Caretta caretta (Loggerhead turtle): 125636507
Help
Entry
125636507 CDS
T09292
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125636507 (ELP1)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
125636507 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
TPR_IF140-IFT172
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
125636507
NCBI-ProteinID:
XP_048705636
LinkDB
All DBs
Position
5:127969533..128087336
Genome browser
AA seq
1358 aa
AA seq
DB search
MRLPEAPVAAPRWQRPSPERRRGRARSCVADTMRNLKLLYAREHGPVPALGSPQCFCLRA
DQGTLLIGSEYGILELDPAIRGVTNEISLTVDGFLPEDGSGHIVGIEDLPDQECVCVATA
AGDVILCNLSTKQLECVGSVDTGLTTMSWSPDQELVLLVTGQQTLIMMTKDFEPITEREI
HQDDFGEGKFITVGWGKKETQFHGSEGKQAAHRKQTEVPPASSSDDGRPRVTWRGDGQFV
AVSAICPQTGARKVRVWSRELVLQSTSEPIPGLEQALAWKPSGSLIASTQEKPNKHDVVF
FEKNGLLHGEFTLPFQKGQAKVNELLWNLDSTILAVWLEDLKKEKNSGTNTYVQLWTVGN
YHWYLKQSLRFGSAEKSQLVSLRWDPEIPRRLHALCRGWHALCYDWHWSTDRSTGEESRR
VASVAVIDGDKVLVTAFQHSVLPPPMCTFQLQLQQAVNQVAFHTDPAKSADLAVLDASNR
ISIYRVGDGTVKDPTVTLGGSGFKASVETPHLEKTYRVEVCGGSKQVNPLAFRLFTWLQD
DTFLAVSQGQLATHSVIHHLTGGPEAEGGCLHLRLSVPVDGDVISLCYNPKTSAVALQLA
DGRILKYLCEAPTPALEPWTSLSGSAVRFPSPCVQTALAVIGGEEAILGLTERCRFFIND
VEVASNITSFAIYDEFLLVTTHSHTCQCVSLRDTSLKVLQAGFSSSSTPNETLRKVERGS
RIVTVVPQDTKLILQMPRGNLETVHHRALVLAQIRKWLDRLMFKEAFECMRKLRINLNLL
YDHNPKVFLENVETFIKQIDSVNYINLFFTELKEEDFTKTMYPSPVSSNVQLQQCPDQKK
VDLICDAMRAAMENINPQKYYLSILTSHVKKSTPELEIALQKVHELRETVSPAAEGVTAE
AALKYLLFLVDVNELYDHSLGTYDFDLVVMVAEKSQKDPKEYLPFLNTLRKMETNYQHYT
IDKYLKRYKKALCHLSKCGPEHFSEFLNLVKDQKLYNEALKLYPPDTPEHKAVGSAFGEH
LNQKHLYEQAGLIFARCGAFERALDAFLSSGSWQLALCMASRLGYTADQLAGLARSLAGK
LVEQKKHAEAAILLEQYAQDYEEAVLLLLEGTIWEEALRLIHKYGRLDILETNFKPAILE
AQRNYLVFLESQKTTFTRHRKRLLVVRELKEQARQGLLDDETPNCLEADLISETSSIVTA
SDMSGKYSHSNSRISARSSKNRRKAERKQHSLKEGSPLEDLALLEALGENIRTTENMKGE
VHSLLKGLVLFGYDELARELQQALEEALQLIERSLPEIWTTDLQQNPANPVLGPNSTANS
IMAAYQQQRIAAPAVQDAELLIPPKLNKNIQWKLNLLQ
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccggaagcgccggtcgcggctccaagatggcagcgcccgtctcctgagcgg
cggcgcgggcgcgcgcgttcctgtgttgctgatacgatgagaaatttgaagttactgtac
gctcgagagcatgggcctgtcccggctttggggagtcctcagtgtttctgcctccgtgca
gaccaagggacgctgctcattggctcagaatatgggatcctggagctggacccagccatt
cgaggggtgacgaatgaaatttccttgactgtggatggttttctgccagaagatggaagt
ggccacattgtgggcattgaagatctgccagatcaggagtgtgtgtgtgttgctacggca
gctggagatgttatactgtgcaacctcagtacaaagcagctcgaatgtgttgggagtgtg
gacactggtctgaccaccatgagctggagtcctgaccaggagcttgtcctgctggttaca
ggtcagcaaactcttattatgatgacaaaggactttgaaccaattactgaaagggagatc
caccaggatgactttggggaaggaaagttcatcactgttggttggggtaaaaaggagaca
cagttccatggatcagagggcaaacaggcagctcatcgcaagcaaacggaagtgccacct
gcttcatcctctgatgatggccgaccccgagtcacctggagaggagatgggcagtttgta
gcagtgagcgctatttgtccacagacaggagcccggaaggtcagagtgtggagcagggag
ctggtcttacagtcgacaagtgagcctatcccaggactagaacaagcactggcgtggaag
ccctctggaagcctgatagcatccacacaggagaaacccaacaaacatgatgttgtcttc
tttgagaaaaatggtctccttcatggggaattcaccctcccatttcagaaaggccaagcc
aaggttaacgagctgctttggaacttagactctaccatcctggcagtttggctggaagat
cttaagaaagaaaagaactccgggacaaacacctatgttcagctctggacagtggggaac
tatcactggtacctgaagcagagcctgcgttttggcagcgctgagaaaagccagctcgtg
