KEGG   Caretta caretta (Loggerhead turtle): 125636907
Entry
125636907         CDS       T09292                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccay03036]
    125636907 (KDM4C)
Enzymes [BR:ccay01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     125636907 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125636907 (KDM4C)
Chromosome and associated proteins [BR:ccay03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125636907 (KDM4C)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 SLX1_C LBR_tudor Tudor_5
Other DBs
NCBI-GeneID: 125636907
NCBI-ProteinID: XP_048706700
LinkDB
Position
5:97703312..98179376
AA seq 1130 aa
MAAVVSDSPPNPSCKIMTFRPSMDEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRKH
YNDIDDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFRQLANSDKYCTPRYIDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEDIDEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKVAKLCTCRNDMVTISMDIFVRKFQPDRYQLWKQGKDLYTIDHMKPTPETTPEVKAWL
QRRRKTKKPPKCFQHTRSRSKKLKTPEDERESAMIVGAEIIATEAATDGFKVNEKPEEKV
KLVNSEVPSGEEKNISRMQLDQHLLDNIEVSGNMCSNSLFSPTPVMQKIKTEDEDKEDSS
IASFTPKDSTLPRPTSIICINEEDNSLKSQNQAFRVESCQKSPGYASFESECLEKGETNS
VSTEDDVSDLESSESSESGLEPGEIPALAEIERKKTCKSWRHPLSKPPARSPMTLVKQQA
VSDEVKKKKFFLPETNMIEHQVCICKELLEIPLIEEEVQETESWAKPLVHLWQKRAHNFI
AEKEYNAAAAKMEPHCAICTLLMPYYKPDNHNEENYTCWETKSDETFTAGEKTKPLIPEM
CFIYSEENTENYPSNAFIEEDGTSLLISCAKCCVQVHASCYGVPSHEVHDGWLCSRCKKG
AWTAECCLCNLRGGALKQTTDKKWAHVMCAIAIPEVRFGNVTERTPVDTSRIPLQRLKLA
AAWISDKVKYSTSADVDGVLHICRFLHCLSHGDPKTFLRINEKCIFCRQRMKKFSGACIQ
CSYGRCPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRTKACEKAITVGQTVI
TKHRNTRYYSCRVIGVTSQVFYEVMFDDGSFSRDTFPEDIVSRDCRKLGPPAEGEVVQVK
WPDGKLYGAKYLGANVAHMYQVEFEDGSQIAMKREEIYTLDEELPKRVKARFSTASDMRF
EDTFYGADIIQGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3393 nt   +upstreamnt  +downstreamnt
atggcagctgtagtctcggatagtcctccaaacccaagctgcaaaattatgacttttagg
ccttcaatggatgaattcagggagttcaacaaatacttagcatacatggaatcaaaaggt
gctcatcgtgctggacttgcaaaggtgatcccacccaaggagtggaagccgagaaaacat
tacaacgacattgatgatttagtgattccagctccaattcagcagatggtcactggtcag
tcagggcttttcactcaatacaacattcagaaaaagccaatgactgtgaaagagttcagg
caactggccaacagtgacaaatactgcactccaaggtatatagattatgaagatctggag
cgtaaatactggaagaatttaacctttgtggcaccgatctatggagcagatatcaatggg
agcatttatgatgaagatattgatgaatggaatattgcccatctcaatacaatattggac
gttgtgggtgaagactgtggaatttctattgagggtgtaaataccccctatctctatttt
ggcatgtggaaaacaacattcgcatggcacactgaagatatggatctctacagtattaat
tatctccactttggagagccgaagtcatggtatgctatccctccagaacatggaaaacgt
cttgaaagactagctcaaggcttcttcccaagcagctctcaagggtgtgatgcttttctt
cgccacaagatgacactgatttctccctcaatattgaaaaaatatggaattccttttgac
aagatcacacaggaggcaggggaatttatgataaccttcccatatggataccatgcggga
