Caretta caretta (Loggerhead turtle): 125636691
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Entry
125636691 CDS
T09292
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04137
Mitophagy - animal
ccay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125636691
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125636691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125636691
03009 Ribosome biogenesis [BR:
ccay03009
]
125636691
04131 Membrane trafficking [BR:
ccay04131
]
125636691
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125636691
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125636691
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125636691
Membrane trafficking [BR:
ccay04131
]
SNARE
SNARE associated proteins
Others
125636691
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125636691
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125636691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
125636691
NCBI-ProteinID:
XP_048706186
LinkDB
All DBs
Position
5:982891..1016076
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGPGSGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcggacgacttatctaccgcaattctaaagcagaag
aacaggcccaatcggttaattgtcgatgaagccatcaatgaggacaacagtgtcgtatca
ctgtcccaggcaaaaatggatgaattgcagctgttcagaggagacacagttctgctaaaa
ggaaagaagaggagagaagcagtctgcattgtcctgtcagatgatacctgctcagatgag
aagattcgcatgaacagggttgttcgtaacaatctgagagtgcgccttggtgatgtgatc
agcatccagccctgcccagatgtgaagtatggcaaacgcatacatgtgttaccgattgat
gacacagtggaagggatcacagggaatctgtttgaggtctacctcaaaccatacttcctg
gaagcatatagaccaatcagaaaaggtgacatcttccttgtgcgtggagggatgcgtgct
gtggagttcaaagtggtggagacagacccaagcccttattgtatagtggctccagataca
gtgatccactgtgaaggggagcccatcaaacgagaggatgaggaagagtccctgaatgaa
gtgggctatgatgacattggaggctgccggaagcagctggcccagatcaaggagatggtg
gagcttccgctcagacaccctgcacttttcaaggccataggtgtgaagcctccccgtgga
atcctgctgtacggcccgcctggtaccggcaagaccctgattgcacgtgcagtggctaac
gaaactggagctttcttctttctgatcaatggtcctgagatcatgagcaagttggctggt
gagtctgagagcaatctgaggaaagcttttgaggaagctgaaaaaaatgcgcctgccatc
atcttcatcgatgagctggatgccattgctccgaagagagagaagacccatggagaggtg
gaacgtcgcatagtgtcgcagctgctgactcttatggatggcctgaaacagagagcacat
gtgattgttatggcagctaccaacagacctaacagcattgaccctgcactcaggcgattt
ggtcgctttgacagagaggtagatattggtatccctgatgccaccggccgcctggagatt
ctacagatccacacaaagaatatgaaactggctgacgatgttgatctggagcaggtggcc
aatgagacccatggccatgttggtgctgacttggctgccctttgctccgaagctgctctt
caggccatcaggaagaagatggatctcatagacctggaggatgaaaccattgatgctgaa
gtgatgaattcactggccgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccctcagctctgcgggagaccgtggtggaggtgccgcaggttacctgggaagatattggt
ggtctagaagatgtcaagagagaactccaggagcttgtgcagtatcctgtggagcaccca
gacaaattcctcaaattcggcatgactccatccaaaggggtcctgttttatgggccacct
ggctgtggtaagacactgctggctaaagccattgccaatgaatgccaggccaacttcatt
tccatcaaggggccagagcttctcaccatgtggtttggggagtcagaagccaacgtgcgt
gagatctttgacaaggcccgccaagcagcaccctgcgtgctcttctttgatgagctggac
tccattgcaaaggctcgaggtgggaacatcggtgatggtgggggcgccgcggaccgtgtc
attaatcagattctgacagagatggatggcatgtccaccaagaagaatgtcttcatcatc
ggtgctaccaacaggccagacatcatcgacccggccatcctgcgccctggccgcctggat
cagctcatctatatccccctgcctgatgagaagtcacgaatcgccatcctcaaggccaac
ctgaggaagtcccccgttgccaaggatgtggacctggagttcctggcgaagatgaccaac
ggcttttcaggagctgacctgaccgagatctgccagcgtgcctgcaaactggccattcgc
gagtccattgagaacgagatcaggcgagagcgcgagaggcagaccaacccttctgccatg
gaagtggaggaggacgacccggttccggagatccgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagtgacaacgacatcaggaaatacgagatgtttgcacag
actctacagcaaagccgcggcttcggcagcttcagattcccgtccggtaaccagggtggc
gctggcccaagccaaggcccaggcagtggcagcggggggaacgtgtacagtgaagacaat
gacgacgatctctatggttaa
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