Caretta caretta (Loggerhead turtle): 125636832
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Entry
125636832 CDS
T09292
Symbol
SKIC3
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125636832 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125636832 (SKIC3)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
125636832 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_12
TPR_8
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_17
ANAPC3
TPR_9
Fis1_TPR_C
ARM_TT21_C
TPR_15
BTAD
Rapsyn_N
DUF7923
Zw10_middle
TPR_30
TPR_20
TPR_10
Motif
Other DBs
NCBI-GeneID:
125636832
NCBI-ProteinID:
XP_048706515
LinkDB
All DBs
Position
5:complement(59965252..60047604)
Genome browser
AA seq
1567 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAQ
SAYKKAAELEPSQLLAWQGLANLYEKSNQTDVKENLFNVYQKLLELYESTDKQKWCEVCR
KLVELYHQEKKYLEVARTWHKLIKIKQEEGADNAELHQLWKRLIQLLPDSTQNQDNETQQ
LLFTAFEHAVNSVDTVPSEDHQKLYKNFIQCLSKFPHETARLKKACDDMMVLYPTMSYPL
EVLCLHFIQSGSFTEEAQHCCCRLMEMDSSSSPGLIGLGIKFLQEKKYEEAVKSLTEGLQ
QTSQCQAAWYYLAEAQMKMHKHKEAVISCNRALKISGQLDDDDDSGNLQQKYLALRLKAE
ALIKIAGADTAEEAISTLAQVSDINNDPVLLALKGQAYLNKGLIDQASKVAQQLVLSHLH
LAEAHALEGLIHYTQKNYQQAERSFQRAIERKAETAEYHYHLGLTYWFMGEEIRKDKTKA
LTQFLKAAKLDSYMGSVFCYLGHYYRDVAGDKSRARGCYKKAFELDRTDGEAGAAAVDLS
VELGDTEAALAILTAVTERASAGTAKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDS
NCWESLGEAYLSRGGYTTALKSFTKASELNPKSIYSIYKAASIEQILGRYKDAIAEYQQI
LKKSKEYVPALKGLGECYLMMARAALADYLDGKVLDYVEQALEYFTRATKHRPDVSCLWK
LLGDACTIVHVISSSKVNVKVLGSLIGQNVGKQMLKKSELLSLGGRCYGRALKLMSSPNT
WCDLGINYYRQAQHLTAADSDTNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVACCS
GVGNYALAQHSFIKSVQAEQINVVAWTNLGVLYLATENIQQAHEAFKVAQSLEPSYLMCW
IGQALIAEAVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKTNRETELYRYNIVQ
MNAIPAAHVVLSKYTERIQNDASAFTMLGYLNEYLQLKNQATDAYQRAVSLLKNSEDKEK
YNIAMQNYGRSLCAIGQYDKAIQAYMSTPLSELEDIVGVALAYFKKGLLQDSIKAYERAL
SLAESEQDKAHILTALAIMEYKQNKVDAAKTLLFKCSILKELTTESLQALCTLGLAKQDA
TLATAALKELLKHTKSKDNVYERCLITSAVYALQGRNVGVQRQASKAVHSNPGDPALWSL
LSRIVPLYTPHNAKGGAVAGNVAHMLDLNHGKKALLHTAVNQLAVGCHSAEDEKNNALKD
IQKAVHLFPDDPATWAVLMGACHAENTVVYLNNTQPKRRDLEMTLVATVSAKTKEKDLSA
EYIQALEDWSLCQAITGLKETGRITEAEALCTRSLKSCPDHPDLFLLLRQVQCKQLFQSH
KELPDTVLEELHKTVMSNSTSVTAWHWLAKVYQSQRMMVAAEMCYRKSLQLASQQGSWNG
KLSSLLRLAMLALEICVANISNDHWPSLVQEATTEALKLSFCPLAVLLQALLQYNRKMGA
RETRRMLERVVYQPGYPETIVSVARWYLLRHLYAKDDYELIDALVANAKANGDIRSLELD
KKLSASA
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcactgaaaagtgccagagatgcaataagaaataaa
