Caretta caretta (Loggerhead turtle): 125637155
Help
Entry
125637155 CDS
T09292
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125637155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125637155
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
RNases
125637155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
HHD_RTEL1
zf-C2HC_3
Motif
Other DBs
NCBI-GeneID:
125637155
NCBI-ProteinID:
XP_048707279
LinkDB
All DBs
Position
5:complement(109339054..109368195)
Genome browser
AA seq
1092 aa
AA seq
DB search
MLHSVGYFSGFSCPFDGASGGGCPRPHCQYRHGAGRSGQQPLSDAPAMELGKSIQELERI
KKAIESVKTEVEEGQKKLSQYNLQDEILKNSLTSKINDVKGNKTSPDDDGLCSSLTKDKC
LVAPVSKYSSKGCRLLSGKYVIDNSCPATDLEYDPLLNYSAGLLSSSIMKEEENDTQQFK
RVKMPLADFHMDCPKMSPCGNQHGSPKKRPRSYSPIKLEIKLQESDDDDILVIDAPPLTV
TKKPRISRSFKNWNREDNKHVAVTCPENLQNSDMAEDPLKCIEEKRAEVTVTLQKDDNTD
VSNPEKSLKTSPKTRSAYLPDVKINALKSLNNLHEQRKLFTVSKENNISSVSHIKAQMQK
ETLKKEDPKSEISVKTSVEELSTNKYKNIPSCKRETQTSQYFEASSKDKTAQGTCKKLPV
NIGKIQIIQEHGENQVLGNAPIHPSTPLNLGEKVCHDVDLSTKNHSGESNSNTMNTTIKE
SEIIILDSSSEEEMEYSEEDTEVSESDDPIEECRRIFNEFVESEAQKQEIAKQALGAHAE
VDTLDTKTNMVPGQKKRIAHTAKFDVQTNKEILVPFKAPLPQQSCPTRILQAQQQAVQIT
AAVKSGQAFVAATSGQKKTVPVLSTTQIQNVGPMVCLNLLEVQPVATSSGQLNVFLQGNA
VTAMPCRPSNISVKRIAPMPIKVSSRRRPSIIPESGSKVPHDTRQRYVNFFVEEYLKVCR
TINEAFDKALVEEKAIYDRCGSKNMYLNIAVNTLKKLRDQGSLSPNGQSCGSRCTNATGS
RKLEEKNDFTGIVLYRILKDYVLTEEQLHENGYPQPNPEKPGSAILSNGITKTAVSDASK
RVCCRCGEIYTVTASGKHIRKEECNYHSGRVLRQKVPGGLETRYSCCEGVVGSPGCQVAK
LHVHDGRKENLEGFVKTFIKLTPADGNHGVFALDCEMCYTTQGLELTRVTVVDSNLQVAY
DTLVKPDNEIIDYNTRFSGVTEEDLKNITSSIRDVQAILLNLFSADTILIGHSLENDLFA
LKLIHNTVVDTAVVFPHRLGLPHKRALRNLMADYLRRIIQDDVGGHDSSEDAAACMELML
WKVKEDTKGRKW
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactccgtgggttacttcagtggcttctcctgccctttcgatggcgcctcgggc
ggcggctgcccgcggccccactgccagtacaggcacggggcggggcggagcgggcagcag
ccgctgagcgacgcgcctgccatggagctaggtaaaagtatacaagaattggaaagaatc
aaaaaagcaattgagtcagtcaagactgaagttgaagaagggcagaagaaactctctcag
tataatttgcaagatgaaatacttaaaaactctttgacatctaaaataaatgatgttaaa
ggaaataaaacttccccagatgatgatggtctgtgtagctctcttacaaaagacaaatgt
cttgtagctccagtctcgaagtactctagcaaaggctgtcgtttgttatccggtaaatat
gtcattgacaatagttgtccagcaactgaccttgaatatgatccacttctaaattattct
gcaggcctactcagctcttccataatgaaagaggaggaaaatgacacacagcaatttaag
cgggtgaaaatgcctcttgctgattttcatatggactgtccaaaaatgtctccctgcgga
aatcagcatggatccccaaagaagagaccaagaagctattcacctatcaagcttgaaata
aagctccaagaatctgatgatgatgatattctggttattgatgctccaccattgactgtc
actaagaagccaagaataagtaggagctttaaaaactggaatagggaagacaacaaacac
gttgctgtaacatgtccagaaaatctgcagaatagtgacatggcagaagatcctcttaag
