Caretta caretta (Loggerhead turtle): 125637620
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Entry
125637620 CDS
T09292
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125637620 (TBC1D4)
Membrane trafficking [BR:
ccay04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125637620 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125637620 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
125637620 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
DUF2226
TMPIT
Motif
Other DBs
NCBI-GeneID:
125637620
NCBI-ProteinID:
XP_048708259
LinkDB
All DBs
Position
1:complement(78577772..78734844)
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AA seq
1274 aa
AA seq
DB search
MEKQGQDETLPHPLEPEPQPVGRAMGEKRFKLWYVGWSCLDRRTTLPMLPWLMAEIRRRS
QRQDPGGPLGSSVPAREVQLLLGFPNLRCVPATSSGSPGSANPAVFIFEHKAQHISRFIH
NSHDLTYFAYLIKAQPDNPESQVACHVFRASDPNQVPDVISSIRQVSKAALKEDAKPGKD
SEDAFYNSQKFEVLYCGKVTVAHKKAPSTLIDECIEKFSLHERQRLKLLSEQRSTDSSSD
LTLYEGDVPASLSDSPFEELDGTSTTTGHTGIFTIGGQTNLAGTRVSFPERILEDSGFDE
QQEFRSRCNSVTAVMQRKVHDTSLKTQPRRRHASAPSHVQPSDSEKNRTMLFQVGRFEIN
LISPDTKSVVLEKNFKDISSCSQGIQHVDHFGFICRESIEPGINQYVCYVFQCASESLVD
EVMLTLKQAFSTAAALQNAKTQIKLCEACPMHSLHKLCERIEGLYPPRAKLVIQRHLSSL
TDNEQADIFERVQKMKPVNDQEENELVILHLRQLCETKQKTHVHIGEAPLNISNSAIPEN
TASSGRFKLDILKNKAKKSLTSSLENIFSRGASRMRGRLGSMDSFERCSSLTSDKDCSPG
DSPPATPPASPVSSVWQPFPEEDSDSPQFRRRAHTFSHPTSSVKKRITFQDGRSQSVKSP
LLRQNSIEQSSPVPVARRRYRSESGLPSSFSAPSFLKSFYQSSGRLLQQSENDVSKSDGE
GRKRTSSVCSNESVNASGVTLTPRRISWRQRIFLRVASPMNKSPSTMQHQDGLEGNELLP
LSPLAPALEEDPLSLILQNEDAPDKAGGRKKSEELQSLWRKAIHQQILLLRMEKENQKLE
ASRDELQSRKVKLDYLEVGTCQKDVINIWDKKLLNCRAKIRCEMEDIHTTLKEGVPKSRR
GEIWQFLAVQHRVRHGLPSKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSTQL
GAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQY
RPDMMSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFPLGFVARV
FDIIFLQGTEVIFKVALSLLSSQEALVMECESFENIVDFLKGTIPDMTKLQMEKIITQVF
EMDISKQLHAYEVEYHVLQDELQEGLNPCDDVEPLEKLERANSQLKRQNMDLLEKLQIAH
AKIQSLESNLENILSRENKMRSLIQSLEQEKMAYQKTVEQISKYLPVEALSDCELFLKEV
NANPNNKTKQGNKP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagggtcaggacgagacgctccctcacccgctggagccggagccgcagccg
gtggggagggcgatgggggagaagcggttcaagctgtggtatgtgggttggtcctgcctg
gacagacggaccacgctgcccatgctgccctggctgatggccgagatccgcaggcgcagc
caaaggcaggaccctggcggacccctgggtagctcggtgcccgcccgggaggtgcagctg
ctcctgggcttcccgaacctccgctgcgtccccgccacctccagcggcagcccgggcagc
gccaacccggccgtcttcatcttcgagcacaaggcgcagcacatctcccgcttcatccac
aacagccacgacctcacctacttcgcctacctgatcaaggcgcagcccgacaaccccgag
tcacaggtggcctgccacgtcttccgggcctctgaccccaaccaggttcctgatgtgatc
agcagcataaggcaagtgtccaaagcagccctgaaagaggatgccaagcctggtaaggat
agtgaagatgccttctacaattcccaaaaatttgaggttttgtactgtggaaaggtgact
gtggcccataagaaagccccctccactctaattgatgagtgcattgagaaattcagccta
catgagcgccagcgcctgaaactgttgagtgagcagcggagcacagattccagctcagac
ttaaccttgtatgaaggagacgtgccagcttctctgtcagatagtccatttgaggagcta
gatggcacgagcaccaccaccgggcacacggggatctttacaattggaggccagaccaat
ctggctggcacccgtgtctctttccccgagcgaattttggaggattctggctttgatgag
