Caretta caretta (Loggerhead turtle): 125637056
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Entry
125637056 CDS
T09292
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
ccay04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125637056 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125637056 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125637056 (ABCA1)
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125637056 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
125637056
NCBI-ProteinID:
XP_048707062
LinkDB
All DBs
Position
5:complement(125445699..125577429)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFNRSIISRLFSDAKRLLLYSQKDS
SLKDAQKLLGKLQKLGNSGSGLKLQDFLVDNETFSDFLHRNVSMPLFAVDEILNAEVNFQ
QVILSGYRMQLRDLCNGSELSEFLTIHNPVVAVVGEAFLCTMPKEKLHTAEQAFRANIDL
LKPVLKGIASNYSLQDLSGAMETLVESLGTLVKELVSMKSWSDMRQEVIFLTNVNSTSSS
TQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDAANFYDNSTTPYCNE
LLKNLESSPLSRIIWRALKPLLIGKILYTPDTPVTRRVMAEVNRTFQELGVFRDLGGMWE
DIGPKIWTFMESSQEMDLIRTLLKSEGLWDTHLSGSNWTVQDVSLFLAKSPEDVQPVNGS
TYTWMDAFNETDQAVQTISRFMECVNLDKLEPVATEVRLINRSMELLDERRFWAGIVFPE
ISPNSAELPPHIKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDVV
EQAIIRALTGTEKKTGVYVQQMPYPCYVDDIFLRVMGRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGTLWFSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTMFSRANLATACGGIIYFTLYLPYVLCVAWQDYVSFSLKMFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNLFESPLEEDGFNLTISAFMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKTYWFGEESEERRHAHSDHKGPSEHCMEEEPIHLSLGVS
IQNLVKIYRDGKKVAVDGLTLNFFEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLSEEKVKEEMQQMVLDVG
LPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCIGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSVISNLIMKHVPEARLVEEIG
HELTYILPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDNGVDAET
SDGTLPARRNRRVFGDRQSCLHPFTEDDVFDPNDSDIDPAESRETDLLSGVDGKGSYQMK
GWKLIRQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPDDAGTQKLVNTLVNEPGFGTRCVEGHSIPDTPCLVREDKWTTAS
VPDTVLDVFLNGNWTMENPSPACECSNEKIKKMLPVCPPGAGGLPLPQREQNTGDILQNL
TGRNVSDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSVGASSSLLLPPSDEVSDAIKQVKK
ILELAKGSSGDQFLHSLGSFMKGMDTKNNVKVWFNNKGWHAIGSFLNVINNAILRANLQD
GENPSTYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPALAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
EILKSVFLVFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
AVFFLITVLIQYRFFIKPRPVSAKLSPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQGVHQNMGYCPQFDAINELLTGREHLEFFALLRGVPEKEVCQVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGSPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPNLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSVLSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDMSLHKNQTVVDIAILTSFLRDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctgggattgctgctatggaagaacttcacatacaggcgaaga
cagacatttcagctgctgattgaagttgcttggcctctctttatcttctttatactgatc
tccgtacgcctttcgtatccgccctacgaacaacatgaatgtcactttccaaacaaggcc
atgccttcagcaggaaccttgccctggatccaagggattatctgtaatgccaacaaccct
tgcttccgctacccaacgcctggggaatccccaggtgtcgttggaaacttcaataggtcc
atcatttcccgcttgttctcggatgccaagaggttactcttgtacagccagaaggacagc
agcttaaaggatgctcagaaactcctgggaaaactgcagaagctcgggaactctggctca
ggtttgaaacttcaggatttcctggttgacaatgagaccttctcagactttctccatcgt
