Caretta caretta (Loggerhead turtle): 125636077
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Entry
125636077 CDS
T09292
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125636077 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125636077 (HERC3)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125636077 (HERC3)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
HECT type E3
125636077 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
125636077
NCBI-ProteinID:
XP_048704590
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All DBs
Position
4:17058238..17209535
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AA seq
1051 aa
AA seq
DB search
MLCWGCWSFGQPGIGSNLQAIIPEPQVYGFIHDRNIKEVACGGNHSVFLLENGEVYTCGL
NTKGQLGHQSEGSKPEQIGALADQHIVHVACGESHSVALSDQGQLFAWGAGSDGQLGITT
TEDSVAVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNNYGQLGLGKECPSQTS
PQRVTSLDGIPLAQVAAGGAHSFALSLSGAVFGWGRNNSGQLGLSDEQDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGTEVSQIA
CGRQHTLALVPSSGLIYAFGCGTKGQLGTGHICNVKCPSPVKGHWVAHNGQLSGRADAFK
YHIVKHIFCGGDRTFVLCSKSENSLPADDFRTINQLCYTCLINDETIAVWKQKLLERNNS
NSVNSEVVQILSSSACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILL
DQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPLFQDSKHYITLTLPLAMAILRLDTN
PSKVLDNWWSQVCPRYFLRLVNLYKGAVVYLLNGRKTLLIPVLFSSYITAALRLLEKLHK
VNLKVKHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDA
QAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVIHVRRSNLVGDALREL
SIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFICYPESNLLWFSD
TCFVEHNWFHLIGIVCGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQ
QLLDYPGDDVEETFCLNFTICRESYGVTEQKKLIPEGDKITVQKDNRQEFVEAYLNYIFN
LSVHEWYIAFSTGFLKVCGGKVLELFQPSELRAMIVGNSNYNWEEMEECAIYKGDYSATH
PTVRMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTSSGDQYLPVAHTCY
NLLDLPKYSSKETLSMRLTQAIDHYEGFSLA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatgttggtcttttggccagcctgggataggtagcaatctccaagca
atcatccctgagccacaggtgtatgggttcattcacgaccgaaacatcaaggaggtggct
tgtggaggaaaccattctgttttcttactggagaatggagaagtttatacctgtggcttg
aacaccaaaggacagctaggccatcagagcgagggaagcaagccagagcaaattggagca
ttggcagatcagcacatagtccatgttgcctgcggagagtctcacagtgtggcactcagt
gaccagggccagctgtttgcctggggtgcaggtagtgatggacagctggggatcacgact
acagaagattctgtggcagtaccaaggttaataaagaaactgaaccaacagacgatactg
caggtttcctgtggcaattggcattgcctagctcttgcggcagacggacagttcttcacg
tggggacagaacaactatggccagctgggcctgggtaaagaatgcccctctcaaaccagc
ccgcagcgcgtcacatctctcgatgggatccccttggctcaggttgctgccggcggagct
cacagctttgctctgtctctctccggagctgtgtttggctgggggagaaacaactcagga
cagctgggcttaagtgatgagcaagaccgagaatccccttgccatgtgaagctcttacgg
actcagaaggtcgtctacatcagctgtggagaggaacatacagcagtcctgacaaagagt
ggaggcgtgttcacatttggtgcgggttcctgtgggcagcttggccacgattccatgaat
gatgaggttaacccccggagggttctggagctgatgggcaccgaagtgtcccagattgct
tgtggcagacagcacactctagcccttgtgccttcttcaggactgatctatgcattcggc
tgcggaacaaaaggccagctgggaactggacacatatgcaatgttaaatgcccatctcca
gtaaaaggtcactgggtggctcacaatgggcagctctcaggtagagctgatgcctttaaa
tatcacattgttaaacacatcttctgtggaggagaccggacatttgtactttgctccaaa
tctgagaattccttgcctgctgacgatttccggaccataaatcaattatgctacacttgt
ttaataaatgatgaaactatagccgtttggaaacaaaagctgttagaacggaacaactct
aattcggtcaacagtgaagttgtgcagatcttgtcgtcgtctgcctgttggaatggaagc
ttcctggagaagaaaatcgatgaacattttaaaaccagccccaaaatccctggaattgac
ctgaattccaccagagtgctgtttgagaagctaatgaactctcagcattccatcctgcta
gaccagatcttaaagagctttgaaagctttttgattccccagctgtccagctccccacca
gacgttgaggcaatgagaatctacctgattctccctgaattccccctgtttcaagactcg
aagcattatataacgttaacacttcctctcgcgatggccattctgcgactggataccaac
cccagcaaagtattagataactggtggtctcaagtatgcccaagatatttcctgaggtta
gtgaacctctataaaggcgcagtagtttatctcctgaatggaagaaaaacattattgatc
cctgtcctgttcagtagttacattacagctgctctcaggctgctagagaaacttcacaag
gtgaatctgaaagttaaacatgtggaatatgacacattttatatcccagagatttccaat
ttggtggacattcaagaagactatcttatgtggttcttgcatcaagcaggaatgaaagta
aggccatctatcatgcaggatgctgtgacactctgttcttatcctttcatcttcgatgct
caagccaagaccaaaatgttacagacagatgctgaactgcagatgcaggtggcgatcaat
ggggcgaatttgcaaaatgttttcatgcttctcactctggagcctctgctggccagaagc
cctttcctagttattcacgtccgcaggagcaacttggttggtgatgctttgagggagctg
agcattcattcagatatcgatttgaaaaagcctctgaaagtgatctttgatggcgaggag
gctgttgatgctggaggggtcacgaaggaattctttctcttgttgctaaaggaactcctg
aatcccatctatggaatgttcatctgctatccagaatcgaacctgttgtggttttcagac
acgtgttttgtagagcacaactggtttcacttgatcggcatagtgtgtggacttgctata
tacaacttcactgtggtggacctccatttcccgttggcgctgtacaaaaaactattgaat
gtgaagccctgcttagaagacttaaaggagctgtcccctacagaaggaaggagtcttcag
cagcttttagattatcctggggatgatgtagaagaaacgttctgcctgaactttacaata
tgtagagaaagctatggcgtgacagagcagaagaagctaataccagaaggagacaaaatt
actgtgcagaaggacaataggcaggaatttgttgaggcctacttgaattacatcttcaat
ctctccgtccatgagtggtatatcgctttctccaccggcttcctgaaggtgtgcggtggg
aaggtcctggaactcttccagccctcagagctgagggccatgatagtaggaaacagcaac
tacaactgggaggaaatggaagagtgtgccatctacaagggggactactccgctacacac
ccgacagtgagaatgttctgggaaacctttcatgaatttcccttggaaaagaagaagaaa
tttcttttgttcctgaccggcagcgaccgcattcctatctatggcatgtcaagtttacgc
atcatcatccagtccacgtcgagcggggaccagtacctgcccgtagctcacacctgctat
aacctcctcgacctgcccaagtacagcagcaaggagaccctgagcatgcggcttacacaa
gccatcgatcactatgagggctttagcttggcctga
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integrated database retrieval system
