Caretta caretta (Loggerhead turtle): 125637106
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Entry
125637106 CDS
T09292
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125637106 (DDX4)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125637106 (DDX4)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125637106 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-GeneID:
125637106
NCBI-ProteinID:
XP_048707153
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All DBs
Position
5:33910286..34014182
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AA seq
690 aa
AA seq
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MGDEDWDTEIQDRVASFVPDFQQLDNFSGRANDPSFSCNQSINSADAGVRPNRSQPMRGG
FGTGRSFGNRASLGNKFEERSSSGFERESTEDGQSRALSRRGGFQEGSYSENLGTRRGVA
GGFRGGRGGFGQSQNNENEQRVQQSGSASISRRGGFGGPTGDNDSNRSRGFGSKGGYRGY
NEEVIAGSGRSSWKPHGETESGDNQGPKVTYVPPPPPDNEEAIFAHYQTGINFDKYDTIL
VEVSGLDPPPAILTFEEANLCQTLNKNIAKAGYLKLTPVQKYSIPVILAGRDLMACAQTG
SGKTAAFLLPILAHMMKDGVTASHFREQQEPECIIVAPTRELINQIFLEARKFSYGTCIR
PVVIYGGTQTGHSIRQIKQGCNILCATPGRLMDIIGKEKIGLRKVRYLVLDEADRMLDMG
FGPEMKKLISCPGMPSKDRRQTLMFSATFPEEIQRLAGEFLKPEYLFVAVGQVGGACSDV
QQTILQVSQYSKREKLVEILQSIRDERTMVFVETKKKADFIATFLCQEKIPTTSIHGDRE
QREREEALGDFRSGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCG
NIGKAISFFDSVSDSHIAQPLLKVLSDAQQEVPSWLEEIAFSAHGTGFSNPRGNIFASVD
TRKTYQGKDSMNAGGLTMSYTARAADESWD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaggactgggacaccgagatccaggaccgcgtggcatccttcgtaccagac
ttccagcagctggataacttttctggacgagcaaatgacccctcatttagctgcaatcag
agcataaattcagcagatgctggtgtgagacctaacagaagtcaacccatgcggggtggg
tttggtactggaaggagttttgggaacagagcttcactagggaataaatttgaagaaaga
agcagctctggatttgagagagaatctactgaagatggccaatcaagagcgctttcaagg
agaggaggttttcaagaaggaagctattcagaaaatcttggcacacgaagaggtgttgca
gggggtttcagaggtggccgtggaggatttggacaaagtcagaataatgaaaatgagcaa
cgagttcagcagtctggtagcgcctctatctcgaggagaggagggtttggaggtcctaca
ggtgataatgacagtaacagaagcagaggatttggaagcaaaggaggatacagaggttac
aatgaagaagtaatcgcaggttcgggaagaagttcttggaaaccgcacggcgaaacagaa
agtggtgataatcaaggtccaaaggtgacctatgtgccaccacctccacctgacaatgaa
gaagccatctttgcacactaccagacaggaattaattttgacaaatatgacacaattctt
gtggaagtatcaggacttgatcctccaccagcaatactgacttttgaagaagctaatctt
tgtcaaacattgaacaagaacattgctaaagctggatatttgaaacttacgccagtgcag
aagtatagtattcctgttatacttgcagggagagatttaatggcatgtgcccagacagga
tctggaaaaacggcagcttttcttttgccaattttggctcacatgatgaaagatggggta
actgccagtcacttcagagagcagcaagaaccagaatgtattattgtagccccaactaga
gaactgataaaccagatctttctggaagcaagaaagttttcatatggaacttgcataagg
ccagttgtgatatatggaggtacgcagacaggtcattcaattcgtcagataaagcaaggc
tgtaatatattatgtgctaccccgggaaggcttatggacatcataggaaaagaaaagatt
ggactgcgtaaagtgagatatttggtgttagatgaagccgaccgtatgctcgatatgggt
tttggtccagagatgaagaaattaatctcttgcccaggcatgccatcaaaagacaggcgt
caaacactaatgtttagtgccactttcccggaagaaattcaaaggctggctggagaattt
ttgaaacctgaatatttatttgttgctgttggacaagtgggtggagcctgtagtgatgtt
caacagaccattcttcaagtttcccaatattccaagagagaaaaactggttgaaattctg
caaagcataagagatgagcgaactatggtgtttgtggaaacaaagaaaaaagcagacttc
attgcaacctttctttgtcaagaaaaaataccaaccaccagtattcatggtgatcgggaa
cagagagagcgagaagaggctcttggggactttcgctctggaaaatgtcctgttcttgtt
gctacttcagtagcagcaagaggcctggatattgaaaatgttcaacatgttattaatttt
gatcttccttccactattgatgaatatgttcaccggattgggcgaactggacgctgtggg
aacattggaaaagccatttctttctttgattctgtttcagacagccacatagcccaacct
ctgcttaaagtgctttcagatgctcagcaggaagttccatcatggctggaagaaattgcg
tttagtgctcacggaactggctttagcaatccaagaggaaatatctttgcgtctgttgat
actcgaaagacttaccaaggcaaagacagtatgaacgcaggaggacttactatgtcatat
actgcaagagcagctgatgagtcatgggattaa
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