tgtattgaggaaaaaagagcagaagttactgtaactctgcaaaaggatgacaacacagat
gtaagcaaccctgaaaaatcactgaaaacttcaccaaaaactcgaagtgcatatttgcct
gatgtgaaaattaatgctttgaagtctttaaataaccttcatgaacaaagaaaattgttc
actgtctctaaggaaaataatatatcttcagtttctcatattaaggcacagatgcagaaa
gaaactttgaagaaagaagatccaaagagtgaaatatcagtgaaaacatctgttgaagaa
ttgagtactaataaatataaaaacataccgagttgcaagagagagacccaaactagccag
tattttgaagccagctcaaaagacaaaactgcacaagggacttgtaaaaaattaccagta
aatatagggaaaattcagattatacaagaacatggagaaaatcaagtattgggaaatgca
cccattcaccctagcactcccttgaatttgggtgagaaagtttgtcatgatgtagatctc
tcaactaaaaaccatagtggagaaagtaatagtaatactatgaacactaccatcaaagaa
agtgaaataattatattagattcttcttcagaagaagagatggagtatagtgaagaggat
actgaagtatctgaatctgatgaccctatagaggaatgccggagaattttcaatgagttt
gttgaaagtgaagcacagaagcaagaaattgctaagcaggctcttggagctcatgctgaa
gtagatacattggatacgaagacaaatatggttcctgggcagaagaaaagaattgcacac
actgcaaaatttgatgtacagaccaacaaagaaatacttgtgccttttaaggcacctctt
ccacagcaatcttgtcctaccagaatcctgcaggcacagcaacaggcggtgcagataaca
gctgctgttaaaagtggacaggcttttgttgctgcaacttctggacagaagaaaactgta
cctgtattgtcaactactcagattcaaaacgtaggaccaatggtatgtttaaatttgctt
gaagttcaacctgtggcaaccagcagtggtcaactgaatgtattccttcaaggaaatgct
gtaacagcaatgccatgcagaccttctaatatttcagtaaaaaggattgctcctatgcct
attaaggtttctagtcggagaaggccttctataattccagaatctggatccaaagttcca
catgacacaagacaacgatatgtcaacttttttgttgaagaatatttgaaagtttgtaga
acaataaatgaagcttttgataaggcattggtagaagaaaaagcaatttatgatcgttgt
ggcagtaaaaatatgtatctgaacatagctgtgaacacccttaaaaagctgagggatcaa
ggtagtctctctccaaatgggcagtcttgtggcagcagatgtactaatgcaactggatct
agaaaattggaagagaagaacgattttacaggaattgttctctatagaattctaaaagat
tatgttctgactgaggaacaattgcatgagaatggctacccacaaccaaatcctgaaaaa
cctggcagtgctatattaagtaatggaattacaaaaacagctgtatctgatgcttccaaa
agagtatgttgtagatgtggagaaatatacactgttactgcttcaggaaagcacattcgt
aaagaagaatgcaactaccattctggtagagtactaagacaaaaagttcctggtggcttg
gaaacacggtatagctgttgtgaaggagtagttgggtctcctggatgccaggttgcaaag
ctccatgtccatgatggccgaaaggaaaacctggaaggcttcgtgaagacgtttatcaaa
ctaactccagctgatggaaatcatggtgtgtttgcactcgactgtgagatgtgttacaca
acacaaggtctggaacttactagagtgacagtggttgattccaacctacaggttgcctat
gatacacttgttaaaccagataatgaaatcatagactataatactagattttctggagtg
acagaagaggacttgaagaacattacgtcatctattcgggatgtgcaggcaatattgcta
aacttattcagtgcagatactattttaattggacacagcttagaaaatgatttatttgct
cttaagctgattcataacactgttgtggacacagcagtggtgtttcctcatcggctaggc
ttgcctcataaaagagcacttagaaatctaatggctgattacctcagacgaattattcaa
gatgatgttggtggccatgattctagtgaagatgctgctgcttgtatggaactgatgctt
tggaaagtaaaggaggatacgaagggcagaaaatggtga
DBGET
integrated database retrieval system
