatgaagcttgct
caggaaccttgttaccatgaaataattaccccagagcagttccagctctgtgcacttgtc
attaatgatgagtgttatcaagtgaggcagatatttgctcagaagctgcacaaggcactt
gtgaagttactgctcccattggaatacatggcaatctttgccttgtgtgccaaagaccct
gtgaaagagagaagagcccatgccagacagtgtttgctcaaaaatatcagtatacgaaga
gagtatattaagcagaaccctatggctaatgaaaagctgttatctctgctgcctgaatat
gtggtaccgtatatgattcatttactggcacacgatccagatttcacaaaacctcaggat
gttgatcaacttcgtgatatcaaagagtgcctgtggttcatgcttgaagttttaatgaca
aagaatgagaacaacagccatgccttcatgaaaaagatggcagaaagcatcaagcttacc
cgggatgctcagtctcctgatgagcctaaggccaatgaaaaactctatacagtatgtgat
gtagcactgtgtgtaatcaacagcaagagtgctttatgtaatgcagattcaccaaaggac
cctgtattgcccaccaaattttttacgcaacctgaaaaggacttctgtaatgacaggaat
tatattacagaagagacaagggttcttcttttaacaggaaagccaaaaccaactggtgta
ttaggtgcagtaaacaaaccattatctgcaactggaaggagaccttatattagaagcaca
ggatcagagactggaagcaatattagtgtaaactcagagttgagctctcctgcaggaaac
agatcaagggaacagagttcagatatatcagaaactggggtcagcgaaaatgatgaaaat
ccagtgaggattatttcagtcacgccagcaaagacagaacctgtgaaaaacaaggagatt
cattctgatcaggctacacaaggaaacattagcactgaacgtggaaaaaaaagaacggca
gcagcagctggatcagaaaacattcatcaaaaaacagaagaaaaaaaagcagatgaatca
ggaccaccagcccctcccaaacctaggagagggcgtccaccaaagtctgaatctcagggc
accacagtaaaaaatgatgaaacaaataaaccatctggcaggggaaggaaaagggcagca
gtcagtcaagagagttcagggggtttagaggcaggtaatgccaaagcaccaaaacagcaa
gacatagcaaaaaaagcagcaccagcacagagacaaattgatctacaaagaagccaggtg
ctgggaagtgatggagattcactgttggagatagactcaagtccaggatattcatcaaat
gatacggatcattttaaagcctgtgagagcagccaggaagacaatgaggatacagagcta
gcagagggaggcttcctaaaggtaaaaagaaagcttacacgaaaagggaggaaatga
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