tcactgcggtgggaccctgagatcccacgtcgactgcacgctctctgcagggggtggcac
gccctctgctacgactggcactggagcaccgaccgcagcactggggaggagagccgccgc
gtggccagcgtggccgttattgatggagataaggtgctagtaacggccttccagcattct
gtgctgcctccgcccatgtgcaccttccagctccagctccagcaggcggtgaaccaggtc
gcattccacacagaccccgcaaagagcgcagaccttgctgtcctcgacgccagcaacagg
atctccatttacagagttggtgacggcactgtgaaagaccccactgttacattgggagga
agtggatttaaagcttctgttgaaacacctcatctggaaaaaacctacagagttgaggtg
tgcggcggcagcaagcaggtgaacccactagcgttccggcttttcacttggctgcaggac
gacaccttcttggcagtcagccaggggcagcttgccacgcactccgtcatccaccatctg
acaggaggtcctgaggcagagggagggtgcctacatctccgtttgtctgtgcctgtggat
ggggatgtgatcagcctgtgctataatccgaagaccagcgcagtagctctgcagctagct
gatgggcggatactgaagtacctctgtgaggctcccactccagccctcgaaccttggacg
agcctcagtggctctgctgtgcgattcccttctccatgtgtgcagactgcactggccgtg
attggtggagaagaggccatcctgggtctgactgagcgatgccgttttttcattaatgat
gtggaggtggcttccaacattacctcatttgccatatatgatgagtttttgctggtgacc
acccactcccacacctgccagtgtgtatctttgagggacacatcactgaaagttctgcag
gcaggcttcagcagctcctctactcccaacgagacacttcgcaaggtggagcgaggctcc
cgcatagtcaccgttgtaccccaggacaccaagctcatcctgcagatgccaagaggaaac
ttggagactgttcaccaccgagccctcgttctggcccagattcggaagtggttggacagg
cttatgtttaaagaagcatttgaatgtatgaggaagctgagaatcaacctcaaccttctt
tatgatcacaatcccaaggtttttctggaaaatgtggaaaccttcataaaacaaatagat
tccgtgaattacatcaacttatttttcaccgagttgaaagaagaagacttcacaaagact
atgtacccatctccagttagcagcaacgtccagctacaacagtgtcctgatcagaaaaaa
gtagaccttatctgtgatgcaatgagagctgccatggaaaacatcaatcctcaaaaatac
tatctttcaatactgacatcccatgtgaagaaaagcaccccagaactggaaattgccctc
caaaaagtgcacgagctgcgagagactgtttcaccagcagctgagggggtgactgcagag
gcagcgctgaagtatctgctcttcctggttgacgtcaatgaactgtacgatcactccttg
ggcacatacgactttgatctggttgtcatggtggcagagaagtctcagaaggaccctaag
gagtacctgccattcttaaacaccctccggaaaatggaaaccaactatcaacactacact
atagacaaatatctgaaaaggtacaagaaggcactctgccacctcagcaaatgtggtcca
gagcacttctctgaatttctgaacttggtgaaggatcagaagttgtataacgaagccctg
aagttgtatccacctgatactccagaacacaaggctgtcggcagtgcctttggggagcac
ttgaaccagaagcatctgtatgagcaggctggactgatctttgcccgctgcggtgcattt
gagagagccctcgatgcctttctgagcagtggcagctggcagctggccctttgcatggcc
tctcggcttggttacacggcagatcagctggctggccttgcaaggagcctggcaggaaaa
ctagttgaacagaagaaacatgctgaggcagccatactcctggagcagtatgcacaggac
tatgaagaggctgtgctcctgctcttggaagggaccatctgggaagaagccttgagacta
attcacaaatacggcagactagacattctggagaccaacttcaaacctgctatcctagaa
gcccagagaaattatttggtgtttctggagtctcagaaaacaacgttcactcgccacaga
aagcgcctcctggtggttcgagagctgaaggagcaggcccgccaagggctactggatgat
gagacaccaaactgtctggaggcagaccttatttccgaaaccagcagcatcgtgacagcc
agtgacatgagtggcaaatactcgcatagtaactcgaggatatctgcccgatcctccaag
aaccgtcgcaaggcagagcgcaagcagcacagtctgaaagaaggaagccctctggaggat
ctggcccttctagaggccttgggagaaaacatccgcactactgagaacatgaagggtgaa
gtgcacagcttattaaaggggcttgtgctctttggctacgatgagctggccagggagctg
cagcaggccctggaagaggctttgcagttgatagagaggtcactcccggaaatctggacc
acagacctgcaacagaatcctgctaacccagtcctgggccccaattcaactgcaaatagc
attatggctgcctatcaacagcaaagaattgcagctcctgcagtacaagatgcagaactt
cttattcctccaaaactcaataaaaatatccagtggaaactgaatctcttacagtaa
DBGET
integrated database retrieval system
