Caretta caretta (Loggerhead turtle): 125636599
Help
Entry
125636599 CDS
T09292
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125636599 (RNF38)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125636599 (RNF38)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125636599 (RNF38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125636599
NCBI-ProteinID:
XP_048705942
LinkDB
All DBs
Position
5:119727781..119924152
Genome browser
AA seq
650 aa
AA seq
DB search
MPIAASSQPRAAQPDARLVPPARLRERDPAKPGAAGAEEPRATGRLDPPGQAGEAAPPAG
LIGRAAAPPAAPFLPSPPLPPAFQSPPPAPAAAASPPPAPFLLLEPPRTRSRSRSGFLTL
AMSGAAAHFQPPPPLHGPSLPEQGVRSQGRGSPAGHGHPRAAPAPGSTGASFQCQSIHQD
HICNDDSDKSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQPPSARPNQHHF
SGERCNTPARNRRSPPVRRQRARRDRLSRHNSISQDENYHHLPYGQQQAIEEPRAFHPPN
VSPRMLHPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACNTQQ
VPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPP
HLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLTPSAPLQFLT
HDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPA
FSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVV
CMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgccgccagctcgcagccccgcgcggcgcagcccgacgcccgcctcgtcccc
ccggcccggctgcgggagcgggaccccgccaagccgggggccgccggcgccgaggagccg
cgggccaccgggcgcctggatccccccggccaggccggcgaggcggccccgccagccggg
ctgatcggcagagcggcggctcctcccgccgcccccttcctcccctccccgccgctgccg
cccgccttccagtccccgccgccggcccccgccgccgccgcctccccgccgccggccccc
ttcctgctgctggagccgccccgcacccgctcccggtcccgctccggcttcctcaccctc
gccatgagcggggccgccgcgcacttccagccgccgccgcccctccacgggccgagcctc
ccggagcagggagtccgcagccagggcagaggcagccccgccggccacgggcacccacgg
gccgcccccgcgccaggtagtacgggtgcttccttccagtgccagtcaatccatcaagac
cacatttgtaatgatgacagtgacaagagtgaagacagtccgagtcctaagagacaacgc
ctttctcattcagtctttgactatacagcagcatcaccagccccatcaccgccaatgcga
ccatgggagatgacatcaaataggcagcctccttcagctcgacccaaccaacatcacttc
tcaggggaacgatgcaacacacctgcacgcaacaggaggagtcctcctgttagacgccag
agagcgagaagggatcgcctgtctcgacataattccattagtcaagacgaaaactatcac
catctcccctacggacagcaacaagcaatagaagagccccgagccttccacccaccgaat
gtatccccccgtatgttgcacccagccgctcatccgccacagcagaatgcagtgatggtt
gacattcatgaacagatccaccagggcacagtccctgtctcctacacagtaacaacggta
gcaccacatgggattccgctctgcacaggccagcacataccagcttgtaacacacagcag
gtcccaggatgttctgtggttttcagtggacagcaccttcccgtctgcagtgtgcctcct
ccaatgcttcaggcatgctcagtccaacacttaccagtgccatacgcagcgtttccaccc
cttatttctagtgatccatttcttttgcatcctcctcacctctctccacaccatcctcct
cacctgccaccgccaggccagttcgttcccttccaaacacaacagtcacggtcgccactt
caaaggatagagaacgaagtagaactgcttggagaacaccttccagtaggaggttttacc
tatcctccctcagcccatccaccaacactgactccctcagcccctctccagttcttaacg
cacgaccctttacaccaggaggtgtcctttggagtaccttatccaccctttatgcctcga
agactcacagggcgcagtagatatcgatcccagcagccaataccaccacccccttatcat
cccagcctgttaccatatgtgctatcaatgcttccagtgccacctgcagttggaccagct
ttcagctttgagttggatgtggaagatggagaggtggaaaactacgaggcgctgctgaat
ttggcagaacgattgggagaagccaaaccacgaggactgacgaaagcagacattgaacag
cttccatcttaccggttcaatccaaacaaccaccagtcagaacagactttgtgcgtagta
tgcatgtgtgattttgagtcaaggcagctacttagagtcttaccttgtaaccacgagttc
catgccaagtgtgtcgataaatggcttaaggcaaatcgtacctgcccaatttgtagagct
gatgcttcagaagtgcatcgtgattcagaatga
DBGET
integrated database retrieval system
