Entry |
|
Symbol |
PNN
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Name |
|
KO |
|
Organism |
ccay Caretta caretta (Loggerhead turtle)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ccay00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125637600 (PNN)
03015 mRNA surveillance pathway
125637600 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccay03019]
125637600 (PNN)
03041 Spliceosome [BR:ccay03041]
125637600 (PNN)
Messenger RNA biogenesis [BR:ccay03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125637600 (PNN)
Spliceosome [BR:ccay03041]
Complex C
Other components
EJC/TREX
125637600 (PNN)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
6:82981852..82995297
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AA seq |
693 aa
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLTITGPGGGRGRGSIL
LRRGFSDSGGPPAKQRDLEGATSRLGGERRTRRESRHESDAEDEDVKKPALQSSVVATSK
ERTRRDLIQDQTMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQA
EEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTRTRPHL
FYIPGRMCPATQKLIDDSQKKMNAIFENRRNEFAEQINKMEARPRRQSVKEKEQQEVHNE
EKKEEQNKEQEEGKVAQQVEEMETGNQNNDIEMEEAGEEKVKIGAGHSDAEREQEEEEEQ
KHEIEDKVEERGEVKENDRQQDSQHEEVMAVREEGESCQPVDNEQDMMEMNEADSVEPLE
SENSKEVAPEAECEAQPAKELDADSPEKETANKPEIEAEPEEKQEKEPQAQPEPEAEIQP
QPESVPLPQPPPLSQSIQDQEPRADQEEIAAVSVKLGELQSDQIQATSVEIKSKTRSRSR
GRTRNKTSKSRSRSSSTSTSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSS
SSTSSSESRSRSRGRGHNRDRKHRRSLDRKRRDASGLDRSHKSSKGSSRDTKGSKDKSSR
SDRKRSVSENSRSGKRTSRSERDRKSDRKDKRR |
NT seq |
2082 nt +upstreamnt +downstreamnt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaggccaaggagagcctcaag
cacgtggatgagaatatccgtaaactcacgggccgggaccccaacgatgtgaggcccgct
caaggtagattattgaccatcacaggccctggtggaggtagagggcgtggtagcatattg
ctaaggcgtggattctcggatagtggaggacccccagccaaacagagggatcttgaaggg
gcaaccagtaggctgggtggggaacgtcggacaaggagagaatcacgccatgaaagcgac
gcagaggatgaagatgttaaaaagccggcgttgcaatcttctgttgttgctacctccaaa
gagcgaacacgtcgagacctaattcaggatcaaactatggatgagaagggaaaacaaagg
aatcgacgtatatttggcttgttgatgggcactcttcagaaatttaaacaagaatccaca
gttgctactgagaggcaaaagagacggcaagaaattgaacaaaagcttgaagtgcaggca
gaggaggagagaaagcaggttgaaaatgagaggcgggaattgtttgaagaaaggcgtgct
aaacagacagaactgcgtctattggaacaaaaggttgaacttgctcaactgcaagaagaa
tggaatgaacataatgccaaaataattaaatatataagaaccaggacaaggccccatctc
ttctacatacctggcaggatgtgtcccgctacgcaaaagctaatagatgattcgcaaaaa
aaaatgaatgcaatatttgaaaatagacgcaatgagtttgcagaacaaattaacaaaatg
gaggccaggcccagaagacagtctgtaaaggaaaaagaacagcaggaggtgcataatgaa
gaaaagaaagaagagcagaacaaggagcaggaagagggtaaggtggctcagcaggtggaa
gagatggagacaggtaaccagaacaatgatatagaaatggaggaggcaggggaggaaaag
gtgaaaataggggcaggtcatagtgatgcagagagagaacaggaggaggaggaggagcag
aaacatgaaattgaggataaggtagaagagagaggtgaggtgaaggagaatgacaggcag
caggatagtcagcatgaagaggtcatggctgtaagagaggaaggtgagagttgtcagcca
gtggataacgagcaggatatgatggagatgaatgaggctgatagtgtagaaccattagaa
agtgaaaatagcaaggaagtggcaccagaagctgagtgtgaagctcagccagccaaagag
cttgacgctgattctcctgaaaaggagacagctaacaaaccagaaattgaagctgaacct
gaagagaaacaggaaaaggagcctcaagcccagccagagcctgaggcagagatacagccc
cagccagagtctgtgccactgccacagcctccaccattgtctcagtccattcaagatcaa
gagcctcgggcagaccaggaggaaattgctgcggtgtctgtaaagctgggtgagttgcaa
tctgatcagatccaggcgacgagcgtagaaattaagagtaaaactaggagtagaagcagg
ggtaggacaaggaacaagactagcaagagtcgaagtcgtagcagcagcactagtactagt
agtagtagctcaaccagcagtagcagcggcagcagttccagcagtggcagcagcagtagt
cggagtagttccagcagcagcagtagcacgagtggaagtagtagcagagacagtagcagc
agtagcactagcagcagtgagagcagaagtcgaagcagaggacggggtcataatagggat
agaaagcacagaaggagcttggataggaagcgaagggatgcttcaggactagacagaagt
cacaagtcttcgaaaggtagtagcagagatacaaaaggatcaaaggataaaagctcaagg
tctgacagaaagaggtctgtgtcagaaaatagtcggtcaggcaaaagaacttcacggagt
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa |