Caretta caretta (Loggerhead turtle): 125637339
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Entry
125637339 CDS
T09292
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125637339 (TOPORS)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125637339 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccay03037
]
125637339 (TOPORS)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125637339 (TOPORS)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125637339 (TOPORS)
UBL E3 ligases
125637339 (TOPORS)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125637339 (TOPORS)
Cilium and associated proteins [BR:
ccay03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125637339 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
125637339
NCBI-ProteinID:
XP_048707652
LinkDB
All DBs
Position
5:complement(112613933..112622732)
Genome browser
AA seq
1075 aa
AA seq
DB search
MGDPLNYLTERGRRRRLRHGGEEPRAGPGPGPARCRRRQRLKAADTGQPRGEGEAPAPDG
GAANMTSTTEEFTVDSSFSPKAGTSKLHQTMPTDTSPDSKCPICLDRFDNVAYLDRCLHR
FCFRCVQEWSKNKAECPLCKQPFHSIFHTVRAEDDFKEYVLRPLQNGSFASPDGRRFRYR
TTLTRERHTSTYPRRSSSSRRTLSPPDNGILFEGLSGQPVGQRDGGIHQMIRRLASRRQA
SAEGRSLRQIQEQDIINFRRALYRSGVRVRNIQDGGRYRDISAEFFRMNPACLHRLVPWL
KRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFSDDLKPFLLHRTNHFLHEFISFAR
CPFNIEAYDQHANYDCPAPSYEEGSQSESSVITISPDETDSQEPDHNASTTSVDRAPWDD
ETPGPSYSSSEPVHVAMASPLDTSETSDEEPSRNGTELQGQLQDNAAPDGDTDTSSDNCV
IVGYVKPLAERTPELVELSSDSEESVDDGKSEDVKKPQPIQFHVFSVSDASGCSSPCSPI
SKDGKYSHKSSTSPSQKMKSKKNEKDTTKIKDLSTKDSLQSSSTRRDRMCSPCSHRLSRR
RRSRSSESYSQHSRNRDSHGQRTRRKHHSKERLKSRLSRSRDSSGHRTKRDKRRSKPRDI
SLSRKSQTVSLSSESTISRDVSRSRSRSNDHSRRRSRSRDSDHYYVRDNYQSRYQWEYTF
YSRNMDRDGYESSYRRRTQARAHYSRQSASPEYRIQSFSERTNTRNQRSHNESRYYYYER
RRSRSRSSNRSRTTSDRMRCEKPGGKRKYKTRHLENAHKENATSPCEGKGSDLQKSLSKY
SGCYKNQDSLLDNQASVGSRHKKRKKNTRSPSVEIIYEGKASDTTRHHKKKKKKHKKKHR
RHHTSNSSHSSPVVITIDSDSDKETGIQENTECDSSISWTTTTQFNERENETPSPVLGTS
DCKDEYTVDGESGLLDKDSSITTTRGDLGDDSGKVDRQFQETSNEQTLAVADDSSVSDMG
TLPRNVETIQTQSSSQLPSSRASFVENSERPPLILRLPKRLIDRSYWLDSPEKKM
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacccactgaattacctcacagagcgggggcgccgccgccgccttcgtcacggg
ggggaagagccgcgcgcgggtcccggcccgggccccgcccgctgccgccgccgccagaga
ctcaaagcggcggacacggggcagccccgcggggagggcgaagcgccggcaccggacggc
ggcgccgctaacatgacatcaacaactgaggagtttacggtggatagcagcttttcgcct
aaagctggcacaagcaagctgcatcagacaatgccaacagatacatctccagactctaaa
tgtccaatctgcttggacagatttgacaatgtggcctacttagatcgttgcttgcatagg
ttctgctttcgttgtgtacaggaatggtcaaaaaacaaagctgaatgtccactctgcaaa
cagcctttccattctatcttccatacagtgagagctgaagatgatttcaaggagtatgta
ctcaggcctttgcaaaatggctcttttgctagtcctgatgggcggagatttcgttaccgt
actacgttaacaagggaacgtcatacatcaacttatcctcgaaggagttcctcttctcga
