Caretta caretta (Loggerhead turtle): 125637425
Help
Entry
125637425 CDS
T09292
Symbol
SETDB2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00310
Lysine degradation
ccay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125637425 (SETDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125637425 (SETDB2)
Enzymes [BR:
ccay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
125637425 (SETDB2)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125637425 (SETDB2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125637425 (SETDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-HC5HC2H
Pre-SET
MBD
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
125637425
NCBI-ProteinID:
XP_048708194
LinkDB
All DBs
Position
1:complement(56112771..56210119)
Genome browser
AA seq
1257 aa
AA seq
DB search
MEEEKTVYTVPVTSECLDVETLSNVSGERGEGDAQMFWRQMEDERVDFIFEQVQNILLSL
KQKIKDGTATNEECFQALILVDRADGSNLLALTNVNDVTTEDGMQRSKPRLQPSISNENT
TGSPLMEAKEKSHSGNEDICSETRELPLKLCYQNHDCSNVCLANRPLNSYKGENPLKMPI
LCHFQRRHAKADLLSKSLDVNYKAPCGRSLRNFQDVQSYLFETECNFLFVDHFSFNTYVQ
LGRNTLNREALVFDFDISNGAESVPISFCNEVDNTRLPYFKYRKASWPRGYYLNNFSSMF
LDSCDCTDGCTDRSKCACLRLTAKGCNENSASPSNKASCGYRYKRLDGPVPSGIYECNLS
CKCDRMRCQNRVAQHGIQVRLQVFNTDRKGWGVRCLDDIDKGTFVCTYSGRLMSRAEPRE
IGDVDREAEKKDAVNEKSPSSLSVKRKLDTTCSDSEIELVQTGKDSINRRCETLSQPADD
EYKPVVVQKYGYNPRNLRSPAIRPKTRTAILQTRRLKLGVATLVHDASSDEDESSQPQPS
TKTKLTTGTKKEKEKLKLQEKLGEQEEAMQSEPSITDTAKSKEKRPSPEDARGGKSARLD
DTHAMKQSMDVIQRDGFKEEKNRRYTQDPLCNEEAEGDETHLKNSNKENIYLLDATKEGN
VGRFLNHSCCPNLFVQSVFVETHNRNFPWVAFFTNRHVKAGTELTWDYGYEAGSMPETEI
SCQCGVQKCRKKILSFYIGSLQLALLKVAQSPQQSAQVTPASAGPGPPPHSAGFHRQGEG
ERLARSASCVLTKARSPLHPQRQRPLGSGPEQARLSPQAGARQQRDTHQPTARAAAASAR
LPPSQLAPAGIRTLLFGPSQPAKVGSWRSLATPHPAPPRPHIASGRKRGHRQVQRLRRRL
ASMRTCADAWHMLSPRERAGSVRGSPSRARPFSGPSPSGVSRIVPCVEAEAAAQAANDSL
LPHPRCLSPGDFHIMEKMVKRKCAFCPADEECAIMYIAEKQNLAVHQNCLLYSSGFVESE
EHNPENQDTRFDVASVQSEIRRGKRLMCNFCRKKGATVGCEIKTCRRSYHYFCALCDDAA
LETDGGQGIYRVFCPKHDPGKRTNHYDADNKRNRHGMKSSTFTEKRSTEETAAENSLRLL
RKKHNKHKARIDFLRKCKQAGLLDGIFKEMLDTLHLAKEKLMDDNTSETEYEETVISLFD
CSLFENILTNVHSGTEEKLQELLETRKRLDTQIELLQDLKVIPFQENIASASSSVSE
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaaaaactgtttatactgtgcctgtcacatctgaatgcctggatgtggag
acccttagcaatgtcagtggcgagagaggtgaaggtgatgcacagatgttttggaggcaa
atggaagatgaaagagtggacttcatatttgagcaggtgcaaaacatattgctgtctctg
aaacaaaagatcaaggatggaactgcaacaaatgaagaatgcttccaagctttgatactg
gtggatagagctgatggaagcaatctcttagcattgacaaatgtaaacgatgtaactact
gaagatgggatgcagagaagcaaacctaggttacagccttctatatcaaatgaaaataca
acaggttctcctttaatggaggcgaaagaaaaatcacactcagggaatgaagacatatgt
agtgaaacaagggagttacctttaaaactatgttaccagaatcatgactgctctaatgta
tgtcttgccaacagaccactgaactcatacaagggagaaaaccctcttaaaatgccaatc
ctgtgtcatttccagagacgacatgcaaaagcagacttgctttcaaagtcacttgatgtg
aattataaggccccctgtgggaggagtctgagaaactttcaagatgtgcagagttacctg
tttgaaacagagtgcaacttcttatttgtcgatcacttttctttcaacacatacgtacag
ctgggcagaaacactctgaaccgagaagcacttgtatttgattttgatatcagcaatgga
gcagagtctgtacccatttccttctgtaacgaagttgacaacacaagattaccttatttt
