Caretta caretta (Loggerhead turtle): 125637280
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Entry
125637280 CDS
T09292
Symbol
PCDH8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125637280 (PCDH8)
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125637280 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Sde0182_C
TMEM154
Motif
Other DBs
NCBI-GeneID:
125637280
NCBI-ProteinID:
XP_048707519
EnsemblRapid:
ENSCECG00000015041
LinkDB
All DBs
Position
1:complement(62379293..62383830)
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AA seq
1008 aa
AA seq
DB search
MGLARDGRSLSSPPRLLYLCWLLSVTLCKTVRYRTYEEDAPGTVIGTLAEEMHVKAPGEI
SFRLMEQFSNSSLVRVREGDGQLSIGEAGIDRERLCGPSLQCVLAFDVVSLWQEQYRLVH
VELEVRDINDNAPRFPQAHIPLEVSESAAPGTRLPLEIALDPDVGSNSIQSFRLSRNSHF
GIEAQTRADGGKSAELVLLQELDRETQAAYTLELVAQDGGSPARSGTATVSVRVLDANDN
SPAFPQGSVTVELGEDAPRGSLLLDLEAADADEGPNGEIVYGFGSQVPAEARQLFRLDPL
SGRLTLEGPVDYERQRTYELDVQAQDRGASPLAATCKVIVRLADVNDNAPGISVSPLSGA
PAGAGVAYVSEAAARDSFVALVSTSDRDSGPNGQVRCALYGHEHFALQRAYADSYVLVTA
APLDRERVAEYNLTLVAEDLGSPPFKTVRQYTVRVSDENDNAPLFSKPVYEVAVLENNPP
GAYLATVVARDPDLGRNGKVLYRLLETQVLGAPISTYVSVDPATGAIYALRTFNYEILKQ
LDLRIQASDGGSPQLSSSALIKVRMVDQNDNAPVITHPVLANGSVEIGVSSQAPPDSLVA
QIKARDADDGVNAELTFSFVEEPQQPELFAINKKTGEIVLRGDLSKELGQVFKVILTVTD
NGRPPLVTTATINFLVTATAPSSSQEVAKPSSWEGKALEWDIPLIVIIILAGSCTLLLVA
IITIATTCNKRKKETEIKNNGPLTEQIDISHLEKGRQEDSSPRGNVFEARSFPSKASFTS
PAPSPPAEEVSSSETSTVNACLYEGQKRLRATNGESYVPAPNYSKESTQPVAIWKGHSFN
TISAREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSD
RCWSPSCGRSNPHSSPHPSAQLSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVL
HRDFDRTITLLSPPRSGRLPELQEIGVPLYQAPSTRYLAPQTDTSEKV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttgctagggacgggcgcagcctctcctctccgccgcgcctcctctacctctgc
tggctgctctcggtcaccctctgcaagacggtgagataccgcacttacgaggaggacgcg
ccaggcacggtcatcggcactttggcagaagagatgcacgtgaaagcgcccggagagata
agtttccgcctgatggagcagttcagcaacagctcgctggtgcgggtgcgggagggggac
gggcagctgagcatcggcgaggcagggatcgaccgggagcggctgtgcggcccgtccctc
cagtgcgtcctggctttcgacgtggtgagcctgtggcaggagcagtaccggctggtgcac
gtggagctggaggtgcgggacatcaacgacaacgcgccgcgcttcccccaggcgcacatc
ccgctcgaggtgtccgagagcgccgcgcccggcacccgcctgccgctggagatcgccctg
gacccggacgtgggctccaactccatccagagcttccggctctcgcgcaacagccacttc
ggcatcgaggcgcagacgcgggcggacggcgggaaaagcgccgagctggtgctgctgcag
gagctggaccgcgagacccaggccgcctacacgctggagctggtggcccaggacggcggc
agcccggcccgctcgggcacggccacggtgagcgtccgggtgctggacgccaacgacaac