gaatacaaagaagccttaaaacattgcaaggcagtgctgaaacaagagaaaaataactac
aatgcctgggtgtttattggcctggcagctgcagagttagagcagcctgatcaggcccaa
agtgcatacaaaaaggctgctgaacttgaacccagccagctactggcatggcagggatta
gcaaatttgtatgagaaatctaaccaaacagatgtcaaagaaaacttgttcaatgtttac
caaaagctcttggaactctatgaaagtactgacaagcagaagtggtgtgaagtgtgtagg
aaacttgtggaattgtatcaccaagaaaaaaagtacctagaggtggctcgcacatggcac
aaactgataaagataaaacaggaggaaggtgcagataatgctgagctccaccagctatgg
aagaggctgatccaattactgccagacagtacacagaatcaagataatgagacacagcag
ttgctttttactgcatttgaacatgcagtgaactctgtagacacggttcccagtgaagac
caccaaaagctttataaaaacttcattcagtgtttgtcaaaatttcctcatgagactgcc
aggctgaagaaggcttgtgatgatatgatggttttgtatcccaccatgagttatccttta
gaagtgctctgcttgcactttattcagtcaggcagtttcactgaagaggctcagcattgt
tgttgcaggcttatggagatggactcaagtagcagcccaggccttattggtttaggtatc
aaattcctccaagaaaaaaaatatgaagaagctgtcaagagcttaactgaaggtttgcag
cagaccagccagtgtcaagcagcatggtattatctggctgaggcgcaaatgaaaatgcat
aaacacaaagaagctgttatttcctgcaatcgagctcttaagatatcaggacaacttgat
gatgatgatgatagtggcaatctacagcagaaataccttgcccttcgtttgaaagcagag
gctcttattaaaatagcaggcgctgacactgcagaagaagccattagcactcttgcgcag
gtttcagatataaataatgacccagtgcttctagctctcaaaggtcaggcttatctgaac
aaaggtttgattgatcaagcttcaaaggttgcacaacagcttgtgttgtcccacctgcac
ctggcagaagcccatgctcttgaaggtttgattcattatacccaaaagaattatcaacag
gcagagagaagctttcaaagagcgattgaaagaaaagctgaaactgcagagtaccattac
cacctcggactcacttactggttcatgggtgaagaaataaggaaagataaaacgaaagct
ctcactcagtttctgaaggctgcaaaactggacagctacatgggaagcgtcttctgctat
ttaggccattactacagagatgtagctggagacaaaagcagggctcgtggctgctataaa
aaggcttttgaactagatagaactgatggagaagctggagcagcagctgtagacttaagt
gtggaacttggagacacggaggctgctctggcaatcttgactgcagtaactgaaagagca
agtgctggtacagcaaagtgggcctggcttcgtcgtggactttactacctgagagccggt
cagcactctcaagcagtggctgacttgcaggcagctctaagggcagatccaaaggactcc
aactgttgggagtctctaggagaggcatacctgagcagaggtggctatacaacggcactg
aagtccttcacaaaggccagtgagctgaatcccaaatcgatatacagtatttacaaggct
gcatcaattgaacagattctaggaaggtataaagacgctatagctgaataccaacaaatc
ttaaagaagtcaaaagaatatgtacctgcactcaaaggtctgggagagtgctatctcatg
atggcacgggctgctcttgcagactatcttgatgggaaagttctagattatgtagaacaa
gcacttgaatattttacacgagcgacaaaacatcgtcctgatgtatcttgcctttggaaa
ctacttggggatgcatgtactatcgtgcatgttatttcatcatccaaagtgaatgttaaa
gttctgggatcccttattggtcagaatgtaggcaaacaaatgctgaagaaaagtgagctc
ctcagtttgggaggaaggtgttatggcagagcattaaaactgatgtcctcacctaacaca
tggtgtgatcttggaataaactactatcgtcaagcacaacacctaacagcagccgatagt
