Caretta caretta (Loggerhead turtle): 125636159
Help
Entry
125636159 CDS
T09292
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125636159 (WDR1)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125636159 (WDR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
eIF2A
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
NBCH_WD40
PEP5_VPS11_N
Beta-prop_RIG_1st
PROPPIN
WD40_like
Beta-prop_ELP1_1st
WDR54
RMC1_N
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_DCAF12
BBS2_Mid
PQQ
Motif
Other DBs
NCBI-GeneID:
125636159
NCBI-ProteinID:
XP_048704802
LinkDB
All DBs
Position
4:107404697..107431254
Genome browser
AA seq
607 aa
AA seq
DB search
MPFESKKVFASLPQVERGVSKIIGGDPKGNNFLYTNGKCVVIRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRLAAV
GEGREKFGAVFLWDTGSSVGEISGHNKVINSVDIKQTRPYRIVTGSDDNCGAFFEGPPFK
FKFTISDHSRFVNCVRFSPDGNRFATSSADGQIFVYDGKTGERVCALGGNKAHDGGIYAI
SWSPDSSHLLSASGDKTAKIWDVGANSLVSTFNMGSDVLDQQLGCLWQKDHLLSLSLSGY
INYLDKNNPNKPLRVIKGHSKSVQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDDFS
GKGHTNQVSRMAVDELDQLVSCSMDDTVRYTSLTKRDYSGQDVVKMDVQPKCLAVGPGGY
TVVICIGQIILMKNKKKCFAVDDPGYEPEVVAIHPGGGTAAVGGLDGNVHLYSIQGTSLK
IDEKTLQAKGPVTDLAYSHDGAFLAVCDANKVVTVFSVADGYAEHNIFYGHHAKIVCLAW
SPDNEHFASGGMDMMVYVWTLSDPETRVKIPDAHRLHHVSSLAWLDEHTLVTTSHDASVK
EWSISYK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgagagcaaaaaagtgtttgccagcctcccccaggttgaaagaggtgtctcc
aaaattattggaggggatcccaagggcaacaactttctgtataccaatggaaaatgcgtc
gtcatcagaaacattgacaatccagcaattgctgatatctatactgagcatgcccatcaa
gttgtggttgccaagtatgctcccagtggattctacatagcttctggagatgtctctgga
aagcttagaatttgggataccacccagaaggaacacctactgaagtatgaatatcagcca
tttgcaggaaaaataaaagatattgcctggactgaagacagcaagaggcttgccgctgtg
ggggaaggcagggagaaatttggagcagtgttcctatgggatactggctcttcagtcgga
gagatctctggacacaacaaggtgatcaacagcgtggatataaaacaaacaaggccctat
cgtatagtaactggcagtgatgacaattgtggtgctttctttgagggaccgccattcaaa
ttcaagtttacaataagcgaccacagccgttttgttaactgtgtgaggttctctcctgat
gggaacagatttgctacatctagtgcagatggccagatttttgtctatgatgggaagact
ggagagagagtttgtgctctgggtggaaataaggctcatgatggaggcatttatgctatt
agctggagccctgatagcagtcacttgctttctgcttctggagacaaaactgctaaaatc
tgggatgttggtgctaactctcttgtcagtacgtttaacatgggatcagatgttctggat
cagcagttgggttgcttgtggcagaaggaccacttactgagcctctccctctctggttac
attaactatttggataagaataacccaaataagcctctacgtgtcataaagggtcatagt
aaatcagttcagtgtctgaccgtgcataaaaatggtggaaaatcctatatttactctgga
agtcatgatggacacattaattattgggattccgaaactggggagaatgatgacttttct
ggaaaaggacatacaaaccaggtttctagaatggctgtggatgaattggatcagctggtc
agttgcagtatggatgacactgtgcgttatactagcctaaccaagagagactacagtggc
caggatgttgtaaaaatggatgtccaaccaaaatgtttagctgttggtcctggtggatat
acagtagttatatgcattggacaaatcatcttgatgaagaataagaagaaatgttttgca
gttgatgaccctggctatgaaccagaagtggtggccattcacccaggaggtggtaccgct
gcagtgggaggcctggatgggaatgtccatctatattcaatccaaggaacctctctgaaa
atcgatgagaagaccttgcaagctaaaggtcctgtgactgacctggcatattctcacgat
ggtgcctttcttgcagtttgtgatgcaaacaaagttgtcactgtctttagtgttgctgat
ggctatgcggaacataacatcttctatggacaccatgcaaaaattgtttgccttgcctgg
tctccagacaatgagcattttgcctctgggggcatggacatgatggtttatgtttggacc
ttaagtgacccagagaccagagtcaagataccagacgctcatagactacatcatgtaagc
agcttggcatggctggatgaacataccctggtaacaacatcccatgatgcttctgtcaaa
gaatggtctatctcctacaagtga
DBGET
integrated database retrieval system
