Caretta caretta (Loggerhead turtle): 125636755
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Entry
125636755 CDS
T09292
Symbol
MEX3C
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125636755 (MEX3C)
04121 Ubiquitin system [BR:
ccay04121
]
125636755 (MEX3C)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125636755 (MEX3C)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125636755 (MEX3C)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125636755 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
Prok-RING_4
zf-C3HC4
RING_XB3-XBAT31
KH_2
KH_DEAH11_2nd
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125636755
NCBI-ProteinID:
XP_048706340
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All DBs
Position
5:complement(15528400..15558947)
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AA seq
636 aa
AA seq
DB search
MPSGSAAAAACPQEEPAEAQRLPPPPLLLLQQPDTLLLRECLAGLGLHDRGLAGSGEAAA
RQQARERLAGLPPLPEPGPDGAEEVDDEGDLELEEELLAAEEEEEEEDPASLLLSSSSSS
SPSQLPPGGPPPPHPLLPGLGSVLLSPAAAFDAQETAVAGVLYGADDPQGMMAAMLSHAY
GGGLGGGPAAAPALNGEQAALLRRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTN
TYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAAEHFSMIRASRNKNGPALGGLPCTPNL
PGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRA
REEIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGTLGSAWLTSNPVPPSRTRMISNYR
NDSSSSLGSGSTDSYFGSNRLADFSPTSPFSTGNFWFGETLPSMGTEDLAVDSPAYDSLP
TPSQTIWAPFEPVNPLSGFGSDPAGNMKAQRRGSQPSTPRLSPTFPETLEHPLARRVRSD
PPSTCNQVGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRRKHDCVICFENEVIAALVPC
GHNLFCMECANKICEKETPSCPVCQTAVTQAIQIHS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcggcagtgccgccgccgccgcctgcccccaggaggagcccgccgaggcccag
cgtctgcccccgccgccgctgctgctgctccagcagccggacactctgctcctgcgggag
tgcctggccgggctgggcctccacgatcgcggcctagcgggcagcggggaggcggccgcc
cggcagcaggcccgggagcggctggcggggctgcccccgctgcctgagccggggcccgac
ggggcggaggaggtcgacgacgaaggggacctggagctggaggaggagctgctggcggct
gaggaggaggaggaggaggaggacccggcctcgctgctgctctcctcgtcctcctcttcc
tcgccctcacagctgccgccggggggcccgccgccgcctcacccgctcctgcccgggctc
ggctccgtgctgctgtcccccgccgccgccttcgatgcccaggagacggcggtggccggg
gtgctgtacggggcggacgatccccagggcatgatggcggcgatgctgtcccacgcctac
ggcggcggcctaggcggggggccggcggcggccccggctctgaacggggagcaggcggcg
ctgctgcggaggaagagcgtcaacaccaccgagtgcgtcccggtgcccagctccgagcat
gtggccgagatcgtcggccgtcagggttgcaaaataaaagcattaagagccaagacgaat
acttacattaagacccctgttcgaggagaagaacccatttttgtcgtcactggacgaaaa
gaggatgtagccatggccaaaagggaaattctctcagcagctgaacacttctccatgatc
agagcatcacgcaacaaaaatggtcctgctctgggtgggttgccatgtactcccaacctg
ccaggtcagactacagtccaagtgagggtgccttaccgtgtagttgggctggtggttgga
cccaaaggagctacaatcaaaagaattcagcagcagacacacacgtacattgttactccc
agcagagacaaggagccagtctttgaggttacagggatgcctgaaaatgtagaccgtgca
cgtgaagaaatagaaatgcatattgccatgcgcacaggaaactacatagagctgaatgaa
gaaaatgatttccattacaatggtacagatgtgagctttgaaggcggcactcttggatct
gcttggcttacttccaatcctgtccctcctagccgcaccagaatgatttctaattataga
aatgacagctccagctccttaggaagtggctccactgattcctattttggaagcaataga
ttggctgacttcagcccaacaagtccattcagcacaggaaacttttggtttggagaaacg
ttgccttcaatgggcacagaagatcttgcagttgactctcctgcatatgactccttacca
acgccttcccaaaccatctgggccccttttgaaccagtaaacccgctatctggctttggt
agcgaccctgctggtaacatgaaggctcagcgtcgaggaagtcagccatccactcctcgt
ctgtcacctacatttcctgaaactttggaacatccgcttgctaggagagtgagaagtgac
ccacccagtacatgcaaccaggttggccttccaatatacatccctgctttttctaatggt
accaacagctactcctcttccaacggcggttccacatccagttcaccacccgagtctaga
cgaaagcatgactgtgtgatatgctttgagaatgaagttattgctgccctagttccttgt
ggccacaatctcttctgtatggaatgtgccaacaagatctgtgaaaaagaaacgccatca
tgtccagtttgccagacagctgttactcaggcaatccaaattcactcttaa
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