aatgtttccatgccattgtttgctgtggatgagatactgaatgcagaggtcaacttccag
caggtcatcctgtctggctatcgaatgcagctgagagatctgtgcaatgggtcagagctg
tctgaattccttacaatccacaacccagtagtcgcagtggtcggcgaagccttcctctgc
accatgcctaaggaaaaactccacacagcagaacaagcctttcgtgctaatatagacctt
ttgaagcctgtactgaaaggaatcgcctccaattactccttacaggatctgtcaggagcc
atggagaccttggtggagagtcttgggacgctcgttaaagagctggtgagcatgaagagc
tggagtgacatgaggcaggaggtgatatttctgaccaatgtgaactccacaagctcctcc
acccagatctaccaggcggtgtcgcggatcgtgtgtggccatccagagggaggagggttg
aaaatcaaatctctcaactggtacgaggacaacaactacaaagccctgtttggaggcaac
agcaccgaggaggatgcagcgaatttctatgataattctacaacaccctattgcaatgag
ctgctgaagaatcttgaatccagtccactttcccgaattatttggagggctctgaagcct
ttgcttattgggaagatcctgtacactcctgacaccccggtcacgaggagggtcatggct
gaggtgaacaggactttccaggagctgggcgtgttccgggacctaggagggatgtgggag
gacataggcccgaagatttggacattcatggaaagcagccaggaaatggatctgatccgg
acgctgctgaagagcgaaggcctctgggacactcacttgagcggctcaaactggacggtt
caagatgtttccctgttcttggcaaagtccccagaggacgttcagccagtgaatggctcc
acatacacctggatggatgccttcaatgagactgaccaggctgtccaaaccatctcccgc
ttcatggagtgtgtcaacctggacaaactggagcccgtggccacagaagtgcggctcata
aacaggtccatggagctcctggatgagaggaggttctgggctggcattgtcttccctgaa
atctccccgaacagtgcagagctgcctcctcacatcaagtacaagatacggatggacata
gacaatgtggaaaggacaaacaagattaaggatgggtactgggaccctggtcctcgtgct
gacccctttgaagacatgcggtatgtctggggcggcttcgtgtacttgcaggatgttgtg
gagcaggcgatcatcagggcgctgactggcacggagaagaagactggtgtctatgtacag
cagatgccctacccctgttacgtggatgatatattcctgcgtgtcatgggccgttccatg
cccctcttcatgactctggcctggatctactcggtggctgtaataatcaaggggattgtg
tacgagaaggaagcccggctgaaggagaccatgagaatcatgggcctggacaatggcacc
ctctggttcagctggttcatcagcagcctcatccccctcctcatgagcgctgggcttctg
gtgctgatcctgaagatgggaaacctgctgccctatagcgaccccagtgtggtgtttgtc
ttcctctccgtctttgccgtggtgaccatcttgcagtgcttcctcatcagcaccatgttc
tccagggccaacctggcaacagcctgtggggggatcatctatttcaccctctacctgccc
tacgtgctgtgcgtcgcctggcaggactacgtgagcttctccctgaaaatgtttgcgagc
ctgctgtccccggtcgcctttgggtttggctgcgagtactttgcattgtttgaggagcag
ggggttggcgtgcagtgggacaacctctttgaaagccccctggaagaagatggcttcaac
ctcaccatatctgcgttcatgatgttgtttgataccttcctctatggggttatgacctgg
tacattgagtctgtcttcccaggccagtatggaattcccaggccctggtacttccccttt
acaaagacttactggttcggcgaggaatctgaggagaggcggcatgctcactctgatcac
aaagggccgtcggagcactgcatggaggaggaacccattcatctaagcctgggggtctcc
attcagaacctggtgaagatttatcgtgatggcaagaaggttgctgtggatgggctcaca
cttaatttctttgaagggcagatcacatcctttctgggacataatggagctgggaaaacc
acaaccatgtccatcttaactggtttatttcctccgacctcgggcacagccttcatcctg
ggcaaagatatccgctccgagctcagcaccatcaggcagaacttgggcgtctgtccccag
cacaatgtcctctttgacttgctgactgtggaagagcacatctggttctacgcacgtctg
aaagggctgtcagaagaaaaggtgaaagaggagatgcagcagatggtgctggacgtcggc
ctgcctcacaaactcaaagctagaaccagcaaactctctggtggcatgcagagaaagctg
tcggtggccttggcctttgtgggtggatcaaaggttgtcattttggacgagccaacagct
ggggtggatccttactctcgccgagggatatgggaactgcttctgaagtatcgccaagga
cgcaccatcattctgtccacacatcacatggatgaggcagacatcctaggggacaggatc
gccatcatatctcatggcaaactgtgctgcattggctcttccctgttcctgaagaaccag
ctgggaacaggctattacctgaccctggtcaagaaggatgtggactcttcactgagctcc
tgcagaaacagcagcagtacggtgtcgtacctgaaaaaggacgacagtgtctcccagagc
agctcggatgctgggcttggcagtgaccatgaaagtgacaccttgacaatagacgtctct
gttatctccaacctcattatgaagcatgttcctgaggccaggctggtagaggagattggc
catgagttaacctacatcttgccatatgaagctgctagagaaggagcttttgtggagctg
