Caretta caretta (Loggerhead turtle): 125637401
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Entry
125637401 CDS
T09292
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125637401 (TMC1)
03037 Cilium and associated proteins [BR:
ccay03037
]
125637401 (TMC1)
Transporters [BR:
ccay02000
]
Other transporters
Pores ion channels [TC:
1
]
125637401 (TMC1)
Cilium and associated proteins [BR:
ccay03037
]
Other cilia and associated proteins
Stereociliary proteins
125637401 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Motif
Other DBs
NCBI-GeneID:
125637401
NCBI-ProteinID:
XP_048707757
LinkDB
All DBs
Position
5:complement(91347855..91425422)
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AA seq
977 aa
AA seq
DB search
MPRHEKPTIIESAGMSPGGDMSQPSSFQPGVGIEVDNEEGSAAESEDDDSKIAHHDCEDE
EESEKEKKVTAKTRRGNARERARKDSEEEEETRTAGQHRQRNRRAQRKQAGNEDSDSDGE
SCKNKKNRENQISKQQEPNEDGEEDNKGGRKGRGKNETKQEKKPDEKGKKEKDNKKKDKK
KKGSSSSDSDSEEEPITEEELAKLKEEVEEKKKLIATLRNKPWQMKKKLDVLKEAQLFVE
KFEGALGKGKGKKFYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASY
FIFLRWMYGINMILFGLTFGLVMVPEVLMGKPYGTLPRKTVPRGEERTAMNFATLWDFSG
LAQYSVLFYGYYNNQRTIGWLKFRMPLSYFLVGVGTIAYSYMVVIRTMAKNANEEGGGDD
TSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAIVEEQENRKEENIHLTRFLRVLA
NFLALCTLAGSGYLIYFVVRRSQKFALEGLDNYGWWERNEVNMVMSLLGMFCPTLFDVIS
SLENYHPRIALRWQLGRIFALFLGNLYTFIIALMDEINLKLEEEKIVKYNMTIWEASLYN
GTISENATAPPIQVDPADIPRGPCWETMVGQEFVRLTISDTMTTYITIIIGDFLRAVFVR
FFNYCWCWDLEYGFPSYSEFDISGNVLGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYL
QCWAVMCCNVPHERVFKASRSNNFYMAMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKT
RMFEVISETLENDFPSWFGKVFNYASNPGLILPFILLMVLSIYYLNATSKSYKEANLDLK
KKLQSQAEENKKRNKQKAQQSREMEENSLEAKPKQQGSKQDSAADQGTQKGRGDKESKKK
TSHQQEASPSQQHGPGPNAHYSLHGRGGSLAPPPHIAVTRPPVPRGYGMSGYSPRNPRFE
GFPGGHPRMPRGTPNYR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcctagacacgaaaagccaaccatcattgagagtgctggcatgtcaccaggaggagac
atgtctcagccaagttcctttcaaccaggagtgggcattgaagttgacaatgaagaaggc
agtgcagctgagagcgaagatgatgacagcaaaatagcccatcatgattgtgaagatgaa
gaagaatctgaaaaagagaagaaagtaactgccaaaaccagaagaggaaatgccagagag
agagccagaaaggattcggaggaggaagaggagacaaggacagctgggcaacacagacag
agaaacaggagagcacagaggaaacaggctgggaatgaggacagtgattctgatggggaa
tcctgcaaaaacaagaagaacagggaaaatcagatatccaaacagcaggagcccaatgag
gatggagaagaagacaataaagggggcagaaaaggaagaggcaaaaatgagaccaaacag
gaaaaaaaacctgatgagaaagggaaaaaggagaaggacaacaagaaaaaggataaaaag
aagaaaggttcctcaagctctgactccgactctgaagaggagccaattacggaggaggaa
ttggccaagctgaaggaagaggtagaagagaaaaagaaactaattgccactttacgaaac
aaaccatggcagatgaaaaagaaactagacgtcctgaaggaagcccagctttttgtggaa
aaatttgaaggtgcacttggaaaaggaaaagggaaaaagttttatgcatacaaagtgatg
atgacaaagaaatggatgaaatttcaacgagattttgagaattttaaaacagcctgcata
ccatgggaaatgaaaatcaaagaaattgaaagtcatttcggctcttcagtagcttcttat
tttatattcttgcgctggatgtatggaataaatatgattctctttggattgacatttggc
cttgtaatggtgcctgaggtactgatggggaaaccatatggcacgttacctagaaaaact
gtcccgagaggtgaagaaagaactgctatgaattttgcaactttgtgggactttagtggc
cttgcacagtattctgtgctcttttacggctattacaacaaccagagaacaattggatgg
ctgaagttcaggatgcctctttcctatttccttgtgggagttgggaccattgcctatagc
tacatggttgtcatccgaacaatggcaaagaatgcaaatgaggaaggtggtggggatgat
acaagttttaatttcagctggaaaatgttcactagctgggattacctgatcggcaatcct
gaaacagcagataataagtttgcctcaatcacaacgagctttaaggaagctattgtggag
gagcaggagaaccgaaaagaagaaaacattcacctaacccgattcctgagagttcttgct
aacttcctggccctgtgcacactggccgggagtggttacctcatctattttgttgtgagg
agatcccagaagttcgccctggagggcctggataactatggctggtgggagagaaatgaa
gtgaacatggtcatgtctctcttgggaatgttctgcccgactttatttgatgtaatcagt
tctctggaaaattaccaccctcgaatagctctgagatggcaattggggcgcatctttgct
ctcttcttgggcaatctatacacattcatcattgccctgatggatgagatcaatctcaag
ctggaagaagagaagatagtgaagtataacatgacaatatgggaagccagcctctacaat
ggtacgatatcagaaaatgccactgctcctccaatacaggtggatcctgcagacatccct
agagggccatgttgggaaacaatggtagggcaggaatttgtgcgactgacaatctctgac
actatgacaacatacatcacaattataattggggatttcctgagagctgtctttgtcagg
tttttcaattactgctggtgctgggacttggagtatggatttccttcctattcagagttt
gatataagtggaaatgtgctgggactgatctttaaccaaggcatgatctggatgggttct
ttttacgctccatgcttgccagctatcaatgtgttccgtctccacacctcgatgtatctg
caatgctgggctgtgatgtgctgcaatgtccctcacgagagggtcttcaaagcctctaga
tccaataacttctacatggccatgctgctctttattctcttcctctctactctgcctgct
gtgtacactattgtctctatcccaccatcctttgactgcggcccattcagtgggaaaacc
agaatgtttgaggtcatttcagaaactttggagaatgacttcccttcctggtttggaaaa
gtatttaattatgcttctaaccctggactgatcctgcccttcatattgcttatggtattg
agtatctattatctcaatgctacatccaaatcctacaaggaagctaacttggatctcaaa
aagaagctacaaagtcaagctgaggaaaacaaaaagagaaacaaacaaaaagcacagcaa
tcacgggagatggaagaaaactcccttgaggctaaacccaagcagcaaggaagcaaacaa
gactctgcagcagatcaaggtacccagaaaggacgaggtgacaaagagtctaagaaaaag
accagccatcaacaggaagcaagcccctcccagcagcacggacctggcccaaatgctcat
tattccttgcatggcagaggaggaagccttgctccgcccccacacatagctgtgactcga
ccaccagtgccaagaggatatggcatgtccggctactcccccagaaatccacgctttgaa
ggttttcctggaggacacccaagaatgccaaggggcactcctaactatagataa
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