KEGG   Caretta caretta (Loggerhead turtle): 125637611
Entry
125637611         CDS       T09292                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04510  Focal adhesion
ccay04520  Adherens junction
ccay04530  Tight junction
ccay04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125637611 (ACTN1)
   04520 Adherens junction
    125637611 (ACTN1)
   04530 Tight junction
    125637611 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125637611 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccay04131]
    125637611 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccay04812]
    125637611 (ACTN1)
   04147 Exosome [BR:ccay04147]
    125637611 (ACTN1)
Membrane trafficking [BR:ccay04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    125637611 (ACTN1)
Cytoskeleton proteins [BR:ccay04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     125637611 (ACTN1)
Exosome [BR:ccay04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125637611 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   125637611 (ACTN1)
  Exosomal proteins of bladder cancer cells
   125637611 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI Uds1 FAZ1_C U3_assoc_6
Other DBs
NCBI-GeneID: 125637611
NCBI-ProteinID: XP_048708234
LinkDB
Position
6:complement(57946309..58076802)
AA seq 892 aa
MDYYDSQQTNDYMQPEEDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGSLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALLEEHTRQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIINYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYSGPDAVPGALDYMSFSTALYGESDL
NT seq 2679 nt   +upstreamnt  +downstreamnt
atggattactatgactctcagcaaaccaatgactacatgcagccggaggaggactgggac
agggacatgcttttggatccagcttgggaaaaacagcagagaaagacattcacagcatgg
tgtaactctcacctccgcaaggccggcacacagattgagaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct
gaaagaggcaaaatgcgagtgcacaaaatctccaatgtgaacaaggccctggatttcatt
gctagcaaaggagtgaagctggtgtctattggagcagaagaaattgtggatggaaatgtt
aaaatgacacttggaatgatctggaccatcatccttcgctttgccattcaggatatctct
gtggaagagacatctgctaaggaagggcttttgttatggtgtcagaggaagacagctccc
tacaaaaatgtgaacatccagaatttccatatcagctggaaggatggccttggcttctgt
gctttgattcacagacatcgcccagagctcatcgactatgggaagctgcgaaaggatgat
cctcttactaacctaaacacagccttcgacgtggctgagaagtatctggacatccccaag
atgttggatgcagaagacattgttggaactgcccgccctgacgagaaagccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagccaat
cgtatctgcaaggtgttggcagtcaatcaggagaatgaacagctcatggaagactatgaa
aagctggccagtgatctgctggaatggatccgccgcaccattccttggctggagaatcgg
gcgcctgagaacactatgcaagccatgcagcagaaactggaggatttccgggactaccgc
cgcctgcacaagccccccaaggtccaggagaagtgccagcttgaaatcaatttcaatacc
ttgcagaccaagctgcggctcagcaacaggccagcattcatgccttcagaggggaaaatg
gtctcggacataaacaatgcatggggaagcctagaacaggctgagaagggctatgaggaa
tggctgttgaatgagatccgaaggctagagaggctggatcacctggctgagaagttccgg
cagaaagcttccattcacgagtcctggacagatggtaaggaggcaatgctgcagcagaag
gattatgaaactgctacgctgtcagagataaaggccctgctgaagaaacatgaggccttt
gagagcgacctagctgctcaccaggaccgtgtggagcagattgctgctattgcacaagaa
ctcaatgagctggattattatgactcaccaagtgtcaacgccaggtgccagaagatatgt
gaccaatgggacaatctgggtgctttaacccagaaacgtagagaggccttggagaggaca
gagaagctgctggagacaattgaccagctatacctggaatatgcaaaacgagccgctcct
ttcaataactggatggagggggccatggaggatctgcaggacaccttcattgttcatacc
atagaggagatccagggattgaccacagcccatgaacagttcaaggccactttgccagat
gccgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtccag
acctaccatgtcaacatggcaggaaccaatccctacacgaccatcaccccacaggaaatc
aatggcaaatgggaccacgtgcggcagttagttcctcgaagggatcaagccctgctggaa
gagcacacacgccagcaacaaaatgaacgactccggaaacagtttggcgcacaggctaat
gtcatagggccctggatccaaaccaagatggaggagatcggccgcatttccatagagatg
catgggaccctggaggaccagctcaaccacctccggcagtacgagaagagcattattaat
tacaaaccaaagattgaccagctggagggagaccaccagcagattcaggaggcactcatc
tttgacaacaagcacaccaactacaccatggagcatatccgagtgggatgggagcagttg
cttacaacaattgctagaaccatcaatgaagtggaaaatcagattctgacccgtgatgcc
aaagggatcagccaggagcagatgaatgaattccgggcctcctttaaccattttgacagg
gatcactccggcacacttggccctgaggaattcaaagcctgcctcatcagcttgggttac
gatattggaaacgatgcacagggagaagcagagtttgcccgcatcatgagcattgtagat
cccaaccgcttgggtgtagtgacattccaggcctttatcgacttcatgtcccgggaaaca
gcagatactgatactgctgaccaggtcatggcttccttcaagattctggctggagacaag
aactacatcactgtggatgaattacgacgggaactgcctcctgatcaagctgaatattgc
attgctaggatggcaccatacagtgggcctgatgctgtacctggtgccctggactatatg
tccttctccacagcgctctatggcgaaagtgacctttaa

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