ttccatgagatcgacgaccgtctctctgacctgggcatttcgagttacggcatctcggag
actaccctggaggaaatctttctcaaagtggctgaagataatggggtggatgcagagacc
tcagacggcacattacctgcaagaaggaacaggcgtgtctttggagacagacagagctgc
cttcatccattcacagaagatgatgttttcgaccctaatgattcagacatagatccagca
gaatccagagagacagacctgctcagtggggtggatggcaaaggctcctaccagatgaag
ggctggaagctcatccggcagcagttcgtagctctgctgtggaagaggctgctcattgcc
aagcgcagcaggaagggtttcttcgcccagatcgtactgccagctgtgtttgtgtgcatt
gctctcatgttcagcctgatcgtacctccctttgggaaataccccagcctggaactgcag
ccctggatgtatgatgagcagtacacttttatcagcaatgacgcaccagatgatgcaggc
actcagaagcttgtgaacactcttgtcaatgaacccggctttgggacccgctgtgtggaa
ggacactccattccagacactccttgcctggtcagagaggataaatggaccaccgcctct
gtccccgacacggtcctggacgtcttcctgaatggcaactggaccatggagaacccttcc
ccggcctgcgaatgcagcaatgagaagatcaagaaaatgctccctgtgtgcccacctggc
gcgggggggctgcctcttccacagagagaacagaacactggcgacatcctgcagaacctg
acgggccggaacgtatcggactatctggtgaagacctacgcgcagatcattgggaaaagt
ttaaggaacaagatctgggtgaatgagttcaggtatggtgggttttcagtgggtgccagc
agttccctcctgcttcctcccagcgatgaagtcagtgatgccatcaagcaagtgaagaaa
atcttggagctagccaaggggagttctggagatcagtttcttcacagcttgggaagcttc
atgaaagggatggacacaaaaaacaacgtgaaggtttggttcaataacaaaggctggcat
gccattggctcctttctgaatgtgatcaacaatgccatcctccgggccaaccttcaagac
ggcgagaatcccagcacctacgggatcaccgcattcaaccacccgctcaacctcaccaag
cagcagctctctgaggtcgccctgatgaccacgtcggtggacgttttagtctccatctgt
gtgatcttcgccatgtcctttgtcccagccagctttgtggttttcttgatccaggagcgg
gtcagcaaggccaagcacctgcagttcatcagcggggtgaagccggtgatctactggctg
gctaacttcgtctgggatatgtgcaactacatagttccagccaccttggttatcatcatc
ttcatctgcttccaacagaagtcctacgtgtcctcttccaacctgcctgcgctggccctt
ctcctcctgctctatgggtggtctataacgccactcatgtacccagcttcctttgtgttc
aagatccccagcacagcctacgtggtgctgaccagcgtgaatctcttcattggcataaat
ggcagcgtggccactttcgtcctcgagctcttcaccaacaacaagctgaacaacatcaat
gaaatcctgaagtctgtcttcctcgtcttcccccacttctgcctggggcggggactcatc
gacatggtgaaaaatcaggccatggccgacgctttggaaaggtttggcgagaaccgtttt
gtgtcccctctgtcctgggatctggtgggacggaacctctttgccatggctgtggaaggg
gcagtcttcttccttatcacagtgctcatccagtacaggttcttcatcaaaccgaggcct
gtcagtgccaagttgtctcctgtcaatgatgaggatgaggatgtgaccagggagaggcag
aggataattagtggtggtggacagagtgacatccttgaaatcaaagagctgaccaagatt
tatagaatgaagagaaaaccagctgttgaccggatctgtgttggaatccctcctggggag
tgctttggcctcctgggagtgaatggcgctggcaagtcgtcaactttcaagatgctaact
ggagatacagatgtgacgggaggagaagcttttctgaagggaaacagtatcttatctaac
atccaaggagtccatcagaacatgggctattgccctcagtttgatgctattaatgagctg
ttgacagggagagaacatctggagttctttgcacttttacggggtgttcctgagaaagag
gtctgccaggttggcgaatgggcaattcgtaaactgggccttgtgaaatatggagaaaaa
tatgctgggaactacagcggaggaaacagacgcaagctctccactgctattgccctgatt
gggagccctccggtggtgttcctggatgagccaaccacgggaatggatcccaaagcacgc
cgtttcttatggaactgtgctctgagcatcatcaaggaggggagatcagtggtgcttaca
tctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaacggg
cggttcaggtgtcttggcagtgtccagcatctgaagaacaggtttggagatggttataca
atagtagtgcgaatagcgggggcaaaccctaacctgaagcccgttcaggaattctttggg
cttgcctttcctggcagcgtcctgaaggagaagcatcggaacatgctgcagtaccagctt
ccatcctcaccatcctctctggccaggatatttagcgtcctctcccagaacaaaaaaaga
ctccacatagaagactactccgtttctcagactacacttgatcaagtgtttgtaaacttt
gccaaggaccaaagcgatgatgaccacacaaaggacatgtcattgcacaaaaaccagact
gttgtggacattgcaatccttacttcctttctgcgagatgagaaggtgaaagaaagttgc
gtgtga
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integrated database retrieval system
