Caretta caretta (Loggerhead turtle): 125637286
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Entry
125637286 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125637286
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125637286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
125637286
NCBI-ProteinID:
XP_048707531
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All DBs
Position
1:62678996..62684142
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AA seq
1001 aa
AA seq
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MSPGLTLSRAGLSSVLLCLLVAGCLGETVRYHTDEEDAPGTVFGVLSDDLQSSSGDRPLG
SFRLMEQFSNSSLVRVREGDGQLSIGEAGIDRERLCGPSLQCVLAFDVVSLWQEQYRLVH
VELEVRDINDNAPRFPQAHIPLEVSESAAPGTRLPLEIALDPDVGSNSIQSFRLSRNSHF
GIEAQTRADGGKSAELVLLQELDRETQAAYTLELVAQDGGSPARSGTATVSVRVLDANDN
SPAFPQGSVTVELREDAPRGSLLLDLEAADADEGPNGEIVYGFGSQVPAEARQLFRLDPL
SGRLTLEGPVDYERQRTYELDVQAQDRGASPLAATCKVIVRLADVNDNAPGISVSPLSGA
PAGAGVAYVSEAAARDSFVALVSTSDRDSGPNGQVRCALYGHEHFALQRAYADSYVLVTA
APLDRERVAEYNLTLVAEDLGSPPFKTVRQYTVRVSDENDNAPLFSKPVYEVAVLENNPP
GAYLATVVARDPDLGRNGKVLYRLLETRSPGGGPRSGLISLDPHSGSVHARQPLDCEELP
LAEVELEACDGGAPQLCQRARLRVRVVDQNDNAPAITSPPLANGSAELLLPVSAPAGYLI
ARFAASDADQGANSELSYSLRGGAHPLVALNRDTGELALRRRLRGGASEAAFPLVVAVHD
RGRPSLSCTAAVRLIPTDTLPSSVEIVVVQPSAEELQRQPRLDPSVVLIAVLAGGCGLLL
VAIIAVASSCRRSKTHFQRGPEEQGGGQEARLLKGSGSQAGSSSPGQADFCQLSVTTESE
SPSETSQAEDSSRESLCHSAQGRKARSRDSQGQVLVPFHSPSLWQEQESASSLSSHSTPD
QFSVKDSGKGDSEFNDSDSDISGEGLKKPPSQTAGKQVGTTASTDGWTYKDTERYCRFYV
QQSQTRKTIPLHYENDYMIAYSTTPIYQPILQLGKSNFLPQQPKLKECYQVNIPKTEKLY
ERVLSGEPEMPPTTLVRQCKGLNHPPQNTLLPNASEVATSF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctggtctcacgttgtccagagcgggactaagctctgtgctgctgtgtctcctg
gtcgcagggtgcctgggtgagacggtcaggtaccacacggacgaggaagacgcccccggt
acagtctttggggtgctgtcggacgatttgcagtccagctctggggacagacccctcggc
agtttccgcctgatggagcagttcagcaacagctcgctggtgcgggtgcgggagggggac
gggcagctgagcatcggcgaggcagggatcgaccgggagcggctgtgcggcccgtccctc
cagtgcgtcctggctttcgacgtggtgagcctgtggcaggagcagtaccggctggtgcac
gtggagctggaggtgcgggacatcaacgacaacgcgccgcgcttcccccaggcgcacatc
ccgctcgaggtgtccgagagcgccgcgcccggcacccgcctgccgctggagatcgccctg
gacccggacgtgggctccaactccatccagagcttccggctctcgcgcaacagccacttc
ggcatcgaggcgcagacgcgggcggacggcgggaaaagcgccgagctggtgctgctgcag
gagctggaccgcgagacccaggccgcctacacgctggagctggtggcccaggacggcggc
agcccggcccgctcgggcacggccacggtgagcgtccgggtgctggacgccaacgacaac
agcccggccttcccgcagggctcggtcacggtggagctgcgcgaggacgcgccgcggggc
tccctgctgctggacctggaggcggccgacgccgacgaggggcccaacggcgagatcgtc
tacggcttcggcagccaggtgccggccgaggcgcggcagctcttccggctggacccgctc
tcgggccgcctgacgctggaggggccggtggattacgagcggcagcggacctacgagctg
gacgtgcaggcgcaggaccggggcgccagccccctggcggccacgtgcaaagtcatcgtg
cgcctggccgacgtgaacgacaacgcgccgggcatcagcgtcagccccctgagcggcgcc
cccgccggcgccggggtggcctacgtcagcgaggcggcggcgcgcgacagcttcgtggcg
ctggtcagcacctcggacagggactcgggccccaacgggcaggtgcgctgcgccctctac
gggcacgagcacttcgcgctgcagcgcgcctacgccgacagctacgtgctcgtcaccgcc
gcgccgctggaccgcgagcgcgtggccgagtacaacctgaccctggtggccgaggacctg
ggctcgccgcccttcaagaccgtccggcagtacacggtgcgcgtgagcgacgagaacgac
aacgcgccgctcttctccaagcccgtctacgaggtggcggtgctggagaacaacccgccg
ggcgcctacctcgccaccgtggtggcccgcgaccccgacctgggccgcaacgggaaggtg
ctttaccggctgctggagacacggagcccgggcggcggcccccgctccggtctgatctcc
ctggatccccacagcgggtccgtccacgcccggcagccgctggactgcgaggagctgccg
ctggcggaggtggagctggaagcctgcgacgggggcgccccccagctctgccagcgggcc
cgcctcagggtccgggtggtggaccagaacgacaacgccccggccatcacctccccgccg
ctggccaacggctccgccgagctgctgctgcccgtcagcgcccccgccgggtacctgatc
gcccgcttcgcggccagcgacgcggaccaaggcgcgaactccgagctctcctactccctc
cggggcggcgcccacccgctggtcgccctgaaccgggacaccggggagctggccctgcgg
aggaggctgcgcggaggggcctcggaagcggccttcccgcttgtcgtcgctgtccacgac
cgcgggaggccgtcgctgtcctgcacggccgccgtccggctcattcccacggacacactc
ccctctagcgtggagatcgtggtcgtgcagccctcggccgaggagctgcagcggcagccc
cgcctggacccctccgtggtcctcatcgctgtgctggccgggggctgcggcttgctgctg
gtcgctatcatcgccgtggcctccagctgcaggaggagcaagactcacttccagcgtggg
cccgaagagcaggggggaggccaggaagccaggctgctgaagggctcaggctcccaggca
gggagctcctccccaggccaggcagacttctgccagctctctgttaccaccgagtctgag
agccccagtgagacttcccaggcggaggacagcagcagagagtccttgtgtcattctgcc
caagggaggaaagccaggagcagagactcccagggtcaagttcttgttccttttcattcc
ccatctctttggcaggagcaagaatctgcttcgagtttaagctcccattcaactcctgat
cagtttagtgtgaaagacagtgggaaaggagatagcgagtttaatgatagtgattctgat
atcagtggggaggggttaaagaagccaccttcacagacagctggaaagcaagttggtact
acagccagtacagatggatggacttacaaggacacagaaagatattgtagattttatgtc
caacagtcccaaacacgcaaaaccatcccattgcattatgaaaatgattatatgattgca
tattctacaacaccaatttatcagcccatccttcagctcgggaagtccaattttcttcca
caacagccaaagctgaaagagtgttatcaagttaatattcctaaaactgaaaaactatat
gaaagagttctaagtggtgagccagaaatgccaccaaccactctggtgagacagtgtaaa
ggactaaatcaccctccacagaacactttactcccaaacgcctctgaagtagcaacgtca
ttctga
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