agaacgctgtcacctccagataatgggatattatttgaaggattatctggtcaaccagtg
gggcaaagagatggaggaattcatcagatgattagacggcttgcatcaaggagacaagct
agtgcagagggtagatcactgcggcaaattcaagaacaagatataattaatttccgaaga
gctctgtatcgttctggtgtgcgtgttagaaatattcaagatggtggtcgttatagagac
atttcagctgagtttttccgcatgaaccccgcttgtcttcacagattagttccgtggctg
aagcgtgagctaacagtcctgtttggtgcccatgggtctctagtcaatattgtacagcat
atcatcatgagtaatgtgactagatatgatttggagagtcaggccttttctgatgactta
aagccttttttgctccatcgtactaaccactttttacatgaattcatcagctttgcccga
tgtccttttaacatagaggcatacgatcagcatgccaattatgattgtcctgctccttca
tatgaagaaggaagccagtcggaatcatcagttattacaatatctccagatgagacagat
tcccaagaaccagatcataatgcatctacaactagcgttgatcgggcaccttgggatgat
gaaactccagggccatcgtattctagctcagagccggttcatgttgccatggcttctcct
ttggatacttcggaaacttctgatgaagaacctagtagaaatggaactgaactgcaaggg
cagttacaagataatgcagccccagatggtgacactgatacttcttcagacaactgcgtc
attgttgggtatgttaagccattagctgaaagaacaccagaacttgttgagctgtcctca
gactctgaggagtcagttgatgatgggaaaagcgaggatgtgaagaaaccacagcctatc
cagtttcacgtttttagtgtcagtgatgctagtgggtgctcatcgccatgctctcctata
tctaaggatggtaaatatagccataaaagcagcacctcaccctcacaaaagatgaagtca
aaaaagaatgagaaagatacaactaaaataaaagatttgtctacaaaggactcattacaa
agttcctctacaagaagggataggatgtgctctccatgcagccacagattatccaggagg
aggagatcaaggagttcagaatcatattcacaacactctcgcaacagagacagccatgga
cagagaaccaggaggaaacatcacagcaaagaaaggttaaaaagtagactatcaagaagc
agagatagtagcggacataggaccaaaagagacaaaaggaggtcaaaacctcgagacata
agtttatctagaaaaagccagacagtgtctctaagtagtgagagcactatatctagagat
gtaagccggtcaagatcccggagtaatgatcatagcagaagaagatcgaggagcagagac
agtgatcattattatgtaagagataattaccaaagtaggtaccagtgggaatacactttt
tacagtagaaacatggacagagatggctatgaatcatcgtacaggaggagaactcaggcc
agagctcattattcaaggcagtcggctagtccagagtacagaatacagtctttttctgaa
aggacaaatactcgaaatcagagaagtcacaatgaaagccgatattattactatgaaaga
cgcagatcaaggagtcgatccagtaatagatctcggactacttctgatagaatgcgatgt
gaaaagcctggtggaaaaaggaaatacaaaactcgccacttggagaatgcacacaaggag
aatgcaacaagcccttgtgaagggaaaggaagtgacctccagaagtctttgtcaaaatac
agtggttgctacaaaaatcaggacagccttttagacaaccaagcaagtgttggcagtaga
cataaaaagaggaaaaaaaatacaagaagtccaagtgtagagattatttacgaaggaaaa
gctagtgacacaaccagacatcataaaaagaaaaagaaaaagcacaagaagaaacacagg
agacatcatacaagtaactcatcacattcttctccagttgtgattacaattgacagtgat
agtgataaggagactggaatacaagaaaatacagagtgtgacagtagtatctcttggaca
accacaacccagtttaatgagagagaaaatgagactccatcccctgtcctgggaacaagt
gattgtaaggatgagtacacagtagatggtgaaagtggactgttggacaaggattccagt
attactaccactaggggagacttaggtgatgactctggaaaggtagatcgccaatttcag
gaaacatcaaatgagcagactcttgcagtggcagatgatagtagtgtatctgacatggga
actctaccgagaaatgttgaaactatacaaactcaatcatccagtcagctgccgtcttcc
agagcatcatttgtagagaattcagagagaccacctttgatattaagactgccaaagaga
cttattgacagatcctactggcttgactccccagaaaaaaagatgtaa
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