Caretta caretta (Loggerhead turtle): 125637611 Help Entry 125637611         CDS       T09292                                  Symbol ACTN1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay04510   Focal adhesion ccay04517   IgSF CAM signaling ccay04518   Integrin signaling ccay04519   Cadherin signaling ccay04520   Adherens junction ccay04530   Tight junction ccay04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:ccay00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     125637611 (ACTN1)    04518 Integrin signaling     125637611 (ACTN1)    04519 Cadherin signaling     125637611 (ACTN1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125637611 (ACTN1)    04520 Adherens junction     125637611 (ACTN1)    04530 Tight junction     125637611 (ACTN1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     125637611 (ACTN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccay04131]     125637611 (ACTN1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:ccay04812]     125637611 (ACTN1)    04147 Exosome [BR:ccay04147]     125637611 (ACTN1) Membrane trafficking [BR:ccay04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     125637611 (ACTN1) Cytoskeleton proteins [BR:ccay04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      125637611 (ACTN1) Exosome [BR:ccay04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    125637611 (ACTN1)   Exosomal proteins of colorectal cancer cells    125637611 (ACTN1)   Exosomal proteins of bladder cancer cells    125637611 (ACTN1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI Uds1 FAZ1_C U3_assoc_6 Motif Other DBs NCBI-GeneID:  125637611 NCBI-ProteinID:  XP_048708234 LinkDB All DBs Position 6:complement(57946309..58076802) Genome browser AA seq 892 aa AA seqDB search MDYYDSQQTNDYMQPEEDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM VSDINNAWGSLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI NGKWDHVRQLVPRRDQALLEEHTRQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM HGTLEDQLNHLRQYEKSIINYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK NYITVDELRRELPPDQAEYCIARMAPYSGPDAVPGALDYMSFSTALYGESDL NT seq 2679 nt NT seq  +upstreamnt  +downstreamnt atggattactatgactctcagcaaaccaatgactacatgcagccggaggaggactgggac agggacatgcttttggatccagcttgggaaaaacagcagagaaagacattcacagcatgg tgtaactctcacctccgcaaggccggcacacagattgagaacatagaggaagatttcagg gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct gaaagaggcaaaatgcgagtgcacaaaatctccaatgtgaacaaggccctggatttcatt gctagcaaaggagtgaagctggtgtctattggagcagaagaaattgtggatggaaatgtt aaaatgacacttggaatgatctggaccatcatccttcgctttgccattcaggatatctct gtggaagagacatctgctaaggaagggcttttgttatggtgtcagaggaagacagctccc tacaaaaatgtgaacatccagaatttccatatcagctggaaggatggccttggcttctgt gctttgattcacagacatcgcccagagctcatcgactatgggaagctgcgaaaggatgat cctcttactaacctaaacacagccttcgacgtggctgagaagtatctggacatccccaag atgttggatgcagaagacattgttggaactgcccgccctgacgagaaagccatcatgacc tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagccaat cgtatctgcaaggtgttggcagtcaatcaggagaatgaacagctcatggaagactatgaa aagctggccagtgatctgctggaatggatccgccgcaccattccttggctggagaatcgg gcgcctgagaacactatgcaagccatgcagcagaaactggaggatttccgggactaccgc cgcctgcacaagccccccaaggtccaggagaagtgccagcttgaaatcaatttcaatacc ttgcagaccaagctgcggctcagcaacaggccagcattcatgccttcagaggggaaaatg gtctcggacataaacaatgcatggggaagcctagaacaggctgagaagggctatgaggaa tggctgttgaatgagatccgaaggctagagaggctggatcacctggctgagaagttccgg cagaaagcttccattcacgagtcctggacagatggtaaggaggcaatgctgcagcagaag gattatgaaactgctacgctgtcagagataaaggccctgctgaagaaacatgaggccttt gagagcgacctagctgctcaccaggaccgtgtggagcagattgctgctattgcacaagaa ctcaatgagctggattattatgactcaccaagtgtcaacgccaggtgccagaagatatgt gaccaatgggacaatctgggtgctttaacccagaaacgtagagaggccttggagaggaca gagaagctgctggagacaattgaccagctatacctggaatatgcaaaacgagccgctcct ttcaataactggatggagggggccatggaggatctgcaggacaccttcattgttcatacc atagaggagatccagggattgaccacagcccatgaacagttcaaggccactttgccagat gccgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtccag acctaccatgtcaacatggcaggaaccaatccctacacgaccatcaccccacaggaaatc aatggcaaatgggaccacgtgcggcagttagttcctcgaagggatcaagccctgctggaa gagcacacacgccagcaacaaaatgaacgactccggaaacagtttggcgcacaggctaat gtcatagggccctggatccaaaccaagatggaggagatcggccgcatttccatagagatg catgggaccctggaggaccagctcaaccacctccggcagtacgagaagagcattattaat tacaaaccaaagattgaccagctggagggagaccaccagcagattcaggaggcactcatc tttgacaacaagcacaccaactacaccatggagcatatccgagtgggatgggagcagttg cttacaacaattgctagaaccatcaatgaagtggaaaatcagattctgacccgtgatgcc aaagggatcagccaggagcagatgaatgaattccgggcctcctttaaccattttgacagg gatcactccggcacacttggccctgaggaattcaaagcctgcctcatcagcttgggttac gatattggaaacgatgcacagggagaagcagagtttgcccgcatcatgagcattgtagat cccaaccgcttgggtgtagtgacattccaggcctttatcgacttcatgtcccgggaaaca gcagatactgatactgctgaccaggtcatggcttccttcaagattctggctggagacaag aactacatcactgtggatgaattacgacgggaactgcctcctgatcaagctgaatattgc attgctaggatggcaccatacagtgggcctgatgctgtacctggtgccctggactatatg tccttctccacagcgctctatggcgaaagtgacctttaa

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