Caretta caretta (Loggerhead turtle): 125636720
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Entry
125636720 CDS
T09292
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03420
Nucleotide excision repair
ccay04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125636720 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
125636720 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125636720 (ERCC8)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125636720 (ERCC8)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125636720 (ERCC8)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
125636720 (ERCC8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
WD_LRWD1
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
125636720
NCBI-ProteinID:
XP_048706254
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All DBs
Position
5:complement(37503958..37558546)
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AA seq
395 aa
AA seq
DB search
MLAFISARQAGLDDPLRLRRAESTRRVLSLELNKDRDVERIHGTGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENFSRKPCYTCKAICSVGRSHPDVHKFSVETVQWYPRDTGMFTSSSF
DKTLKIWDTNTLQPADVFNFEGTVYSHHMSPVATKHCLIAVGTKSPEVQLCDLKSGSCSQ
ILQGHRQEVLAVTWSPRYEYVLATASADSRVKLWDVRRASGCLITLDQYNGEKSKASSEA
ANTAHNGRVNGLCFTSDGLHLLTIGTDDRMRLWNSSSGENTLVNYGKVCNESRKGLKFTI
STGCDPEFAFVPYGSTIAVYTIYSGELITMLRGHYSTVDCCVFQPNFQELYSGSKDCNIL
AWVPALREPMPDEDAEKQHLNPAFEDGWSSSDDEG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttggctttcatttcggcccgccaggccggtctcgacgatccgctgcggttgcgccgg
gctgagtccacccggagggtactaagcttggagttaaacaaagatagagatgtggaaaga
atccatggaactggtgttaacaccctggatattgaacctgttgagggaagatacatgtta
tcaggtgggtcagatggtgttattgtactttatgaccttgaaaacttcagcagaaaacca
tgttatacatgtaaagcaatttgttctgtgggcaggagccatcctgatgtacacaaattc
agcgtagagacggttcaatggtatcctcgtgacactggcatgtttacatcaagctcattt
gataaaacattgaaaatatgggatacaaacacattacaacctgcagatgtgtttaatttt
gagggaacagtttatagccatcatatgtctccagttgctaccaagcattgcttaatagca
gttggtaccaaaagccccgaagtacagctttgtgacttgaagtctggatcctgttctcaa
attctgcagggtcacagacaggaagtgctggcagtgacctggtccccacgttatgagtat
gtcttggcaactgcaagtgctgacagtagagtaaaactctgggatgtgaggagagcatct
ggatgtctgattactcttgatcagtacaatggggagaagtcaaaagcatcttctgaagca
gcaaacactgctcataatggaagagttaatggcttatgctttacaagtgatgggcttcat
cttctgactattggtacagatgaccggatgagactctggaatagttccagtggggaaaac
acattggtgaactatgggaaagtctgtaatgaaagcagaaaaggactaaaattcaccatc
tctactggctgtgatccagaatttgcatttgtaccatatggtagcaccattgctgtttat
acaatctactcaggagaactgataactatgcttaggggacattatagtactgttgactgc
tgtgtatttcagcctaattttcaggaactatatagtggtagcaaagattgcaatatcctt
gcgtgggttccagctttacgagagccaatgcccgatgaagatgctgaaaagcaacactta
aatccagcatttgaagatggatggagcagcagtgatgatgaaggatga
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integrated database retrieval system