aaatataggaaggcctcatggccacgtgggtactatctgaacaacttctctagcatgttt
cttgactcatgcgactgtacggatggctgcacagacaggtcaaaatgtgcgtgcctacgg
ctgactgcaaaaggctgcaatgaaaattctgcctcaccaagtaacaaagcatcttgtggt
tacaggtataaaaggctggatggacctgtccccagtggaatttacgaatgcaacttatcg
tgcaagtgtgacagaatgaggtgtcagaacagagtagcacagcatggtatccaagttcgg
ttgcaggtattcaacacagaccggaagggctggggcgtccgctgtctagacgatattgac
aaaggaacatttgtttgtacttattcaggcaggttaatgagcagagctgagcctcgggaa
ataggagatgtcgatcgtgaggccgaaaagaaggatgctgtgaatgaaaaaagtcccagc
tcactttcagtaaagagaaaactggacactacttgttcagattcggagattgaacttgtc
cagactggtaaagacagcattaacaggaggtgtgaaactttatctcagcctgcagatgat
gaatataaaccagttgtggttcagaaatatggatataatccaaggaatctgagaagccca
gccattaggcctaaaaccagaactgctattcttcagactcgccggctaaaactgggagtc
gctacattggtgcacgatgccagctcagatgaagatgagagttctcagccccagccgtca
accaaaacaaaactaaccacgggaaccaaaaaagaaaaggaaaaactcaaactgcaggaa
aagctaggagaacaagaggaggccatgcagtctgagccaagcatcacagatactgcaaaa
tctaaagaaaaaaggccatctccagaagatgcaagaggtggtaaatcagccaggctagat
gatacacatgctatgaaacagtccatggacgtaatccaaagagacggcttcaaagaggaa
aaaaataggagatacacacaagatccgctctgtaatgaggaggcagaaggtgatgagacc
catctgaagaattctaataaagaaaatatttatttattggatgccacaaaagaaggaaat
gtgggccgatttcttaatcatagctgctgcccaaatctctttgtacagagtgtttttgta
gagacgcacaacagaaatttcccttgggtggcattcttcacaaacaggcatgtgaaagct
ggaactgaactcacctgggattatggttatgaagctggaagcatgccagagacagagatc
tcctgtcagtgtggggttcagaagtgcaggaaaaaaatattatccttttacatcggctcc
ctccagcttgcgctgttgaaagtggcccaaagcccccagcagagcgctcaggtgactccc
gcatcagccgggccgggaccccccccccacagcgcgggatttcaccggcaaggtgaaggc
gagagattggcaagatccgcctcctgcgtcctcactaaggcgaggagtcccctgcacccc
cagaggcagcgcccgctcggcagcggccccgagcaagctcgcctcagcccccaggccggg
gcacggcaacagcgcgacacacatcagcctacagcccgggcggcggcggcgtccgccagg
ctgcctccatcgcagctggcgccagccgggattcgaaccctgctcttcggaccgtcccag
cccgcgaaggtaggaagctggcgcagcctcgccacgcctcaccccgcccctccgcggccc
catatcgcgtcaggcaggaagcgagggcaccgtcaggttcagcggcttcggcggcggtta
gcgagcatgcgcacttgcgcagatgcctggcacatgctcagtcccagggagcgagccggg
tcggtccgaggctctcccagccgggcacgcccattttctggcccctccccttcgggagtt
tctaggatcgtgccctgtgttgaggcagaagcagcagctcaggcggcgaatgattctctc
ctcccccacccccggtgtctctctccaggtgacttccacataatggagaagatggtaaaa
aggaagtgtgcattttgtccagcagatgaagagtgtgctataatgtacattgcagaaaag
cagaatcttgcagttcatcagaattgtttgttatattcctcaggatttgtagaatccgaa
gagcataacccagagaatcaggatacaaggtttgatgtggcctcagttcagagtgaaatc
aggagaggaaagcggctgatgtgcaacttctgtcgcaagaaaggagccactgtgggatgc
gagataaaaacctgccgcaggagttaccactacttttgtgcactgtgtgatgatgcagca
ttagaaactgatggagggcaaggaatttaccgagtgttctgtccaaaacatgacccaggc
aaaaggaccaatcattatgatgcagacaataagaggaacaggcatggaatgaaatcttcc
accttcacggaaaaaaggagcacggaagagacagcagcagaaaatagtttacgactttta
aggaaaaaacataacaaacacaaagcaagaatagactttcttaggaagtgcaagcaggct
ggacttctggatggtatatttaaagaaatgctagacacacttcaccttgcaaaggaaaaa
ctgatggatgacaacacttcagaaacagaatacgaggaaacagtaatatcactttttgac
tgtagcctgtttgaaaatatacttacaaatgttcattcaggaacagaggaaaaacttcag
gagcttctggaaacccggaaaagactggatactcagattgagctcctgcaagatttaaaa
gtaattcctttccaggaaaatatagctagtgcatctagttcagtgtctgaataa
DBGET
integrated database retrieval system
