Caretta caretta (Loggerhead turtle): 125636148
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Entry
125636148 CDS
T09292
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
ccay04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125636148 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125636148 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125636148 (CFTR)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
125636148 (CFTR)
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
125636148 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
SMC_N
AAA_29
AAA_21
T2SSE
AAA_16
AAA_30
DUF87
RsgA_GTPase
NTPase_1
nSTAND3
Intein_splicing
MeaB
Motif
Other DBs
NCBI-GeneID:
125636148
NCBI-ProteinID:
XP_048704825
LinkDB
All DBs
Position
1:299638388..299783389
Genome browser
AA seq
1486 aa
AA seq
DB search
MQQSPLEKANIFSKLFFRWTKPILKKGYRQRLELSDIYQIPSADSADNLSEKLERQWDRE
LATSKKKPKLINALRRCFFWKFMFYGILLYLGEVTKSVQPLLLGRIIASYDPSNSHERSI
AYYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQIRIAMFSLIYKKTLKLSSRVLDKISTGQ
LISLLSNNLNKFDEGLALAHFVWIGPLQVVLLMGLLVEMLGPTAFCGLFFVIIMALFQAG
LGRMMMKYRDRRAGKTNERLVITSEIIENIQSVKAYCWEDAMEKMIEGLRETELKLTRKA
AYVRYFNSSAFFFSGFFVVFLCVLPLALTHGIIVRKIFTTISFCIVLRMTVTRQFPGAVQ
TWYDSLGAINKIQDFLQKEEYKTLEYNLTTTGVELEKVTAFWDEGIGEIFVKAKQESRKV
SSNDNNLLFSNFPLYGTPVLKDINFKIEKGELLTVSGSTGAGKTSLLMLIMGELEPSEGK
IKHSGRISFSPQVSWIMPGTIKENIIFGVSYDEYRYKSVIKACQLEEEISKFPEKDCTVL
GEGGIILSGGQRARISLARAVYKDADLYLLDSPFGYLDILTEKEIFESCVCKLMANKTRI
LVTSKLEHLRKADKILILHEGTSYFYGTFSELQDQRPDFSSKLMGFDSFDQFSPERRNSI
LNEALRRFSIDGDGVGSRNESKKQSFKQTTDFNEKRKNSIIINPLNISRKFSLIQKAPGQ
ANGIEGYSEPPERRLSLVPDSEQGDVILPRSNLLTTGPMFQGQRRQSVLNLMTRTSINQG
QSFYKKGSISVRNMSMVPPSNLSLKRDIYARHLSKDGVLEISDEINEEDLKECFIDDAAS
MSVVTTWNTYYRYITTHKSLTFVLILCVVIFLIEVAASLVGVWLLRGYAASVANATEAKN
ASSDVSNSAAVIVTDTSSYYVFYIYVGVADTLFALGIFRGLPLVHTLITVSKTLHQKMLH
AVLQAPMSVVNSLKAGGILNRFSKDTAILDDVLPLTIFDFIQLILIVTGAIIVVSILMPY
IFLASVPVIGAFIMLRTYFLRTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYF
ETLFHKALNLHTVNWFLYLSTLRWFQMRIELIFVLFFIAVAFISIATSGEGQSKAAIILT
LAMNIMSTLQWAVNSSIDVDSLMRSVSRIFKFIDMPKEETKNTKPLKDDQLTGVLIIENK
HAKDEKPWPSGGQMTVKNLTAKYIDGGAAVLENISFSISPGQRVGLLGRTGSGKSTLLFA
FLRLLNTEGDMQIDGISWNTITAQQWRKAFGVIPQKVFIFSGSFRKNLDPYGQWSDEELW
KVADEVGLKSVIEHFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHL
DPVTFQVIRKTLKHAFANCTVILSEHRLEAMLECQQFLVIEENKVRQYESIQKLLNEKNS
FRQAISYSDRLKIFPLHRRNSSKRKSRPKISALQEETEEEVQETRL
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtccccgctggagaaggccaacatcttctccaaacttttcttcagatggaca
aaaccaattttgaagaagggttacagacaacgtctggaactgtcagacatatatcaaatc
ccttctgcggattctgcagataatctttctgaaaaattggaaagacaatgggacagggag
ctggcgacttcaaagaaaaaacctaaacttattaacgctcttcgacggtgctttttctgg
aaatttatgttttatggaatattgttatatttaggggaagtcaccaaatctgtgcaacct
cttttactgggaagaataatagcctcctatgatcctagcaactcccatgagcgatccata
gcttactatctgggcataggcttgtgccttctcttcattgtgaggacactgcttctgcac
cctgctatatttggccttcatcatataggaatgcaaataagaatagccatgtttagttta
atttacaaaaagaccttaaaactgtcaagcagagtcctagataaaataagcactggacaa
ctcattagtctcctttccaacaatctgaacaaatttgacgaggggctagcattggctcat
tttgtatggattggacctttacaagtggtgctactgatgggactgctggtggagatgtta
gggcccacagcattttgtggacttttctttgtgataatcatggcccttttccaagctggg
ttaggacgaatgatgatgaagtacagagacaggagggcaggaaagacaaatgagagactt
gtgatcacctcagaaataattgagaatatacagtcagttaaagcttattgttgggaagat
gcaatggaaaaaatgattgaaggccttcgagaaactgaactgaaactgacccgaaaagct
gcatatgtgagatatttcaacagttcagccttcttcttctcaggtttttttgtggtgttt
ttgtgtgtgcttccccttgcactgacgcatggaattatcgtccgaaaaatatttaccacc
atctcattctgcattgttcttcgaatgacagtcactaggcagttccccggggctgtgcag