cagcaggaattccgctcccggtgcaacagcgtcactgcagttatgcaaaggaaggttcat
gataccagcctgaaaacacagccacgcaggagacatgcaagtgcacccagtcatgttcaa
ccctcagactctgagaagaacagaacaatgctgtttcaggttggacgatttgaaattaac
cttatcagcccagacaccaaatctgttgtgcttgaaaagaattttaaagatatctcctca
tgttctcagggtatacaacatgttgatcactttggttttatttgtcgggaatctattgaa
cctgggataaaccagtatgtttgctacgtgttccagtgtgcaagtgaatctttggttgat
gaggtaatgcttaccctgaaacaagcctttagcactgctgcagctctacagaatgccaag
actcagattaaactgtgtgaggcctgtcctatgcactcattgcataaactctgtgaaagg
attgaaggtctttacccaccaagagccaaacttgtaattcagagacacctgtcatcactt
actgataatgagcaagcagacatttttgaacgtgttcagaaaatgaagcctgtcaatgac
caggaagaaaatgagcttgtgatcttacatctgcgacagttgtgtgaaactaaacaaaag
actcatgtccatattggcgaggcaccattgaacatttcaaacagtgcaatcccagaaaac
actgccagcagtggccggtttaaactcgacattctgaaaaacaaggccaagaaatccttg
actagttctctggaaaacatcttctcaaggggagctagcagaatgcgaggccgtctgggc
agcatggacagctttgaacggtgcagcagccttacttctgacaaggactgttcacccggg
gattctcctccagccactcctccagcttcccccgtgtcctcggtctggcagccatttccc
gaagaggactctgattctcctcagtttagaaggcgtgcacatactttcagccatccaacg
tccagtgtcaagaagaggattactttccaggacgggaggtcccagagtgttaagtctcca
cttctgagacagaattctatagagcagagcagtcctgtgcctgtagcccgacgacgatat
cgtagtgagagtggacttccctcttccttctctgccccctctttcctgaaaagcttttac
cagagctcaggcaggctgctccagcagtctgaaaatgacgtttccaagagtgatggggag
ggaaggaaaaggacctcatccgtctgcagcaacgagtctgtaaatgccagcggggtcact
cttaccccccgccgcatctcctggcggcagcgaatcttcctgcgggttgcttcacccatg
aacaaatctccctcaacaatgcagcatcaagatgggcttgaggggaatgaattgttgcca
ctgtcccctcttgctccagccttggaggaggaccctctttctttgatattgcaaaatgag
gatgccccagataaggctggcgggaggaaaaaatcggaagagttgcagagtctgtggaga
aaagctatccatcaacaaatcctactgcttcgaatggaaaaagaaaaccagaagctggaa
gcaagcagagatgaactccaatcaagaaaagttaaattggactaccttgaagttggtaca
tgtcagaaagatgtcataaatatctgggataagaagttattaaactgcagagccaaaatc
agatgtgaaatggaggatattcataccactctgaaagaaggtgtaccaaaaagccgccgg
ggagaaatttggcaatttctagctgtacaacatcgcgtaagacatggactgccaagcaaa
caacaacctcctgacatctcgtacaaagaactcttgaaacagctgacagctcagcaacat
gctatccttgtagatctaggcaggacattccctacacatccttacttctctacccagctg
ggagcagggcagctgtcactctttaatctcctgaaagcttattctttgctggacaaggaa
gtgggttattgccaaggtatcagctttgtggctggagtactgcttctacacatgagtgag
gagcaagcctttgaaatgctgaaattcctcatgtatgatcttggcttccgtaaacagtac
aggccagacatgatgtcactacagattcagatgtatcaactttcaagactcctccatgac
tatcacagagacctctataatcatcttgaagagaacgaaatcagccccagtctttatgct
gcaccctggtttctcacgttgtttgcatctcagtttccgttaggatttgtagccagagtt
tttgacattatctttcttcaaggaactgaagtcatatttaaggtagctctgagtctactt
agcagccaagaagcacttgtaatggaatgcgagagctttgagaatattgttgatttcctt
aaaggcactatcccagacatgactaagcttcaaatggaaaagattattacccaggttttt
gagatggatatttccaaacagcttcatgcatatgaagtagagtaccatgtactacaggat
gagctgcaggaaggtttaaatccctgtgatgatgttgaacctttggagaaattggagagg
gccaacagtcagctaaagaggcaaaatatggacttgttggagaagctacagatagctcat
gctaaaattcagagtctggaatccaacctggaaaacatattgtctcgagagaacaaaatg
aggagcttaatccagtcgctggaacaggaaaagatggcatatcaaaagactgttgagcaa
ataagtaaatacctgccagtagaagcactgtccgactgtgaactgttcttgaaggaagta
aatgccaacccaaacaataaaacaaagcaaggaaataagccataa
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