agcccggccttcccgcagggctcggtcacggtggagctgggcgaggacgcgccgcggggc
tccctgctgctggacctggaggcggccgacgccgacgaggggcccaacggcgagatcgtc
tacggcttcggcagccaggtgccggccgaggcgcggcagctcttccggctggacccgctc
tcgggccgcctgacgctggaggggccggtggattacgagcggcagcggacctacgagctg
gacgtgcaggcgcaggaccggggcgccagccccctggcggccacgtgcaaagtcatcgtg
cgcctggccgacgtgaacgacaacgcgccgggcatcagcgtcagccccctgagcggcgcc
cccgccggcgccggggtggcctacgtcagcgaggcggcggcgcgcgacagcttcgtggcg
ctggtcagcacctcggacagggactcgggccccaacgggcaggtgcgctgcgccctctac
gggcacgagcacttcgcgctgcagcgcgcctacgccgacagctacgtgctcgtcaccgcc
gcgccgctggaccgcgagcgcgtggccgagtacaacctgaccctggtggccgaggacctg
ggctcgccgcccttcaagaccgtccggcagtacacggtgcgcgtgagcgacgagaacgac
aacgcgccgctcttctccaagcccgtctacgaggtggcggtgctggagaacaacccgccg
ggcgcctacctcgccaccgtggtggcccgcgaccccgacctgggccgcaacgggaaggtg
ctttaccggctgctggagacacaggtcctgggcgcccccatctccacctacgtctctgtg
gatccggccaccggggccatctacgccctcaggacattcaactatgagatcctcaagcag
ctggacctgaggatccaggcgagtgatgggggctcccctcagctgtccagcagcgccctg
atcaaggtgaggatggtggaccagaatgacaacgccccggtcatcacccaccccgtgctc
gccaacggctccgtggagatcggggtctccagccaggcacccccggattccctggtggct
cagatcaaagccagagacgcggacgatggggtcaatgcggagctcaccttctccttcgtg
gaggagccgcagcagccagagctctttgccatcaacaagaagacaggcgagattgtgctc
aggggggacctgtccaaagagctgggacaggtgttcaaagtcatcctcaccgtgactgac
aatggcaggccccctcttgtcaccacagccacaatcaacttcctggtgactgccacggca
ccctccagcagccaagaggtggccaagccaagctcctgggaggggaaggctttggagtgg
gacattcccctgattgtcatcatcatcctagctgggagctgcaccctgctgctggtggcc
atcatcaccattgcaaccacctgcaacaagcgcaagaaggagaccgagatcaagaacaac
gggcccctgacagagcagatcgacatctcccacctagagaaggggaggcaggaggatagc
agccccagagggaatgtgtttgaagcgcgatcctttcccagcaaagcttctttcaccagc
ccagccccttctccacctgcagaagaggtctcctcttctgagaccagtactgtgaatgcc
tgtctctacgagggtcagaaacgacttagggcaactaacggggagtcctatgtccctgct
cctaattatagcaaagaatccacccaaccagtggccatctggaagggtcattctttcaac
accatatcggcccgagaagcggaaaagttcagtggcaaagatagtggcaaaggcgacagc
gactttaacgacagtgactctgacatcagtggggatgccctgaagaaggatctcatcact
cacatgcagaatggattatgggcttgtactgctgaatgcaaaatcctgggccattcggac
cgctgctggagcccatcctgtggccgatccaaccctcactcgtctcctcatccctcagct
cagctgtccaccttctgcaaaagcacctccttgcccagggacccccttcgcagggacaac
tactaccaggcccagctgcccaagacagtgggactgcagagtgtctacgagaaagtgtta
cacagagactttgacaggacaatcacattgctgtcccctcctcgctctgggaggcttcca
gaacttcaggagattggggtgcccctataccaagccccttcaactagatacctagccccc
cagactgacactagtgaaaaggtttaa
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