acatggtatgactctcttggagcaatcaacaaaatacaggatttcttgcaaaaagaagaa
tataaaactctggagtataatttaacaacaactggtgttgagctggaaaaagtaacagcc
ttctgggatgagggaattggggagatatttgtaaaagcaaagcaggagagcagaaaagtt
tccagcaatgataataatctcctctttagtaactttccactttatggcactcctgttctt
aaagatatcaactttaaaattgagaaaggagagctgttaactgtttctggatctactggt
gcaggcaagacttctctcttgatgttgataatgggagagttggagccttcagaaggtaaa
atcaagcacagtggaaggatttccttttctccacaagtctcctggatcatgcctggaaca
atcaaagaaaacatcatctttggtgtgtcctatgatgaatacagatataagagtgtcatc
aaggcctgtcagctagaagaggagatttcaaagtttcctgagaaagactgcacagtattg
ggggaaggtggaatcatcctgagtggaggtcaacgggcaagaatctcactagcgagagca
gtgtacaaagatgctgatttgtatctcctggattctccttttggctatttagatatttta
acagaaaaagaaatatttgaaagctgtgtttgcaagttgatggcaaataaaactagaatc
ctggtgacttcaaaacttgaacatttaaggaaagcagacaaaatattaattttacatgaa
gggaccagctatttctatggaacattttctgaacttcaggatcagcgccctgacttcagc
tcaaagctgatgggatttgattcttttgatcagttcagtccagagagaagaaactcaatt
ctgaatgaagctctccgacggttttccattgatggagatggagtgggttcccgaaatgaa
tccaagaaacagtcttttaaacaaactaccgatttcaatgaaaaaagaaagaactccatc
attattaatccacttaatattagcagaaagttttcattaatacagaaagccccaggacag
gccaatgggatagaaggttatagtgagccaccagaaagaaggctgtctctggtgcccgat
tctgaacagggggacgtcattctgcctcggagcaatttactaaccacagggcccatgttc
caaggacagaggaggcagtctgtgctgaacttgatgacccgcacctcaattaaccaggga
cagagcttttacaaaaagggaagcatatctgtacgtaatatgtcaatggtccccccgtct
aacctgtctctcaagagagacatctatgctaggcatttgtctaaagacggtgtcttggaa
ataagtgatgagattaatgaagaagatttgaaggaatgttttattgatgatgcagcaagc
atgagtgttgttactacctggaatacatattacagatacattaccacccacaaaagcttg
acttttgtgctaattttgtgtgtagtaatctttttaattgaggtggctgcttctttggtt
ggggtgtggcttctcagaggatatgctgcaagtgtggcaaatgcaacagaggcaaaaaat
gccagctctgatgtgtccaacagtgctgcagtgattgtcaccgacactagcagctactat
gtcttctatatttacgtgggagtggcagataccctgtttgccttgggaatcttcagaggt
ttacccctggtgcatactcttataacagtttctaaaactcttcatcagaagatgctgcac
gcagttcttcaggcaccgatgtcagtcgtcaactctttgaaagcaggtggaatacttaac
agattctctaaagacacagccatactggatgacgtactgccacttacaatatttgacttc
attcagttaatactgattgtgactggcgccataatagtagtctcaattttaatgccctac
atattcctggcatcagtgcctgtgataggagcctttattatgttaaggacatattttctc
cgcacttctcagcagctgaaacaactggaatctgaagcccggagtccaattttcacacat
cttgttacaagcttaaagggactatggacactaagagcttttgggcgacagccatatttt
gaaaccttatttcacaaagcgctgaacttacacacagtgaactggttcctgtacctgtcc
acactgcgctggttccagatgagaatagaacttatttttgtcctcttcttcattgctgtg
gcattcatctctattgcgacttcaggtgaagggcaaagcaaagctgccattattctaact
ttagccatgaatatcatgagcaccttacaatgggcagtaaactcaagcatagacgtggac
agtctgatgcggtctgtaagccgaatatttaaattcattgacatgccaaaagaagaaaca
aaaaacactaagccactaaaggatgaccagcttacaggggtcctcataattgaaaacaag
catgcaaaggatgagaagccctggccatccggaggccaaatgactgtcaagaatctcaca
gccaagtatattgatggaggagctgctgtattagaaaacatttccttttcaataagtcct
ggacagagggtaggtcttttgggaagaactgggtcggggaaaagcactttgctctttgcc
tttttaaggctgctgaatacagaaggagatatgcaaattgacggcatctcttggaacaca
atcactgcgcagcagtggagaaaggcatttggagttataccacagaaagtgttcatattt
tctgggtcttttcggaaaaacttggatccttatggacaatggagtgatgaagaattatgg
aaagtagcagatgaggttggactgaagtctgtaatagagcattttccaggccagcttgat
tttgttcttgtagatggtggctgtgtcctcagccatgggcacaaacaattgatgtgtctc
gccagatcagttctcagtaaagctaaaatcctgcttcttgatgaaccaagtgctcatctt
gatcctgtaaccttccaggtgattagaaaaacactcaagcatgcatttgcaaactgtaca
gtaatactctcagaacacagactagaagcaatgttggaatgtcagcaatttttggtaata
gaagagaataaagtgcggcaatacgagtcaatccagaagctgctgaatgaaaagaattcc
ttcaggcaggctatcagctactctgatcgccttaagatattcccactacaccgcaggaat
tcaagcaagcgcaagtctagacccaaaatcagtgccttgcaggaagagacagaggaagaa
gtgcaagagaccaggctgtga
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integrated database retrieval system
