Caretta caretta (Loggerhead turtle): 125636772
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Entry
125636772 CDS
T09292
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125636772 (SMC5)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
125636772 (SMC5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
FtsK_SpoIIIE
ATG16
AAA_21
BLOC1_2
Rab11-FIP3
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
125636772
NCBI-ProteinID:
XP_048706390
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All DBs
Position
5:complement(92684859..92761805)
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AA seq
1148 aa
AA seq
DB search
MAAPGKRKLGAATTGSGAGWRKRGSGAAGPEGSGRGQLQSPFVEGSIVRVAMENFLQCCV
DGRASLTDIAAASPGDGQTAPTGEGLRRHSSVFSEVLQWRSCTAIHEDKLLLISLSSSKC
GYVLTYDNCEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPSFIGRADKVGLYVKRGC
SKGLVEIELFKTPDNLIITREIHVANNASVWFVNKKPSTLKIVEEQIAALNIQVANLCQF
LPQDKVGEFAKLSKTELLEATEKSVGPPEMYQFHCELKNFRERERELENSLQEKTNFLEK
MKQRNERYKQDVERYYERKRHLDLIEMLERKRPWVEYENVRQMHEEVKQNRDHAKEELKK
LQQTKSPMTQQIQEVEKQWRNLDIKIKEKAAEIKDTSQRCKQKQDAVEKKDKQIEEIQQV
LRMKRDEEMDRQKRIHNARKMIEDWQNELNSTGNSENLQPQIDSINNELRQLQEEKANID
GEMSDLRRERENLEREKKRVTDRIVQFNNMMNLKEDKLRGRYRDTYNALLWLRENKDRFK
RSVCEPMMLAINMKDNRHAKYVENHISANDMRAFVFESQEDMEIFLREVRDHQKLKVNTV
CAPAESCAENRPSRSVEELHQYGVFSYLRELFDAPHPVMSYLCSQYRVHDVPVGTEKTRS
MIERVIQETKFKQIYTAEERYSVKVSAYTNQTISSNTSLRPAQFLTVTVDADERRQLENQ
LKDINRRFQLRDSQLHTLYERQKYLERKDNELRQQKKEHLERKNKRKQLESKISMKHDSL
KQMEQDAINLEEESQQTNARIKEINIQKAKLVTELMQLIKNCITLNILKVDLVLQSTTVN
SKKNRLESDYKAATVQLRALEQQVSDLGEKKRVLLEKCKGLMRKARQACNLSPDQEIPKD
FQTAFQDLPSTLDEIDALLNEEKSRASCFTGLNASVVEEYNRRAQEIQQVTEELEEKKNE
LESYRQNISQVKERWLTPLKQLVEQINEKFSNFFSSMQCAGEVDLHTENEEEYDKYGIRI
RVKFRSNTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRV
FEMVVKTACKESTSQYFFITPKLLQNLTYAEKMTVLFVYNGPFMLEPTKWNLKAFRRRRR
QVEQMDQY
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgggcaaacggaaactcggggccgccactaccggcagcggcgccgggtgg
aggaagcgaggctcgggggctgccgggccggagggaagcggccgtgggcagctgcagtcg
cccttcgtggagggctccatagtcagggtcgctatggagaatttcctacagtgctgtgtt
gacgggagggcttctctcaccgacatagctgctgcctctccaggagatggacaaactgca
ccaacaggagaaggtcttcgaagacatagtagtgtcttcagtgaagtgctacagtggcgc
agctgtactgctatacatgaagacaagctgttacttatatccctgagctcttctaagtgc
ggctatgtgttaacatacgataattgtgaagtgtctccaggaccccatttgaacatgata
gtaggagccaatggaacaggaaagtcaagcattgtgtgtgcgatctgtctgggattggca
ggaaaaccttctttcatagggcgtgcagacaaggttggtctatatgtaaagcgagggtgc
tctaaaggcttggttgaaattgaactgtttaagactcctgacaatctcattatcacacgt
gagattcatgtagcaaacaatgcatctgtgtggtttgtcaataaaaagccctcaacactg
aaaatagtagaggagcaaattgcagccttaaatatccaagtggccaatctgtgccagttt
cttcctcaggacaaagttggggaatttgcaaaactgtccaagactgagcttcttgaagcc
acagagaaatcagttggcccgccagaaatgtaccaattccactgtgaactaaaaaacttc
