Caretta caretta (Loggerhead turtle): 125636495
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Entry
125636495 CDS
T09292
Symbol
THBS4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04145
Phagosome
ccay04510
Focal adhesion
ccay04512
ECM-receptor interaction
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125636495 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125636495 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125636495 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125636495 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125636495 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125636495 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
ccay00536
]
125636495 (THBS4)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Phagocytosis
Opsonins
125636495 (THBS4)
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125636495 (THBS4)
Exosomal proteins of colorectal cancer cells
125636495 (THBS4)
Exosomal proteins of bladder cancer cells
125636495 (THBS4)
Glycosaminoglycan binding proteins [BR:
ccay00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125636495 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
EGF_CA
cEGF
EGF
DUF7630
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125636495
NCBI-ProteinID:
XP_048705609
LinkDB
All DBs
Position
5:complement(43037446..43093983)
Genome browser
AA seq
952 aa
AA seq
DB search
MMSKRQVTVLLLQVLLQFSPGSGAQPAPQVFDLLSSPSQRLVNFLQQVLADPTLNEVYVL
STFKLQTKSTATVFGLYSSDDNSKYFEFTVVGRLNKVILRYVKNDGKLNSVMFSNTQLAD
GKRHTVLLRLSGLQRGSITAELYLDCVQVDAIQGLPKAFSGLYHSSESVEIRTLAKKAQD
TLDELKLVVKGSLSQVASLQDCFLQQIEPAAQDTDDFNRQFMGHMMQMNQILGDVKDLLR
QQIKETTFLRNTIAECQACGLGATNFPTLPPLPPKPKCEANSCSRGVRCTETADGFQCGP
CPEGFTGNGVTCSDIDECRYSPCFPGVRCVNIVPGFRCEACPPGYTGQTVLGVGINTAKN
NKQVCLDIDECNNGQNGGCIPNSHCINTMGSYHCGPCKPGYTGDQVKGCKAKSSCRNRAL
NPCSVHAQCTEQRQGEISCTCGIGWAGDGYICGKDIDIDGYPDEKLSCSADSCRKDNCRF
VPNSGQEDADGDGLGDACDEDADGDGIPNEQDNCVLVPNIKQRNSDQDIFGDACDNCRTV
LNNDQRDTDGDGKGDACDDDMDGDGIKNLLDNCQRVPNRDQKDGDNDGVGDACDSCPTIS
NPNQSDIDNDLIGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGLGDECDDDDDN
DGIPDLMPPGPDNCRLVPNPGQEDDNSDGVGDICESDFDQDTVIDRIDICPENAEITLTD
FRAYQTVVLDPEGDAQIDPNWMVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHL
RNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFYEGSQLVADSG
VTVDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQLRGGDI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaagcggcaagtcaccgtcctgctcttgcaagttctcctgcagtttagcccg
ggctctggcgcccagcctgccccgcaagtttttgatcttctttcatctcccagccagagg
ctggtaaactttctacagcaagtgcttgctgatcctacattgaatgaagtatatgtgctc
tcaacattcaaattgcagacaaagagtacagccaccgtatttggcttgtattcttcagat
gacaacagcaagtattttgaatttacagtggtggggcgattgaataaagtcatcctgcgt
tacgtgaagaatgatgggaagttaaactctgtgatgttcagcaacacccagctggctgat
gggaagcgccatacagtccttttgaggctgagtggtctgcagcggggatccatcacagca
gagttatatctggactgcgtgcaggtggatgccattcaaggtctacctaaagctttttca
ggtctataccacagctcagagtctgtggaaattcgcaccctagctaaaaaggcacaggac
actttggatgagctgaagctggtagtgaaaggctcactttcccaagtagcaagtctgcaa
gattgcttccttcagcagattgagcctgctgctcaggacacagatgattttaataggcaa
ttcatgggtcacatgatgcaaatgaaccaaatactaggagatgtgaaagaccttctcaga
cagcagatcaaggaaacaacttttttgagaaatactatagcagaatgccaggcatgtggt
ttgggagctacaaactttccaactctgcccccactgccccctaaacccaaatgcgaagcc
aactcctgttccaggggggtcaggtgcacagagacagcagatggatttcagtgtgggccc
tgtcccgaagggttcacaggaaatggagttacatgctcagatattgatgagtgccgctat
agcccgtgcttccctggggtacgctgtgtgaacattgttccaggcttcagatgtgaggct
tgccccccaggatacacaggacagacagttctgggggtggggatcaatactgccaagaac
aataagcaggtctgcttggatattgatgaatgtaataatggccaaaatggagggtgcatt
ccaaattcccactgcataaacaccatgggttcttaccactgtggcccatgcaaacccggt
tatactggagaccaggtcaaaggatgcaaggctaagagcagctgcagaaatcgagccttg
aacccatgcagtgtccatgcacagtgtactgaacagaggcaaggagagatttcatgtacc
tgtggcattggttgggctggtgatggttatatctgtggaaaggacatagatattgatggc
tatcctgatgaaaaactctcatgctctgctgatagctgcagaaaggacaactgcagattt
gttccaaactcaggacaagaagatgcagatggtgatggactcggagatgcctgtgatgag
gatgcagatggagatggaattcctaatgaacaggataactgtgtattggtgccaaacatt
aagcagaggaacagtgatcaagatatttttggagatgcttgtgacaactgtcgcacagtc
ttgaataatgaccagagggacacagatggtgacgggaaaggagacgcctgtgatgatgac
atggatggagatggtattaagaatcttttggacaattgtcagagggttcccaatcgggac
caaaaggacggggataacgacggtgttggtgacgcttgtgacagctgccccactatcagc
aaccccaaccagtcagatattgacaatgacctgattggagattcttgtgacaccaaccaa
gacagtgacggagatggacaccaggacagcacagacaactgtcccacagtcattaacagc
tcccagctggacactgataaggatgggctgggtgacgagtgtgacgatgatgatgataat
gatgggattccagacctcatgcccccgggccctgataactgcagactggttcccaatcca
ggacaggaagatgacaacagtgatggagttggtgatatatgtgaatcggattttgaccag
gacacagtaattgatcgaattgatatttgccctgagaatgctgagatcaccctcacagat
ttcagggcttatcaaactgtggtcctggatcccgaaggtgatgctcagattgatcctaac
tggatggttctgaaccagggtatggagattgtacagaccatgaacagtgatcctggcctc
gcagttggctacacagctttcaatggggttgactttgaaggcacctttcatgtgaacacg
gtgacggatgatgactatgctggctttatttttggttaccaagacagttccagtttttat
gtggtaatgtggaagcagacagaacagacttactggcaagcaactccattcagagctgtt
gcagagcctggcattcagcttaaggctgttaaatccaagactggccctggcgaacacctc
aggaattcactctggcatactggggacaccaatgaccaagtcagactgctttggaaagac
cccagaaatgtaggttggaaagataaagtctcttatcgatggttcttgcagcacagaccc
caggttggatacatcagggcaagattttatgaaggttctcaactggtggcagattctgga
gtaactgtagacactaccatgcgtggaggaagacttggtgttttctgcttctctcaggaa
aacattatttggtccaacctgaaatatcgctgcaatgacaccatccccgaggactttcag
gaatttcaagctcagcagcttcgaggtggagatatttaa
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