tttaaccatggtttcaactgcgcagaatcaacaaactttgccacaatcagatggattgat
tatggaaaagtagctaaattgtgcacctgcaggaacgacatggtaacaatatccatggat
atctttgtaaggaagtttcaaccagacagatatcaactgtggaaacaaggaaaggattta
tataccattgatcacatgaaacccacgcctgaaacaacacctgaggtaaaggcctggttg
cagagaagaaggaaaacaaagaaacctcccaaatgcttccagcataccagatctcgatct
aaaaagcttaaaactccagaggacgagagagaatcagctatgatcgttggtgcagaaatc
atagccactgaagcagctacagatggcttcaaggtcaatgaaaagccagaagaaaaagtg
aagctggtaaattcagaagtgccttctggggaagagaaaaacattagcagaatgcagctg
gatcagcatttattggataatattgaggtctcagggaacatgtgttcaaactcacttttc
agccctactcctgtaatgcagaaaataaaaacagaagatgaggacaaggaagattccagt
attgcttcctttacacctaaggattctacactcccgagacccacatctatcatttgtata
aatgaagaagacaattctttaaaatctcagaatcaggctttccgggttgaatcatgccaa
aagtcacctggatatgcttcctttgaatcagagtgcctggaaaaaggggaaacgaatagc
gtgtccacagaggatgatgtcagcgacctagaaagcagtgaaagtagtgaaagtggtttg
gaacctggagaaatacctgccttagcagaaattgaaagaaagaaaacatgtaagagttgg
cgtcatccactaagtaaacccccagccagatctcctatgacactggttaaacagcaggca
gtaagtgatgaagtaaagaaaaaaaaattcttcctccctgagacaaatatgatagagcat
caagtatgtatttgcaaagaactgcttgagattcccttaatcgaagaggaagtgcaagaa
acagagtcatgggccaagcctcttgtccacctttggcagaaaagagcgcacaatttcatt
gctgaaaaagaatataatgcagctgcagccaaaatggaaccccattgtgccatttgcact
ctccttatgccctactacaagccagacaaccataatgaagaaaattatacttgctgggaa
acaaaatcagatgagacatttacggctggtgaaaagactaaaccacttattccagagatg
tgttttatttatagcgaagaaaacactgaaaactatccatcaaatgcctttattgaagag
gatggaacaagtcttctaatatcctgtgcaaagtgttgtgtacaggttcatgcaagttgt
tacggtgttccttctcacgaagtccatgatggatggctgtgttctcgatgcaaaaaagga
gcttggacagctgaatgttgtctctgcaatttgagaggtggtgcactcaagcaaactact
gacaagaagtgggcacatgtgatgtgtgcaatcgcaattccagaagtaagatttggtaat
gtcacagagaggacaccagtagacactagcagaatacctttgcagagattaaaattggcc
gcagcatggatatctgataaagtgaagtactccacatctgccgatgtggacggagtactc
cacatctgcagatttctccactgcctttcacatggggaccctaaaacttttcttcgtata
aatgagaaatgtatcttctgcagacagagaatgaagaaattttccggtgcctgcatacag
tgttcttatgggcgttgtccagcttccttccatgttacctgtgctcatgctgcaggggtg
ctgatggagcctgatgactggccttatgttgtctacatcacatgtttcagacacaagatc
aatcagaatgtgagaactaaagcatgtgagaaggccatcacagtggggcagactgtcatc
acaaaacacaggaacacacgatattatagttgcagagtgataggagtgacatctcaagtc
ttctatgaagtcatgtttgatgatggctccttcagtcgggacactttccctgaagatatt
gtaagcagagactgccggaagctaggtccacctgcagagggagaggtggtccaagtgaag
tggcctgatggaaaactgtatggggcaaaatatctgggagcaaatgtagctcacatgtat
caggttgagtttgaagatggttctcagatagcaatgaagagggaagagatctacacatta
gatgaagaactgcctaaacgagtgaaagcccgtttctcgacagcctccgacatgaggttt
gaagacacattttatggagcagatattatccagggagaaaagaagagacagagagtattg
agttcccggtttaagaatgaatatgtggatgaccctgggtaccgtacctttttgaaaagc
tcattccagaagaaatgccagaagggactataa

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