Caretta caretta (Loggerhead turtle): 125637440 Help Entry 125637440         CDS       T09292                                  Symbol PCDH9 Name (RefSeq) protocadherin-9 isoform X1   KO K16498   protocadherin delta 1 Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:ccay00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     125637440 (PCDH9)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:ccay01009]     125637440 (PCDH9)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ccay04515]     125637440 (PCDH9) Protein phosphatases and associated proteins [BR:ccay01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      125637440 (PCDH9) Cell adhesion molecules [BR:ccay04515]  Cadherins   Protocadherins    125637440 (PCDH9) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Big_9 MAP17 V_ATPase_I EphA2_TM RCR DUF6249 7tm_3 DUF6377 Motif Other DBs NCBI-GeneID:  125637440 NCBI-ProteinID:  XP_048707814 LinkDB All DBs Position 1:complement(71790496..72696746) Genome browser AA seq 1225 aa AA seqDB search MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQALNFGDMP KYLWEIWVPDKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDE FYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQ QPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSGEAHFNTGNHMT DIPLANLKSYKQASGPAESPKEHQL NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atggacctgagggatttttacctgttggccgctctgattgcctgtttaaggctggattca gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc agccttgtctacagactggtttctaaagcaggggatgcccctttggtcaaagtgtccagc accaccggggaaatcttcaccacctctaatagaatagacagagaaaaactctgtgctgga gcctcctatgctgaagaaaatgagtgtttttttgaacttgaagtggtgattctccccaat gacttttttaggctgatcaaaataaaaataattgtaaaagataccaatgacaatgcacct atgtttccatcccctgtcattaatatttccatacctgaaaacacattgatcaacagccgc tttccaattccatcagcaactgatcctgacactggtttcaacggtgtacagcactatgaa ctgttaaatgggcagagtgtcttcggactggatattgttgaaactccagaaggagagaaa tggcctcaactgattgtacagcaaaacttggatagagagcagaaggacacctatgtgatg aaaatcaaagtagaggatggaggaacccctcagaaatccagcacagccatactgcaagtc acagtaagtgatgtcaatgataacaggccagtttttaaagagagtcaggtggaggttcac ataccagagaatgccccagtaggcacctctgtaattcagcttcatgctacagatgcagat gtaggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa aggctctttgctttaaataacacaacagggctgattacagttcagaggtccttagatcga gaagagactgctattcacaaagtgacagtgctggccagtgacggtagctctactcctgct cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc aggtacattataagtcccatcaatggcacagtatacttatctgagaaagatcctgtcaat acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc tgtttcattgagagagaggtcccatttcacttgaaggcagtttatgacaaccagtatttg ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt gcctctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa aacaaccgtcgtggtctatacttaacaactattagtgccacagacgaagacagtgggaaa aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag acgggagttttgacagcctccagagtttttgatagagaagagcaagaacgtttcattttc actgtaacagcaagggacaacggcacccctcctctgcagagtcaagcggctgtaattgtt actgtgctggatgaaaatgacaacagtcctaaatttactcataatcactttcagtttttt gtatctgagaacttaccaaagtatagcaccgtgggagtgatcacagtgaccgatgcagat gccggggaaaataaagcagtgaccctttccatcctgaatgataatgagaactttgtgctg gatccttactctggagttataaagtccaatgtttcttttgatcgagaacagcagagttcg tacacctttgatgtcaaggccattgatggaggacaacctcctcgctcttctacagcaaaa gtaacaataaatgtcatggatgttaatgataacagcccagttgtcatatacccaccttct aatacttcttttaagttggtgccactctcagcaatcccaggctctgtcgtagcagaagta tttgctgtggatatagacactggaatgaatgctgaacttaaatatacaattgtaagtgga aataacaaaggtttatttcgtattgatccagtgacaggtaatattactttggaagaaaaa ccagctcctactgatgtggggctgcatcgtttagtggtcaacataagtgacttgggttat cctaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat gcctcttatatttatgacttgatacgtaggactatggaaacacccttggacaggaatata ggggacagtagccaaccctatcaaaatgaggactatcttactatcatgattgctatagtg gcaggtgctatggttgtgatagtggtgatatttgtcacagttctggttcgctgtcgacat gcctctaggttcaaagcggcacaaaggagcaagcaaggtgctgaatggatgtctcccaat caggagaacaaacagaacaagaaaaagaaaaggaagaaaaggaagtctcctaaaagttct cttttgaactttgttaccattgaggagtcgaaacctgatgatgctgttcatgaacctatc aacgggacgataagccttccagctgagctggaggagcaaagtataggaagatttgactgg ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgctaagcattacaaa tctgcctctccacagtctgcttttcatcttaaacctgacactccagtatcagtgaaaaag catcatgtgattcaggaacttccattggacaacacctttgttggtggttgtgacaccctt tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga ggcttcaagacaaagggccccttacacaccagacaggcactgaattttggagatatgccg aagtacttgtgggagatttgggtacctgacaaaccgtgggtgtcccagcgccgtgttacg tttcacctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccatgag cctgtgggtagtggaaccctgatctcacatcctctccctctggttcagccacaggacgaa ttctacgaccaggcctcaccggacaagaggactgaagctgatggcaactctgaccccaac tctgatgggcctcttggtccacgaggattagctgaagctacagagatgtgtactcaagaa tgcctggttttgggtcactcagataactgttggatgcctcccagcctaggtccataccag cagccaaagtcgcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaa ctagtgaatggacacacgttgacaagaacctggaaagaagatagcaacagaaaccagttc agtgaccgaaagcagtatggctctggtgaggcccatttcaacactggcaatcacatgact gacattcctttggctaacttgaagtcttataaacaggcctcaggacctgctgagagtcca aaggagcaccagctataa

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