agagagcgagagagagaacttgagaattcattgcaagagaaaactaatttcttggagaaa
atgaagcaaagaaatgaacggtataagcaagatgtggagagatactatgaacgcaagcgt
catctagatttaatagagatgcttgagagaaaaagaccgtgggtggaatatgaaaatgtt
cgccaaatgcatgaggaggtgaaacaaaaccgtgaccatgcaaaggaagaattaaaaaaa
ctacaacaaacaaagtctcccatgacacagcaaatccaagaagttgaaaagcaatggagg
aatttggatataaaaatcaaagagaaggctgctgaaatcaaagacacttctcaaagatgt
aaacaaaaacaagatgcagtggagaagaaagacaaacaaattgaagaaattcagcaagtt
ttgagaatgaaaagagatgaagaaatggatcgacagaagagaatacacaacgctcgtaag
atgatagaggactggcagaatgagctcaacagtacaggaaactctgagaatcttcaacca
caaattgattctattaacaatgagctgagacagttgcaagaagaaaaggcaaatattgat
ggtgaaatgagtgatctgcgaagagagagagagaacctagagagggaaaagaaaagagta
actgatcgcattgtacagtttaacaatatgatgaatctgaaggaagataagctcagaggg
agatatcgagacacatacaatgctcttctgtggctaagggagaacaaagaccgatttaaa
agaagtgtctgtgaacccatgatgcttgcaataaacatgaaagacaatagacatgctaaa
tatgttgaaaatcacatttcagcaaatgatatgagggcctttgtttttgaaagtcaagaa
gacatggaaatatttcttcgggaggtgcgtgaccatcagaaattaaaagttaatactgta
tgtgcacccgctgagtcatgtgctgaaaatagaccttcaagatcagttgaagagttgcac
caatatggtgttttctcttatttacgagagttatttgatgctcctcatcctgtgatgagt
tacctttgttcccagtatcgtgttcatgatgtccctgtgggaactgagaagaccagaagc
atgattgaaagggtcatacaagaaaccaaatttaagcaaatctacacagcagaagaaagg
tattcagtgaaagtgtctgcttatacaaaccaaactatttctagtaacacatccctgaga
ccagcgcagtttctcactgtcacagtagatgcagatgaaagaaggcagttggaaaaccaa
ctaaaggatattaatagacgtttccagttacgggattctcaattgcatacgttatatgag
aggcagaagtatctggaacgcaaagataatgagctgagacagcaaaagaaggagcatttg
gagagaaaaaacaaaaggaaacaactggaatcaaaaattagtatgaaacacgatagtttg
aaacagatggagcaagatgccatcaatctagaagaggagtctcaacaaacaaatgccagg
atcaaagaaattaatatccaaaaagcaaaacttgttacagaattaatgcaactcataaag
aattgcataacattgaacatcctcaaagtggatttggttcttcagagcactacagtgaat
tccaagaagaatagactagaatctgattataaagcagcaactgtacaactaagagcttta
gagcaacaagtttctgacctgggtgaaaaaaaacgtgttcttttggagaagtgcaaggga
ctgatgaggaaagctagacaggcgtgtaatctcagccctgatcaagaaattccaaaagat
tttcagactgcattccaagaccttccaagcacattggatgaaatcgatgctttactgaat
gaagagaaatcaagagcctcctgcttcacaggcctaaatgcttcagttgttgaagaatat
aatagaagggcacaagaaatacagcaagtaacggaggaactagaggaaaagaaaaacgaa
ttggagagctataggcaaaacatttcacaggttaaagaaaggtggctaacacctttgaaa
cagctggttgaacaaattaatgaaaagttcagtaatttctttagttctatgcagtgtgct
ggtgaagttgatcttcatacagaaaatgaggaggagtatgacaaatatgggattcgaatt
agagttaaattccgtagtaatacccaactgcatgaactgactccccaccatcagagtgga
ggtgagagaagtgtttcaactatgctgtacttgatggctctgcaggaactcaacagatgt
cctttcagggttgtagatgaaataaatcagggaatggacccagtcaatgagaggagagtt
tttgaaatggttgtgaagactgcttgtaaagagagcacttctcagtatttctttattacg
ccgaagctcctgcaaaatctcacctatgctgaaaaaatgacagtgttgtttgtctacaat
ggaccttttatgctagaaccaaccaaatggaacttaaaggcattccgtaggcggcggcga
caagttgagcaaatggatcagtattga
DBGET
integrated database retrieval system
