Caretta caretta (Loggerhead turtle): 125637539
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Entry
125637539 CDS
T09292
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03420
Nucleotide excision repair
ccay04115
p53 signaling pathway
ccay04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125637539 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
125637539 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
125637539 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125637539 (DDB2)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125637539 (DDB2)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125637539 (DDB2)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125637539 (DDB2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125637539
NCBI-ProteinID:
XP_048708053
LinkDB
All DBs
Position
6:54193519..54222078
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AA seq
525 aa
AA seq
DB search
MTPMATIGADRMTPENQSKDKKHVRVHEHQPEEDAKSTGKRKRDHGELETEPQAKRLFLR
KAAKPSGKIGWAEGGSMFRNSGVLFHQVERQCSIIHYIYQNMLGGSIRAQLRQCLQLPFV
RSLTSYRLFRTASPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLNKTCFIKGKGP
GDSLGGMKFSPFEAVKLYVASGDGTLSLQHLEGKAAQVISRTPGCGHEYHDVCFWYCSVD
VSASCRTVVTGDNVGNVVLLSTGGEEIWKLKLHKKKVTHVEFNSRCDWLLATASVDQTVK
IWDLRNIKDKSSFLHVLPHDKPVNAAYFSPTDGAKLLTTDQHSEIRVYSSSDWTKPQHLI
PHPHRQFQHLTPIKATWHPRYDLIVAGRYPDPKFPGYTVDELRTVDIFDGNTGEMACQLH
DPNASGIISLNKFNPMGDTLASGMGFNILIWSREEMVTKKQEHLLKAMTEQRSGSRSLSR
HGLQKQSNPLASKLKTKFLALELEGTKTKGKDPKSQGRKRKDLED
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaatggcaacaattggggcagacagaatgacccctgagaaccagtcaaaggac
aagaagcatgtgagggtgcatgagcatcagccagaggaagatgcaaaatcaactgggaag
aggaaacgagaccatggagaactggagactgagccgcaagcaaaaagattgtttctgaga
aaagcagccaagccctcagggaaaatcggctgggctgaaggtggttccatgttcagaaac
tcaggagtgctcttccatcaggtggagaggcagtgcagcatcatccactacatctaccaa
aacatgctgggtggctctatccgagcacagctcaggcagtgtctccagcttccctttgtg
cgttctcttacttcataccgcctcttccgaacagcaagtccctttgacaggagagtgaca
tgtctggagtggcatccaactcaccccagcactgtggctgtggggtccaaaggtggagac
atcatcctgtgggactacgaagtactgaataaaacctgtttcataaaagggaaagggcca
ggagactctcttggaggcatgaagttcagcccatttgaggcagtgaagctttatgtggca
tcaggggatggcacccttagtctgcagcatctggaaggcaaagcggcgcaggtgatctcc
cgcacgccaggctgtggccatgagtaccatgatgtttgtttctggtactgcagtgttgat
gtgtctgcaagctgccggaccgtggtgacaggtgataacgtgggtaatgtggtcctgctc
agcactggtggtgaagagatttggaagctgaagttacataagaagaaagtgactcatgtg
gagtttaactcgcgctgtgattggctcctggctacagcttctgtggaccagacagtcaaa
atctgggacctgagaaacatcaaagacaagtcaagtttccttcatgtgctgcctcatgac
aaacctgtcaatgctgcttatttcagcccaacggatggtgctaagctcctgaccacagac
cagcatagtgagatccgagtctattcctcttcagattggaccaaaccacagcatctgatc
ccacatccacatcggcagttccagcacctcacacctatcaaggcgacgtggcaccctcgt
tatgacctcattgtggctggtcgctacccagaccctaagttcccaggatacacagtggat
gagctgcgaactgttgatatatttgatggaaacactggggagatggcgtgccagctccac
gacccaaatgcatctggcattatctcgctcaataagtttaaccctatgggagatacactg
gcctctggtatgggctttaacattctgatctggagccgggaagagatggtgaccaagaaa
caggagcatctcttgaaagctatgacagagcagagaagtggaagccggagcttgtccagg
catgggctgcagaagcagtcaaacccactggcaagcaaactcaaaaccaagttccttgct
ctggaactagaggggactaaaacaaagggcaaagatcccaaatcacagggcaggaagcgg
aaggatctggaggattga
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integrated database retrieval system
