Caretta caretta (Loggerhead turtle): 125636289
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Entry
125636289 CDS
T09292
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00310
Lysine degradation
ccay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125636289 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125636289 (SMYD1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125636289 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
125636289 (SMYD1)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125636289 (SMYD1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
PilJ_Pilin
CpXC
FRG1
Motif
Other DBs
NCBI-GeneID:
125636289
NCBI-ProteinID:
XP_048705165
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Position
4:121140790..121188530
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AA seq
491 aa
AA seq
DB search
MTPREMEMVEVFTSEGKGRGLKAAKEFWAGDVIFAEPAYAAVVFDSLTHLVCHTCFKRQE
KLHRCGQCKFAHYCDRTCQRDAWLNHKHECSAIKAHGKAPNENIRLAARIMWRIEREGGG
LTEGCLVSIDDLQNHVENFGEEEKKELRADVESFLNFWPPQSQQFGMQYISHIFGVINCN
GFTLSDQRGLQAVGVGVFPNLCLVNHDCWPNCTVIFNNGNHEAVRSMFHTQMRIELRALG
KVSPGEELTVSYVDFLNVSEERRQQLQKQYYFRCTCEHCQKGIKDDLMLAVKEGENKPSQ
DVVKEVLQFSKDTLEKISKARSEGVYHEVVKLCRECLKKQEPVLGDTNIYLLRILSIASE
VLSYLQMFEEAAGYAKRMVDGYMKIYHPNNAQLGMAVMRAGVTHWHASLIEAGHGMICKA
YAILLVTHGPTHPITKDLEVMRVQSEMELRMFQQNEFMYYKMREAALKNQKIQVMPEPTN
EASSGLFHTKQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacacctagggagatggagatggtggaagtgttcacttcggaaggcaaaggcaggggg
ttgaaggcagccaaggaattctgggctggagatgtcatctttgcggagccagcctacgcc
gcagtagtttttgacagccttactcacctggtctgccacacctgctttaaaaggcaggag
aagctccaccgctgtggtcagtgtaagtttgcccactactgtgatcgaacctgccagagg
gatgcgtggctgaaccacaaacatgagtgctctgccatcaaggcgcatgggaaagcgccc
aatgaaaacatcaggctggcagcccgcatcatgtggaggatagagagagagggaggtggc
cttacggagggctgcttggtctccatcgacgacttgcaaaaccatgtggagaactttgga
gaagaggagaagaaagagctgagggccgacgtggagagtttcctcaacttctggccccca
cagagtcagcagtttggcatgcagtacatctctcatatattcggagtgataaactgcaat
ggcttcaccctgagtgaccaaaggggactgcaggctgttggcgtgggcgtcttccccaat
ctctgcctggtgaaccatgactgctggcctaattgcactgtcatattcaacaacggcaat
catgaggctgtaagatcaatgttccacacacagatgagaatcgagctgcgtgcgctgggc
aaagtctcaccgggggaagagctgactgtctcctatgttgatttcctcaacgtcagcgaa
gagcggaggcagcagctccagaagcagtactattttcgctgcacgtgtgagcactgccag
aaagggatcaaagatgatctgatgctggctgtaaaagaaggtgaaaacaagccctcccaa
gatgtagtgaaggaagttctccagttctccaaggacaccctggagaagatcagcaaggcc
cgatccgagggggtctaccacgaagttgtgaagctctgtcgtgagtgtctgaagaaacaa
gagcctgtgctgggagacactaacatctacctgctcaggatcctgagcatcgcttcggaa
gtgctctcctacctccagatgttcgaggaagcagcaggctatgcgaagaggatggttgat
ggttacatgaaaatataccatcccaacaatgcgcagttagggatggcagtgatgcgggca
ggagtgacccattggcatgccagtctcattgaagcagggcatggcatgatctgcaaagcc
tatgctattcttctggtgacccatggacctacccacccaatcaccaaagacctggaggtc
atgcgtgtccagtcggagatggagctgcgcatgttccaacagaacgagttcatgtattac
aaaatgagagaagcagccctgaaaaaccagaagatccaagttatgcctgagcccaccaat
gaagcttcatcgggcctcttccacacgaaacagtaa
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