gacacaaatgagatcagtgaactgttagagaaatctttacagtgtctcaaaaaagccgtg
aggcttgatagtaaaaaccatctctattggaatgcacttggtgtggttgcctgttgcagt
ggtgttgggaattatgctcttgctcaacattcattcatcaaatctgttcaagctgaacaa
ataaatgttgttgcctggaccaacttgggggttttgtacttagcaactgaaaacattcag
caagctcatgaagccttcaaagtagctcagtcccttgagccatcttacttaatgtgctgg
attggacaggctcttattgcagaggctgtaggcagctatgaaactatggatctttttagg
cacaccactgaactcagcatgcatactgagggagcaaaaggctatgctcattgggtgtgc
tcaacgctgcaagataaaaccaacagagaaacagagctgtatcggtacaacattgttcaa
atgaatgctattccggcagcacatgtggttttgagcaaatacacagaaagaattcaaaat
gatgcatctgctttcacgatgctgggttatttgaatgaatatctgcaactgaaaaatcag
gcaacagatgcttatcaaagggcggtctccttgctgaagaactctgaagataaagagaag
tataacatagcaatgcaaaattatggtagatcactctgtgccataggtcaatatgacaag
gccatccaggcttacatgtccactcctctctcagagttagaggacatcgtaggagttgca
ctagcttacttcaagaaagggcttttacaagacagcattaaagcctatgagagagccctg
tctcttgctgaatctgaacaagacaaagcccatattttgactgcccttgcaataatggag
tacaaacagaacaaagtggatgctgcaaagacgttgctgtttaaatgctctatattaaag
gaacttactacagaaagcctgcaggctctgtgcaccctaggtctggcaaagcaggatgct
acacttgcaacagcagcacttaaagaattactgaagcacacaaaaagcaaggataacgtt
tatgagagatgccttattacatctgctgtgtatgcgctgcaaggtagaaatgtgggagtg
cagaggcaagcttccaaagctgtccatagtaacccaggtgatcctgctctttggtctctt
ctctctcgaattgttcctctgtatacgccacataatgcaaagggtggagctgtggcagga
aatgttgctcatatgcttgatttaaaccatggaaagaaagccctgctgcatactgcagtt
aatcagttggcggtgggatgtcattcagctgaagatgagaaaaacaatgcactgaaggat
atccaaaaggcagtacatctttttccagatgatcctgctacatgggcagtgctaatgggt
gcctgccatgctgaaaatactgttgtctatttgaacaacacacagcctaagagaagagac
ctagaaatgacacttgtagccacagtttcagccaaaactaaagaaaaggacctctcagct
gagtacatccaggctcttgaagactggtcactttgtcaagctattaccggtttaaaagag
actggtagaattacagaagctgaggctctctgcacaaggagtttaaaaagttgccccgat
cacccagatctgttcctgctcttgagacaagttcagtgtaaacagctttttcagtcacac
aaagagcttccagatactgtcttggaggaacttcataaaactgtcatgtccaactccact
tcagtaacagcgtggcattggctggcaaaagtgtaccagtctcaaagaatgatggttgca
gcagagatgtgttacagaaagagtctacaattggcatcccagcagggcagctggaacggg
aagttatcaagtttgctcaggctagctatgcttgcactggaaatctgtgtggctaacatt
tcaaatgatcattggccatccttggttcaggaggcaacaactgaagccttgaaactttct
ttctgcccactggctgttcttctgcaagcgctgctacagtacaatcgcaaaatgggggcg
agggagacgcgtcgaatgttggaaagagtggtatatcagcctgggtatccagaaaccata
gtatcagttgcacgctggtacctcctaaggcatttatatgccaaagatgattatgaatta
atagatgcacttgtagcgaatgccaaagctaatggagatattagatctctggaactagac
aagaaattatcagcatctgcctag
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integrated database retrieval system
