KEGG   Caretta caretta (Loggerhead turtle): 125636840
Entry
125636840         CDS       T09292                                 
Symbol
ELL2
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125636840 (ELL2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccay01009]
    125636840 (ELL2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccay03021]
    125636840 (ELL2)
Protein phosphatases and associated proteins [BR:ccay01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125636840 (ELL2)
Transcription machinery [BR:ccay03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125636840 (ELL2)
    Little elongation complex (LEC)
     125636840 (ELL2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 125636840
NCBI-ProteinID: XP_048706540
LinkDB
Position
5:complement(60338785..60405299)
AA seq 640 aa
MAALREGGRYGVSCGRVIQDNITVLHVKLTETAFRALESYQGSKNRIPSRPSIQFQGLQG
LVKIPKADLPNEVHNFNFYLSNVGKDNPQGSFDCVQQTVSSSGASQLNCLGFIQDKITVC
ATNDSYQMTRERMTQAEEESRNRSTKVIKPGGPFVGKRVQIRKAPQSIPDAVPERKRSTP
INPANTIRKTHVNNSVSQRPYRDRVIHLLALKTYKKPELLARLQRDGVNQKDKNSLAAIL
QQVANLNPKDNSYTLKDYVFKEIQKDWPGYNEIDKQSLELVLSRKLNSSQNVTSTSHLES
PLSSSKDAASASPSQKRLLDSDFIDPLMNKKPRISHLTNRVQPTLNGHLTASNERATAPP
PPPPPPAAAATPTPPTLPSTRLPVSNPPQPVNSNSNSPSTPEGRGTQDLPVDSFSQNGNS
IFEDQQEKYTSRTPLEMPAPTAVELACPKSTDEVHSVLHKKSKKKSKKHKEKDQIKKHNM
ESMEEKEKDLKKEEIVKLKNSSLDSSEGVKETCTDSTDPSSTSELPDYFVKYIAIVSYEQ
RQSYKDDFNAEYDEYRSLHARMENVTRRFMKLDAQRKLLSPGSKEYQVVHEEVLKEYRKI
KQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQRQAESWH
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcggcgctgcgggaggggggcaggtacggcgtgtcctgcggcagggtcatccaggac
aacatcacggtgctgcacgtcaagctgaccgagaccgccttccgggctctggagagctac
cagggcagcaagaatcgtattccttctcgaccctcaatccaatttcaaggactccaaggg
cttgtcaaaattcctaaagctgatctcccaaatgaagtgcataactttaacttctacttg
tcaaatgttggcaaagataatcctcagggaagctttgattgtgtccagcaaactgtctca
agttctggagcctcgcagctcaattgtctgggatttatacaggataaaattacagtatgt
gcaacaaacgactcttatcagatgacaagagaacgcatgacccaggcagaagaagaatct
cgcaaccgcagtacaaaggtcataaaacctggtgggccatttgtaggtaaaagagtacag
attcggaaagcaccacaaagtattccagatgcagtgcccgagaggaaaaggtcaacaccc
atcaatcctgcaaatacaatacgaaagacccacgtaaacaacagtgtttctcagcgacca
tatagagacagggtgattcacttactggcactgaagacctacaagaaaccagagctgctt
gctcgcttgcagagagatggcgttaatcaaaaagacaagaactcccttgcagctatcctt
cagcaggtagccaacttgaatcccaaggacaactcttacactctgaaggattatgtattt
aaagagatccaaaaagattggcctggatacaatgagatagataaacagtcattggagtta
gtactttctagaaaactaaattcatctcagaatgtcaccagcaccagtcatttggaatct
cctctaagttcttctaaagatgctgcatctgcttctccttcccagaaacggctgttggat
tcagattttattgatcctttaatgaataaaaaaccaagaatatctcaccttaccaataga
gttcaaccaacattaaatggtcacttgactgcttccaatgagagagctactgcacccccc
cccccaccacctccccctgcagccgctgccaccccaactcctccaacgcttccttcaact
cgccttcctgtttcaaatcctcctcaaccggtgaactctaactccaattcccctagcact
cctgaaggccgagggactcaagacctgcctgttgatagttttagtcagaatgggaacagc
atctttgaggaccagcaagaaaaatatacctctaggactcctttggaaatgccagcaccc
actgcagttgagttagcgtgtccaaagtcaacagatgaggtacattcagtgttgcacaaa
aaatccaaaaagaagtcaaaaaaacataaggagaaggaccaaatcaaaaaacataacatg
gagagtatggaagaaaaggagaaagaccttaagaaagaagaaattgtcaagctgaaaaat
tccagtttggattcaagtgaaggtgttaaagagacttgcactgactctacagatccttca
tcaacaagtgaactaccagactactttgtaaaatatatagctattgtctcatatgagcaa
cgccagagttacaaggatgacttcaatgcagagtatgatgaatacagaagcttacatgcc
aggatggagaatgtcactagaagatttatgaaacttgatgctcagcgtaagctcctttct
ccaggatctaaggagtatcaggtagttcatgaggaagtcctaaaggaatatcggaagatc
aaacagtccagtcccaactatcatgaggaaaagtacagatgtgaatatcttcataacaaa
ctggctcatattaaaagactaataggtgaatttgaccaacgacaagcagagtcatggcac
taa

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